Non-Coding RNA Search

Cow genome map


           Conread name:
           rpigcf0_008845.y1
        

               Conread position:
               6-508
               

               Cow position:
               chr13:43194485-43193984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 60
               

               Conread position:
               11-486
               

               Cow position:
               chr13:32535959-32535490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 17
               

               Conread position:
               12-506
               

               Cow position:
               chr13:9125980-9125486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 127
               

               Conread position:
               12-508
               

               Cow position:
               chr13:9803364-9802881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 100
               

               Conread position:
               12-508
               

               Cow position:
               chr13:34761980-34761497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               318
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               68, 179
               

               Conread position:
               13-449
               

               Cow position:
               chr13:32283425-32282999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               298
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               90, 24
               

               Conread position:
               15-408
               

               Cow position:
               chr13:30651479-30651100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 138
               

               Conread position:
               15-434
               

               Cow position:
               chr13:6153475-6153898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 171
               

               Conread position:
               15-434
               

               Cow position:
               chr13:36771118-36771534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 143
               

               Conread position:
               15-449
               

               Cow position:
               chr13:38329936-38329487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               16-290
               

               Cow position:
               chr13:16270239-16269951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               16, 127
               

               Conread position:
               16-294
               

               Cow position:
               chr13:60690416-60690703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               16-295
               

               Cow position:
               chr13:6606717-6607000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               88, 210
               

               Conread position:
               16-309
               

               Cow position:
               chr13:6945676-6945377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               93, 211
               

               Conread position:
               16-312
               

               Cow position:
               chr13:6664440-6664143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               101, 276
               

               Conread position:
               16-337
               

               Cow position:
               chr13:37980348-37980660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               93, 73
               

               Conread position:
               16-338
               

               Cow position:
               chr13:20378039-20378354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               152, 14
               

               Conread position:
               16-343
               

               Cow position:
               chr13:562834-563164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               80, 212
               

               Conread position:
               16-343
               

               Cow position:
               chr13:1767072-1766744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 79
               

               Conread position:
               16-343
               

               Cow position:
               chr13:20863715-20864037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               61, 53
               

               Conread position:
               16-343
               

               Cow position:
               chr13:25248841-25249179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               99, 281
               

               Conread position:
               16-346
               

               Cow position:
               chr13:37945917-37946230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               131, 92
               

               Conread position:
               16-354
               

               Cow position:
               chr13:5091359-5091702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 24
               

               Conread position:
               16-363
               

               Cow position:
               chr13:47313206-47312875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               329, 92
               

               Conread position:
               16-367
               

               Cow position:
               chr13:40813432-40813079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               101, 250
               

               Conread position:
               16-369
               

               Cow position:
               chr13:19178576-19178224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 51
               

               Conread position:
               16-373
               

               Cow position:
               chr13:670927-671288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               95, 252
               

               Conread position:
               16-373
               

               Cow position:
               chr13:5498117-5497760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               101, 125
               

               Conread position:
               16-373
               

               Cow position:
               chr13:24931133-24930773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               86, 290
               

               Conread position:
               16-397
               

               Cow position:
               chr13:21039300-21039675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 45
               

               Conread position:
               16-402
               

               Cow position:
               chr13:37516831-37517220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 292
               

               Conread position:
               16-402
               

               Cow position:
               chr13:42114320-42113938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 34
               

               Conread position:
               16-408
               

               Cow position:
               chr13:45604109-45604504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               281
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               61, 232
               

               Conread position:
               16-411
               

               Cow position:
               chr13:34941354-34941741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 170
               

               Conread position:
               16-412
               

               Cow position:
               chr13:12045038-12045430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 68
               

               Conread position:
               16-415
               

               Cow position:
               chr13:53536000-53536403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 31
               

               Conread position:
               16-419
               

               Cow position:
               chr13:1042653-1043068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 289
               

               Conread position:
               16-421
               

               Cow position:
               chr13:26382928-26383336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 275
               

               Conread position:
               16-427
               

               Cow position:
               chr13:10988771-10989177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 92
               

               Conread position:
               16-427
               

               Cow position:
               chr13:25531487-25531897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 80
               

               Conread position:
               16-434
               

               Cow position:
               chr13:152246-151849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               16-434
               

               Cow position:
               chr13:17622587-17622175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 151
               

               Conread position:
               16-434
               

               Cow position:
               chr13:18835489-18835090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 169
               

               Conread position:
               16-439
               

               Cow position:
               chr13:18351146-18350717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 148
               

               Conread position:
               16-442
               

               Cow position:
               chr13:34263079-34263491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               333, 14
               

               Conread position:
               16-442
               

               Cow position:
               chr13:46516365-46515939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 45
               

               Conread position:
               16-448
               

               Cow position:
               chr13:17158561-17159006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 217
               

               Conread position:
               16-448
               

               Cow position:
               chr13:20879534-20879952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 54
               

               Conread position:
               16-448
               

               Cow position:
               chr13:28683657-28683234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 29
               

               Conread position:
               16-448
               

               Cow position:
               chr13:37981449-37981872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 97
               

               Conread position:
               16-448
               

               Cow position:
               chr13:55843787-55843358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 207
               

               Conread position:
               16-448
               

               Cow position:
               chr13:60429776-60430206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 138
               

               Conread position:
               16-449
               

               Cow position:
               chr13:2774421-2773998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 45
               

               Conread position:
               16-449
               

               Cow position:
               chr13:6974468-6974033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 148
               

               Conread position:
               16-449
               

               Cow position:
               chr13:12875682-12876101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 138
               

               Conread position:
               16-449
               

               Cow position:
               chr13:13089326-13088901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 209
               

               Conread position:
               16-449
               

               Cow position:
               chr13:13321083-13320668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               73, 125
               

               Conread position:
               16-449
               

               Cow position:
               chr13:15869420-15868985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 50
               

               Conread position:
               16-449
               

               Cow position:
               chr13:20666085-20666515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 188
               

               Conread position:
               16-449
               

               Cow position:
               chr13:26479914-26480333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 45
               

               Conread position:
               16-449
               

               Cow position:
               chr13:35525911-35526324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               294
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               94, 153
               

               Conread position:
               16-449
               

               Cow position:
               chr13:42229622-42229184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 54
               

               Conread position:
               16-451
               

               Cow position:
               chr13:37483967-37484410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 209
               

               Conread position:
               16-452
               

               Cow position:
               chr13:32017220-32017644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 209
               

               Conread position:
               16-473
               

               Cow position:
               chr13:7663126-7663571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 130
               

               Conread position:
               16-506
               

               Cow position:
               chr13:47007436-47007916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 44
               

               Conread position:
               16-507
               

               Cow position:
               chr13:15446347-15445845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               514
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 33
               

               Conread position:
               16-507
               

               Cow position:
               chr13:32166999-32167498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 265
               

               Conread position:
               16-507
               

               Cow position:
               chr13:51941032-51940542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 94
               

               Conread position:
               16-508
               

               Cow position:
               chr13:661334-661824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 16
               

               Conread position:
               16-508
               

               Cow position:
               chr13:8838694-8839169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 45
               

               Conread position:
               16-508
               

               Cow position:
               chr13:12233155-12233641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 62
               

               Conread position:
               16-508
               

               Cow position:
               chr13:25434826-25435311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 158
               

               Conread position:
               17-312
               

               Cow position:
               chr13:50079054-50078756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 267
               

               Conread position:
               17-373
               

               Cow position:
               chr13:645613-645971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               100, 288
               

               Conread position:
               17-395
               

               Cow position:
               chr13:1155406-1155777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 204
               

               Conread position:
               17-409
               

               Cow position:
               chr13:44626676-44626279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               274
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               92, 28
               

               Conread position:
               17-449
               

               Cow position:
               chr13:6616446-6616888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 229
               

               Conread position:
               17-449
               

               Cow position:
               chr13:9142584-9142152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 144
               

               Conread position:
               17-449
               

               Cow position:
               chr13:12546601-12547037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 97
               

               Conread position:
               17-452
               

               Cow position:
               chr13:12448686-12449118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 104
               

               Conread position:
               17-463
               

               Cow position:
               chr13:3015868-3016316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 46
               

               Conread position:
               17-508
               

               Cow position:
               chr13:17820958-17821463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               509
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 212
               

               Conread position:
               18-307
               

               Cow position:
               chr13:61170423-61170711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               93, 47
               

               Conread position:
               18-393
               

               Cow position:
               chr13:41253927-41253549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 124
               

               Conread position:
               18-433
               

               Cow position:
               chr13:31814164-31813763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 27
               

               Conread position:
               18-443
               

               Cow position:
               chr13:311733-311315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 205
               

               Conread position:
               18-446
               

               Cow position:
               chr13:44202290-44201883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 156
               

               Conread position:
               18-449
               

               Cow position:
               chr13:20175040-20174612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 134
               

               Conread position:
               18-449
               

               Cow position:
               chr13:21276156-21275730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 232
               

               Conread position:
               18-449
               

               Cow position:
               chr13:27524962-27525389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 6
               

               Conread position:
               18-449
               

               Cow position:
               chr13:37382112-37381672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 166
               

               Conread position:
               18-449
               

               Cow position:
               chr13:60974376-60973951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 92
               

               Conread position:
               18-451
               

               Cow position:
               chr13:11260547-11260144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 19
               

               Conread position:
               18-503
               

               Cow position:
               chr13:57493883-57494373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 207
               

               Conread position:
               18-508
               

               Cow position:
               chr13:17886794-17886330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 27
               

               Conread position:
               20-297
               

               Cow position:
               chr13:34556050-34556315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 41
               

               Conread position:
               20-448
               

               Cow position:
               chr13:25695469-25695895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 265
               

               Conread position:
               21-408
               

               Cow position:
               chr13:52284207-52283824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               271
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               93, 173
               

               Conread position:
               21-434
               

               Cow position:
               chr13:45353340-45352918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 87
               

               Conread position:
               21-508
               

               Cow position:
               chr13:25537939-25537432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 139
               

               Conread position:
               22-505
               

               Cow position:
               chr13:12521487-12521963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 82
               

               Conread position:
               27-279
               

               Cow position:
               chr13:38485119-38484870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               84, 34
               

               Conread position:
               27-449
               

               Cow position:
               chr13:38872683-38873073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               296
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               82, 25
               

               Conread position:
               28-508
               

               Cow position:
               chr13:9974775-9975273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 63
               

               Conread position:
               29-357
               

               Cow position:
               chr13:5752134-5752464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               29-435
               

               Cow position:
               chr13:46182065-46181677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               319, 37
               

               Conread position:
               29-448
               

               Cow position:
               chr13:2414316-2413902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 75
               

               Conread position:
               30-434
               

               Cow position:
               chr13:18989994-18989609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               278
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               79, 176
               

               Conread position:
               31-395
               

               Cow position:
               chr13:61976677-61977034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               156, 190
               

               Conread position:
               32-473
               

               Cow position:
               chr13:6759503-6759943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 96
               

               Conread position:
               34-449
               

               Cow position:
               chr13:41807060-41806643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 129
               

               Conread position:
               35-447
               

               Cow position:
               chr13:37521451-37521870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               289
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               70, 14
               

               Conread position:
               36-504
               

               Cow position:
               chr13:23266012-23265548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 135
               

               Conread position:
               39-447
               

               Cow position:
               chr13:13766046-13765663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               277
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               360, 145
               

               Conread position:
               40-397
               

               Cow position:
               chr13:61047485-61047138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               69, 90
               

               Conread position:
               44-423
               

               Cow position:
               chr13:27314409-27314032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               60, 35
               

               Conread position:
               46-290
               

               Cow position:
               chr13:24539765-24539519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               46-429
               

               Cow position:
               chr13:45726152-45725783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 105
               

               Conread position:
               46-508
               

               Cow position:
               chr13:6079146-6079608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 176
               

               Conread position:
               46-508
               

               Cow position:
               chr13:60967037-60966574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 124
               

               Conread position:
               49-421
               

               Cow position:
               chr13:18244125-18243761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 16
               

               Conread position:
               54-409
               

               Cow position:
               chr13:54702455-54702097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 65
               

               Conread position:
               54-432
               

               Cow position:
               chr13:15041207-15041584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 248
               

               Conread position:
               54-481
               

               Cow position:
               chr13:46311769-46312172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 137
               

               Conread position:
               56-447
               

               Cow position:
               chr13:18166993-18166605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 132
               

               Conread position:
               57-449
               

               Cow position:
               chr13:19393547-19393163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 23
               

               Conread position:
               57-449
               

               Cow position:
               chr13:60508854-60509249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               270
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               52, 229
               

               Conread position:
               60-426
               

               Cow position:
               chr13:23166839-23167207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 7
               

               Conread position:
               60-499
               

               Cow position:
               chr13:54969565-54969984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               298
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               118, 6
               

               Conread position:
               65-449
               

               Cow position:
               chr13:17970781-17971158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 100
               

               Conread position:
               65-450
               

               Cow position:
               chr13:15622061-15621681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               263
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               44, 69
               

               Conread position:
               65-508
               

               Cow position:
               chr13:6621344-6621778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 166
               

               Conread position:
               65-508
               

               Cow position:
               chr13:20784842-20784389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 156
               

               Conread position:
               66-372
               

               Cow position:
               chr13:1780088-1779778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 239
               

               Conread position:
               66-404
               

               Cow position:
               chr13:61166204-61166534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               38, 93
               

               Conread position:
               66-427
               

               Cow position:
               chr13:20649734-20650094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 42
               

               Conread position:
               66-449
               

               Cow position:
               chr13:26261541-26261917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               43, 247
               

               Conread position:
               66-449
               

               Cow position:
               chr13:48037873-48037494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 97
               

               Conread position:
               66-508
               

               Cow position:
               chr13:54095057-54094622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 120
               

               Conread position:
               67-332
               

               Cow position:
               chr13:14227179-14226917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               48, 130
               

               Conread position:
               67-369
               

               Cow position:
               chr13:19364496-19364197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               49, 173
               

               Conread position:
               67-425
               

               Cow position:
               chr13:52879662-52879297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               259
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               108, 159
               

               Conread position:
               67-449
               

               Cow position:
               chr13:37985499-37985873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 142
               

               Conread position:
               68-427
               

               Cow position:
               chr13:8201234-8201590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 154
               

               Conread position:
               69-508
               

               Cow position:
               chr13:24715487-24715044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 41
               

               Conread position:
               70-300
               

               Cow position:
               chr13:5713543-5713318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 101
               

               Conread position:
               70-449
               

               Cow position:
               chr13:9265569-9265955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 217
               

               Conread position:
               70-449
               

               Cow position:
               chr13:11061233-11060858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               70-508
               

               Cow position:
               chr13:25927041-25926583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 208
               

               Conread position:
               70-508
               

               Cow position:
               chr13:42200867-42200415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 123
               

               Conread position:
               71-307
               

               Cow position:
               chr13:43629532-43629766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 15
               

               Conread position:
               71-333
               

               Cow position:
               chr13:7262641-7262377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 135
               

               Conread position:
               71-372
               

               Cow position:
               chr13:48251744-48252023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               38, 117
               

               Conread position:
               71-422
               

               Cow position:
               chr13:29631100-29630755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 38
               

               Conread position:
               71-434
               

               Cow position:
               chr13:9246962-9246618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               258
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               40, 103
               

               Conread position:
               71-446
               

               Cow position:
               chr13:52285063-52284690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 188
               

               Conread position:
               71-449
               

               Cow position:
               chr13:23856463-23856082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               71-449
               

               Cow position:
               chr13:43594868-43595232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               264
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               40, 116
               

               Conread position:
               71-505
               

               Cow position:
               chr13:33282261-33281821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 157
               

               Conread position:
               71-507
               

               Cow position:
               chr13:16343934-16343506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 59
               

               Conread position:
               71-508
               

               Cow position:
               chr13:4664613-4665055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 156
               

               Conread position:
               71-508
               

               Cow position:
               chr13:9665323-9664877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 246
               

               Conread position:
               71-508
               

               Cow position:
               chr13:14063280-14063726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               308
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               66, 39
               

               Conread position:
               71-508
               

               Cow position:
               chr13:15945748-15945288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 248
               

               Conread position:
               71-508
               

               Cow position:
               chr13:34995078-34995517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 126
               

               Conread position:
               72-316
               

               Cow position:
               chr13:54418479-54418230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               37, 173
               

               Conread position:
               72-442
               

               Cow position:
               chr13:13176896-13176527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 91
               

               Conread position:
               74-364
               

               Cow position:
               chr13:22115948-22115650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               37, 113
               

               Conread position:
               74-434
               

               Cow position:
               chr13:15974855-15974503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               75-404
               

               Cow position:
               chr13:46636887-46637206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               75-469
               

               Cow position:
               chr13:7076500-7076107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 119
               

               Conread position:
               76-434
               

               Cow position:
               chr13:46736446-46736102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               9, 79
               

               Conread position:
               77-388
               

               Cow position:
               chr13:60487214-60487527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               32, 156
               

               Conread position:
               77-393
               

               Cow position:
               chr13:24376732-24376421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               32, 145
               

               Conread position:
               77-403
               

               Cow position:
               chr13:60329987-60329676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               77-410
               

               Cow position:
               chr13:33631362-33631039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 145
               

               Conread position:
               77-426
               

               Cow position:
               chr13:5278946-5279308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               24, 98
               

               Conread position:
               77-508
               

               Cow position:
               chr13:1959251-1958820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 147
               

               Conread position:
               77-508
               

               Cow position:
               chr13:10932794-10932368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 148
               

               Conread position:
               77-508
               

               Cow position:
               chr13:12926032-12925591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 237
               

               Conread position:
               77-508
               

               Cow position:
               chr13:22886750-22887177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 147
               

               Conread position:
               78-387
               

               Cow position:
               chr13:2462991-2463301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               145, 6
               

               Conread position:
               78-449
               

               Cow position:
               chr13:10924665-10925048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               78-507
               

               Cow position:
               chr13:30510302-30509879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 150
               

               Conread position:
               79-308
               

               Cow position:
               chr13:2339669-2339443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               30, 141
               

               Conread position:
               79-378
               

               Cow position:
               chr13:16024828-16024532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               32, 69
               

               Conread position:
               79-448
               

               Cow position:
               chr13:3315433-3315803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 132
               

               Conread position:
               79-449
               

               Cow position:
               chr13:55673965-55674337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 146
               

               Conread position:
               79-504
               

               Cow position:
               chr13:49848157-49847743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 70
               

               Conread position:
               79-508
               

               Cow position:
               chr13:20466055-20466473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 33
               

               Conread position:
               79-508
               

               Cow position:
               chr13:46284377-46284795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               20, 101
               

               Conread position:
               80-439
               

               Cow position:
               chr13:8524382-8524737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 84
               

               Conread position:
               81-368
               

               Cow position:
               chr13:41154808-41155080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               28, 68
               

               Conread position:
               82-343
               

               Cow position:
               chr13:6975553-6975816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               27, 112
               

               Conread position:
               82-433
               

               Cow position:
               chr13:43184635-43184994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 124
               

               Conread position:
               82-508
               

               Cow position:
               chr13:12283072-12282632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               296
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               92, 28
               

               Conread position:
               82-508
               

               Cow position:
               chr13:37818522-37818950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               86-505
               

               Cow position:
               chr13:12207276-12206859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 136
               

               Conread position:
               87-505
               

               Cow position:
               chr13:29814773-29814368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               88-474
               

               Cow position:
               chr13:54864806-54865160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 65
               

               Conread position:
               89-350
               

               Cow position:
               chr13:54093970-54093716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               20, 82
               

               Conread position:
               89-364
               

               Cow position:
               chr13:30026343-30026066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               16, 98
               

               Conread position:
               89-434
               

               Cow position:
               chr13:24369815-24369468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 137
               

               Conread position:
               89-434
               

               Cow position:
               chr13:47963971-47964295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 67
               

               Conread position:
               89-508
               

               Cow position:
               chr13:21241862-21242281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 133
               

               Conread position:
               90-451
               

               Cow position:
               chr13:11096401-11096051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               91-315
               

               Cow position:
               chr13:11947500-11947736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               23, 224
               

               Conread position:
               91-447
               

               Cow position:
               chr13:19033775-19033431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               11, 59
               

               Conread position:
               91-448
               

               Cow position:
               chr13:54345005-54344653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               14, 224
               

               Conread position:
               91-508
               

               Cow position:
               chr13:11767817-11768232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 22
               

               Conread position:
               95-426
               

               Cow position:
               chr13:9643661-9643993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 14
               

               Conread position:
               95-447
               

               Cow position:
               chr13:15281716-15282062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               96-448
               

               Cow position:
               chr13:35653870-35654218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               15, 108
               

               Conread position:
               96-451
               

               Cow position:
               chr13:15192671-15193017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 78
               

               Conread position:
               96-472
               

               Cow position:
               chr13:55315966-55316345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               264
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               13, 125
               

               Conread position:
               96-473
               

               Cow position:
               chr13:35718911-35719290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               268
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               19, 133
               

               Conread position:
               96-506
               

               Cow position:
               chr13:1558309-1558699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 78
               

               Conread position:
               96-508
               

               Cow position:
               chr13:34261455-34261030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 97
               

               Conread position:
               97-508
               

               Cow position:
               chr13:10845815-10845413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 124
               

               Conread position:
               98-432
               

               Cow position:
               chr13:40491453-40491104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               9, 202
               

               Conread position:
               98-434
               

               Cow position:
               chr13:13465569-13465880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               98-499
               

               Cow position:
               chr13:60650700-60651085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               98-505
               

               Cow position:
               chr13:5263065-5263481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 61
               

               Conread position:
               98-508
               

               Cow position:
               chr13:20839784-20839375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 10
               

               Conread position:
               99-508
               

               Cow position:
               chr13:2192924-2192532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               285
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               126, 10
               

               Conread position:
               99-508
               

               Cow position:
               chr13:18491814-18491402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               100-446
               

               Cow position:
               chr13:43919036-43919387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               9, 100
               

               Conread position:
               105-452
               

               Cow position:
               chr13:19022489-19022139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               59, 8
               

               Conread position:
               110-395
               

               Cow position:
               chr13:51014973-51015252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               64, 184
               

               Conread position:
               110-425
               

               Cow position:
               chr13:52227893-52228205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               64, 86
               

               Conread position:
               110-434
               

               Cow position:
               chr13:48598111-48597795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               287, 54
               

               Conread position:
               112-432
               

               Cow position:
               chr13:59170862-59170542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               112, 52
               

               Conread position:
               113-351
               

               Cow position:
               chr13:51108695-51108462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               103, 71
               

               Conread position:
               113-449
               

               Cow position:
               chr13:37592734-37593076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 191
               

               Conread position:
               113-451
               

               Cow position:
               chr13:46112171-46111838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               115, 73
               

               Conread position:
               113-505
               

               Cow position:
               chr13:8245128-8245516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 123
               

               Conread position:
               116-397
               

               Cow position:
               chr13:61188736-61188457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               58, 38
               

               Conread position:
               116-433
               

               Cow position:
               chr13:61990133-61990437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               58, 74
               

               Conread position:
               116-449
               

               Cow position:
               chr13:547689-547366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 43
               

               Conread position:
               116-507
               

               Cow position:
               chr13:21627683-21628067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               153, 56
               

               Conread position:
               117-298
               

               Cow position:
               chr13:2302638-2302821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               117-449
               

               Cow position:
               chr13:24230413-24230085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 179
               

               Conread position:
               117-507
               

               Cow position:
               chr13:52749288-52749667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               231, 15
               

               Conread position:
               118-449
               

               Cow position:
               chr13:9900349-9900030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               118-449
               

               Cow position:
               chr13:26369725-26369395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               198, 180
               

               Conread position:
               120-502
               

               Cow position:
               chr13:8652240-8652614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 80
               

               Conread position:
               125-368
               

               Cow position:
               chr13:22276974-22277225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 152
               

               Conread position:
               126-449
               

               Cow position:
               chr13:15991031-15991360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 184
               

               Conread position:
               126-449
               

               Cow position:
               chr13:21283515-21283833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               50, 97
               

               Conread position:
               129-284
               

               Cow position:
               chr13:22025521-22025675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               130-370
               

               Cow position:
               chr13:62474612-62474848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               44, 94
               

               Conread position:
               132-455
               

               Cow position:
               chr13:14771646-14771317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               44, 180
               

               Conread position:
               133-434
               

               Cow position:
               chr13:55583383-55583084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               134-449
               

               Cow position:
               chr13:11644116-11643810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               214, 20
               

               Conread position:
               135-469
               

               Cow position:
               chr13:52055414-52055741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               37, 101
               

               Conread position:
               135-507
               

               Cow position:
               chr13:19188486-19188110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 174
               

               Conread position:
               136-434
               

               Cow position:
               chr13:5758164-5758456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 52
               

               Conread position:
               145-372
               

               Cow position:
               chr13:4420519-4420291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               70, 153
               

               Conread position:
               145-448
               

               Cow position:
               chr13:44003893-44003573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 43
               

               Conread position:
               146-449
               

               Cow position:
               chr13:20231034-20231319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               182, 15
               

               Conread position:
               147-440
               

               Cow position:
               chr13:15110489-15110194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 14
               

               Conread position:
               148-469
               

               Cow position:
               chr13:46430132-46430452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               103, 219
               

               Conread position:
               154-305
               

               Cow position:
               chr13:22030251-22030102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               68, 34
               

               Conread position:
               154-342
               

               Cow position:
               chr13:39699971-39699786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 70
               

               Conread position:
               157-364
               

               Cow position:
               chr13:7790174-7789964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               135, 62
               

               Conread position:
               157-397
               

               Cow position:
               chr13:13954228-13954469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 142
               

               Conread position:
               157-508
               

               Cow position:
               chr13:47188602-47188256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 10
               

               Conread position:
               157-508
               

               Cow position:
               chr13:49022710-49023071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               17, 66
               

               Conread position:
               159-439
               

               Cow position:
               chr13:32657636-32657919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               162-508
               

               Cow position:
               chr13:29831278-29831632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               255
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               164-434
               

               Cow position:
               chr13:18999695-18999422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               57, 96
               

               Conread position:
               164-446
               

               Cow position:
               chr13:43829406-43829118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               7, 30
               

               Conread position:
               167-369
               

               Cow position:
               chr13:20128815-20128618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               68, 53
               

               Conread position:
               168-448
               

               Cow position:
               chr13:49520673-49520950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               177, 52
               

               Conread position:
               169-507
               

               Cow position:
               chr13:20180565-20180229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 134
               

               Conread position:
               172-360
               

               Cow position:
               chr13:16711775-16711588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 133
               

               Conread position:
               172-400
               

               Cow position:
               chr13:6931060-6930836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               57, 83
               

               Conread position:
               172-434
               

               Cow position:
               chr13:26698352-26698612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               66, 47
               

               Conread position:
               172-448
               

               Cow position:
               chr13:20580050-20579784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               183, 32
               

               Conread position:
               172-450
               

               Cow position:
               chr13:6441955-6442235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               31, 130
               

               Conread position:
               172-469
               

               Cow position:
               chr13:54388876-54389168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               173, 27
               

               Conread position:
               172-507
               

               Cow position:
               chr13:9800654-9800317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               172-508
               

               Cow position:
               chr13:8374627-8374966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               173, 47
               

               Conread position:
               172-508
               

               Cow position:
               chr13:18058104-18058452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               136, 21
               

               Conread position:
               172-508
               

               Cow position:
               chr13:20473546-20473880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               177, 47
               

               Conread position:
               172-508
               

               Cow position:
               chr13:33975562-33975245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               177, 124
               

               Conread position:
               172-508
               

               Cow position:
               chr13:50739311-50738983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               79, 49
               

               Conread position:
               173-434
               

               Cow position:
               chr13:37640730-37640475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               42, 69
               

               Conread position:
               174-449
               

               Cow position:
               chr13:20360413-20360150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               174, 46
               

               Conread position:
               174-449
               

               Cow position:
               chr13:28552739-28552461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               55, 255
               

               Conread position:
               174-507
               

               Cow position:
               chr13:23512510-23512176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               174, 117
               

               Conread position:
               174-507
               

               Cow position:
               chr13:46044295-46043970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               174, 27
               

               Conread position:
               178-451
               

               Cow position:
               chr13:11321477-11321748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               140, 42
               

               Conread position:
               178-452
               

               Cow position:
               chr13:51115889-51116157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               171, 42
               

               Conread position:
               183-506
               

               Cow position:
               chr13:12745805-12745487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 37
               

               Conread position:
               187-471
               

               Cow position:
               chr13:25579057-25579341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 67
               

               Conread position:
               188-411
               

               Cow position:
               chr13:25381091-25380872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               34, 104
               

               Conread position:
               188-508
               

               Cow position:
               chr13:33160863-33161181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               190-405
               

               Cow position:
               chr13:5060872-5060662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               158, 101
               

               Conread position:
               192-419
               

               Cow position:
               chr13:57325976-57326199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 27
               

               Conread position:
               192-450
               

               Cow position:
               chr13:11202157-11201911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               192-508
               

               Cow position:
               chr13:21563867-21563540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               50, 28
               

               Conread position:
               197-508
               

               Cow position:
               chr13:1569043-1568729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               180, 22
               

               Conread position:
               198-420
               

               Cow position:
               chr13:50713321-50713110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 60
               

               Conread position:
               198-449
               

               Cow position:
               chr13:14576325-14576084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               150, 22
               

               Conread position:
               198-471
               

               Cow position:
               chr13:18995247-18994977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               52, 102
               

               Conread position:
               198-508
               

               Cow position:
               chr13:40464336-40464042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               151, 22
               

               Conread position:
               199-397
               

               Cow position:
               chr13:27550857-27550663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               149, 32
               

               Conread position:
               200-473
               

               Cow position:
               chr13:19240553-19240279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               140, 94
               

               Conread position:
               203-506
               

               Cow position:
               chr13:22075787-22075485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 17
               

               Conread position:
               203-506
               

               Cow position:
               chr13:56678129-56677837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               145, 44
               

               Conread position:
               204-508
               

               Cow position:
               chr13:47322291-47322597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 104
               

               Conread position:
               207-427
               

               Cow position:
               chr13:11079612-11079402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 7
               

               Conread position:
               209-393
               

               Cow position:
               chr13:15964429-15964244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               21, 166
               

               Conread position:
               209-425
               

               Cow position:
               chr13:60389379-60389593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 92
               

               Conread position:
               209-508
               

               Cow position:
               chr13:43166924-43167219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               210-449
               

               Cow position:
               chr13:55728006-55727773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               138, 9
               

               Conread position:
               210-506
               

               Cow position:
               chr13:49457781-49457499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               187, 70
               

               Conread position:
               210-507
               

               Cow position:
               chr13:49200743-49200454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               9, 13
               

               Conread position:
               216-508
               

               Cow position:
               chr13:49796118-49795833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               5, 14
               

               Conread position:
               217-449
               

               Cow position:
               chr13:24110586-24110351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               85, 39
               

               Conread position:
               220-448
               

               Cow position:
               chr13:9082907-9083137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               220-449
               

               Cow position:
               chr13:3989301-3989075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               88, 196
               

               Conread position:
               224-393
               

               Cow position:
               chr13:22227627-22227793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               119, 70
               

               Conread position:
               224-449
               

               Cow position:
               chr13:54128499-54128724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 73
               

               Conread position:
               224-449
               

               Cow position:
               chr13:56034765-56034988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               124, 66
               

               Conread position:
               225-464
               

               Cow position:
               chr13:185625-185385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 56
               

               Conread position:
               226-426
               

               Cow position:
               chr13:20137916-20137715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               122, 85
               

               Conread position:
               227-421
               

               Cow position:
               chr13:16187807-16187997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               121, 11
               

               Conread position:
               227-448
               

               Cow position:
               chr13:46329513-46329734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               122, 79
               

               Conread position:
               227-449
               

               Cow position:
               chr13:3211642-3211420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               123, 66
               

               Conread position:
               227-449
               

               Cow position:
               chr13:51901683-51901455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               227-505
               

               Cow position:
               chr13:12324273-12324000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               65, 5
               

               Conread position:
               227-508
               

               Cow position:
               chr13:13446068-13446342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               16, 65
               

               Conread position:
               230-390
               

               Cow position:
               chr13:10040447-10040608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               85, 159
               

               Conread position:
               236-447
               

               Cow position:
               chr13:827324-827118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               112, 63
               

               Conread position:
               240-449
               

               Cow position:
               chr13:17822873-17823079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               242-418
               

               Cow position:
               chr13:54695840-54696011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               103, 60
               

               Conread position:
               242-466
               

               Cow position:
               chr13:54471087-54470871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               103, 60
               

               Conread position:
               242-508
               

               Cow position:
               chr13:7149304-7149032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               106, 36
               

               Conread position:
               243-508
               

               Cow position:
               chr13:7149438-7149704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               152, 56
               

               Conread position:
               243-508
               

               Cow position:
               chr13:26522873-26523124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               159, 63
               

               Conread position:
               245-449
               

               Cow position:
               chr13:62008185-62007978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               245-456
               

               Cow position:
               chr13:17563809-17563604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               103, 49
               

               Conread position:
               249-483
               

               Cow position:
               chr13:53788035-53788271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               33, 54
               

               Conread position:
               250-434
               

               Cow position:
               chr13:29123373-29123190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 57
               

               Conread position:
               250-462
               

               Cow position:
               chr13:55162279-55162069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               98, 49
               

               Conread position:
               250-469
               

               Cow position:
               chr13:42672354-42672571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 41
               

               Conread position:
               251-508
               

               Cow position:
               chr13:56763939-56764182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               252-508
               

               Cow position:
               chr13:84648-84386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               95, 233
               

               Conread position:
               253-449
               

               Cow position:
               chr13:48554438-48554237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               255-421
               

               Cow position:
               chr13:29773496-29773662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               94, 51
               

               Conread position:
               255-507
               

               Cow position:
               chr13:7356673-7356445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               92, 46
               

               Conread position:
               257-506
               

               Cow position:
               chr13:15090847-15091093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               258-448
               

               Cow position:
               chr13:25428168-25428351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               138, 38
               

               Conread position:
               258-508
               

               Cow position:
               chr13:6887936-6887694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 49
               

               Conread position:
               259-447
               

               Cow position:
               chr13:17838008-17837823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               89, 43
               

               Conread position:
               259-507
               

               Cow position:
               chr13:34665188-34664944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               132, 44
               

               Conread position:
               260-426
               

               Cow position:
               chr13:19183924-19183762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               88, 32
               

               Conread position:
               263-449
               

               Cow position:
               chr13:17350408-17350226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               85, 39
               

               Conread position:
               264-452
               

               Cow position:
               chr13:7191033-7190833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 159
               

               Conread position:
               265-508
               

               Cow position:
               chr13:30271377-30271136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 104
               

               Conread position:
               266-450
               

               Cow position:
               chr13:37946898-37947080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 96
               

               Conread position:
               266-508
               

               Cow position:
               chr13:16020904-16020654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               79, 33
               

               Conread position:
               271-448
               

               Cow position:
               chr13:9117524-9117693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               77, 9
               

               Conread position:
               271-449
               

               Cow position:
               chr13:18340583-18340404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 41
               

               Conread position:
               274-443
               

               Cow position:
               chr13:51856842-51857008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               74, 28
               

               Conread position:
               279-508
               

               Cow position:
               chr13:38631536-38631768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               70, 46
               

               Conread position:
               287-482
               

               Cow position:
               chr13:32657411-32657215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               61, 19
               

               Conread position:
               289-508
               

               Cow position:
               chr13:9161955-9161729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               16, 12
               

               Conread position:
               290-506
               

               Cow position:
               chr13:17796398-17796182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               59, 35
               

               Conread position:
               296-448
               

               Cow position:
               chr13:17813496-17813343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               301-502
               

               Cow position:
               chr13:52568982-52569185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               306-449
               

               Cow position:
               chr13:6183404-6183549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               307-449
               

               Cow position:
               chr13:42640397-42640257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               90, 37
               

               Conread position:
               307-508
               

               Cow position:
               chr13:7046885-7046675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               308-448
               

               Cow position:
               chr13:13775230-13775371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               308-508
               

               Cow position:
               chr13:43155843-43156043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               310-508
               

               Cow position:
               chr13:20520073-20519866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               310-508
               

               Cow position:
               chr13:33974745-33974541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 103
               

               Conread position:
               323-508
               

               Cow position:
               chr13:8822861-8822682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               27, 91
               

               Conread position:
               327-449
               

               Cow position:
               chr13:21295070-21294946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               330-502
               

               Cow position:
               chr13:38012324-38012140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               346-499
               

               Cow position:
               chr13:18280811-18280965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 126
               

               Conread position:
               347-507
               

               Cow position:
               chr13:28520453-28520612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               49, 104
               

               Conread position:
               353-506
               

               Cow position:
               chr13:40885469-40885315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               355-508
               

               Cow position:
               chr13:22227794-22227938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               355-508
               

               Cow position:
               chr13:58762635-58762788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               369-505
               

               Cow position:
               chr13:56270285-56270422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               369-505
               

               Cow position:
               chr13:56281187-56281050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               379-508
               

               Cow position:
               chr13:23047867-23047997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 0
               
Show alignments to all cow chromosomes.
Conread position:	6-508
Cow position:	chr13:43194485-43193984 (view UCSC Genome Browser custom track)
Alignm length:	513
Alignm identity:	372
Alignm E-value:	0
Alignm gaps (pig, cow):	105, 60
Conread position:	11-486
Cow position:	chr13:32535959-32535490 (view UCSC Genome Browser custom track)
Alignm length:	481
Alignm identity:	331
Alignm E-value:	0
Alignm gaps (pig, cow):	232, 17
Conread position:	12-506
Cow position:	chr13:9125980-9125486 (view UCSC Genome Browser custom track)
Alignm length:	504
Alignm identity:	349
Alignm E-value:	0
Alignm gaps (pig, cow):	97, 127
Conread position:	12-508
Cow position:	chr13:9803364-9802881 (view UCSC Genome Browser custom track)
Alignm length:	502
Alignm identity:	344
Alignm E-value:	0
Alignm gaps (pig, cow):	231, 100
Conread position:	13-449
Cow position:	chr13:32283425-32282999 (view UCSC Genome Browser custom track)
Alignm length:	444
Alignm identity:	298
Alignm E-value:	9.94922e-44
Alignm gaps (pig, cow):	90, 24
Conread position:	15-408
Cow position:	chr13:30651479-30651100 (view UCSC Genome Browser custom track)
Alignm length:	398
Alignm identity:	275
Alignm E-value:	0
Alignm gaps (pig, cow):	94, 138
Conread position:	15-434
Cow position:	chr13:6153475-6153898 (view UCSC Genome Browser custom track)
Alignm length:	428
Alignm identity:	310
Alignm E-value:	0
Alignm gaps (pig, cow):	93, 171
Conread position:	15-449
Cow position:	chr13:38329936-38329487 (view UCSC Genome Browser custom track)
Alignm length:	452
Alignm identity:	308
Alignm E-value:	0
Alignm gaps (pig, cow):	49, 15
Conread position:	16-290
Cow position:	chr13:16270239-16269951 (view UCSC Genome Browser custom track)
Alignm length:	290
Alignm identity:	197
Alignm E-value:	6e-28
Alignm gaps (pig, cow):	16, 127
Conread position:	16-294
Cow position:	chr13:60690416-60690703 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	203
Alignm E-value:	8.00001e-41
Alignm gaps (pig, cow):	76, 0
Conread position:	16-295
Cow position:	chr13:6606717-6607000 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	198
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	88, 210
Conread position:	16-309
Cow position:	chr13:6945676-6945377 (view UCSC Genome Browser custom track)
Alignm length:	302
Alignm identity:	216
Alignm E-value:	4.2039e-45
Alignm gaps (pig, cow):	93, 211
Conread position:	16-312
Cow position:	chr13:6664440-6664143 (view UCSC Genome Browser custom track)
Alignm length:	303
Alignm identity:	196
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	101, 276
Conread position:	16-337
Cow position:	chr13:37980348-37980660 (view UCSC Genome Browser custom track)
Alignm length:	329
Alignm identity:	219
Alignm E-value:	6e-28
Alignm gaps (pig, cow):	93, 73
Conread position:	16-338
Cow position:	chr13:20378039-20378354 (view UCSC Genome Browser custom track)
Alignm length:	324
Alignm identity:	221
Alignm E-value:	2e-39
Alignm gaps (pig, cow):	152, 14
Conread position:	16-343
Cow position:	chr13:562834-563164 (view UCSC Genome Browser custom track)
Alignm length:	336
Alignm identity:	229
Alignm E-value:	2e-39
Alignm gaps (pig, cow):	80, 212
Conread position:	16-346
Cow position:	chr13:37945917-37946230 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	228
Alignm E-value:	9e-32
Alignm gaps (pig, cow):	131, 92
Conread position:	16-354
Cow position:	chr13:5091359-5091702 (view UCSC Genome Browser custom track)
Alignm length:	346
Alignm identity:	246
Alignm E-value:	0
Alignm gaps (pig, cow):	93, 24
Conread position:	16-363
Cow position:	chr13:47313206-47312875 (view UCSC Genome Browser custom track)
Alignm length:	349
Alignm identity:	235
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	329, 92
Conread position:	16-367
Cow position:	chr13:40813432-40813079 (view UCSC Genome Browser custom track)
Alignm length:	361
Alignm identity:	226
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	101, 250