Cow genome map


           Conread name:
           rpigcb_9829.y1
        

               Conread position:
               221-378
               

               Cow position:
               chr9:21462886-21462734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 93
               

               Conread position:
               221-497
               

               Cow position:
               chr9:20839608-20839886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               66, 129
               

               Conread position:
               221-504
               

               Cow position:
               chr9:58204653-58204942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 81
               

               Conread position:
               224-445
               

               Cow position:
               chr9:34204112-34204331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               225-510
               

               Cow position:
               chr9:20039147-20038876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               51, 46
               

               Conread position:
               226-509
               

               Cow position:
               chr9:43911912-43912213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 73
               

               Conread position:
               236-491
               

               Cow position:
               chr9:38193008-38193266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               71, 81
               

               Conread position:
               236-511
               

               Cow position:
               chr9:43037481-43037769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               237-490
               

               Cow position:
               chr9:2114007-2113740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 46
               

               Conread position:
               237-526
               

               Cow position:
               chr9:41958786-41958493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               99, 50
               
Show alignments to all cow chromosomes.