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Cow genome map

           
Conread name:
           
rpigcf0_008845.y1
        

               
Conread position:
               
10-269
               

               
Cow position:
               
chr15:6385772-6385511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
107, 79
               

               
Conread position:
               
11-452
               

               
Cow position:
               
chr15:41418399-41418857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
63, 192
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr15:24968199-24967701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 98
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr15:27247920-27247424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
12-294
               

               
Cow position:
               
chr15:9267652-9267929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 178
               

               
Conread position:
               
12-320
               

               
Cow position:
               
chr15:33681068-33680754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
65, 219
               

               
Conread position:
               
12-347
               

               
Cow position:
               
chr15:23775550-23775860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 127
               

               
Conread position:
               
15-309
               

               
Cow position:
               
chr15:53118742-53118434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
50, 221
               

               
Conread position:
               
15-405
               

               
Cow position:
               
chr15:35838678-35839076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 147
               

               
Conread position:
               
16-284
               

               
Cow position:
               
chr15:34064506-34064780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
16-294
               

               
Cow position:
               
chr15:22168470-22168185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
16-300
               

               
Cow position:
               
chr15:53680364-53680642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
16-309
               

               
Cow position:
               
chr15:47990355-47990653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
101, 189
               

               
Conread position:
               
16-311
               

               
Cow position:
               
chr15:29272602-29272301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
20, 212
               

               
Conread position:
               
16-319
               

               
Cow position:
               
chr15:13545503-13545210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
86, 66
               

               
Conread position:
               
16-342
               

               
Cow position:
               
chr15:14322640-14322975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 224
               

               
Conread position:
               
16-343
               

               
Cow position:
               
chr15:7749739-7750054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
222, 94
               

               
Conread position:
               
16-365
               

               
Cow position:
               
chr15:33376401-33376752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
101, 276
               

               
Conread position:
               
16-372
               

               
Cow position:
               
chr15:9871008-9871364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
16-372
               

               
Cow position:
               
chr15:34104673-34104310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 158
               

               
Conread position:
               
16-373
               

               
Cow position:
               
chr15:31767684-31767325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
101, 275
               

               
Conread position:
               
16-377
               

               
Cow position:
               
chr15:19119210-19119563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
89, 94
               

               
Conread position:
               
16-390
               

               
Cow position:
               
chr15:43030615-43030993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
95, 117
               

               
Conread position:
               
16-395
               

               
Cow position:
               
chr15:24044685-24045070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 212
               

               
Conread position:
               
16-397
               

               
Cow position:
               
chr15:20472139-20472520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 119
               

               
Conread position:
               
16-397
               

               
Cow position:
               
chr15:27281269-27280899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 75
               

               
Conread position:
               
16-399
               

               
Cow position:
               
chr15:24616970-24616597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
100, 71
               

               
Conread position:
               
16-399
               

               
Cow position:
               
chr15:47279751-47280113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
332, 70
               

               
Conread position:
               
16-408
               

               
Cow position:
               
chr15:21832017-21832420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
16-411
               

               
Cow position:
               
chr15:24797394-24797797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
53, 145
               

               
Conread position:
               
16-411
               

               
Cow position:
               
chr15:27892390-27892020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
357, 71
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr15:16640190-16639779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 209
               

               
Conread position:
               
16-423
               

               
Cow position:
               
chr15:16585926-16585513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
16-425
               

               
Cow position:
               
chr15:32979627-32980034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 281
               

               
Conread position:
               
16-427
               

               
Cow position:
               
chr15:13387488-13387074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 69
               

               
Conread position:
               
16-429
               

               
Cow position:
               
chr15:6970385-6969982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
16-434
               

               
Cow position:
               
chr15:608563-608137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
16-434
               

               
Cow position:
               
chr15:20352246-20351822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 216
               

               
Conread position:
               
16-434
               

               
Cow position:
               
chr15:44641304-44640886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 141
               

               
Conread position:
               
16-439
               

               
Cow position:
               
chr15:1082980-1083391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
154, 38
               

               
Conread position:
               
16-443
               

               
Cow position:
               
chr15:52482422-52482846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
16-443
               

               
Cow position:
               
chr15:53164426-53164003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 94
               

               
Conread position:
               
16-448
               

               
Cow position:
               
chr15:1329699-1330127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
16-448
               

               
Cow position:
               
chr15:4373882-4373464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 210
               

               
Conread position:
               
16-448
               

               
Cow position:
               
chr15:16604226-16603801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
16-448
               

               
Cow position:
               
chr15:17233591-17233169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
16-448
               

               
Cow position:
               
chr15:33976286-33976719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 158
               

               
Conread position:
               
16-448
               

               
Cow position:
               
chr15:43626865-43626445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr15:143827-144273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr15:16583305-16583715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 172
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr15:17084616-17084184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr15:20458893-20459333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 289
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr15:20486806-20487228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 162
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr15:20534043-20534475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 64
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr15:26896314-26896719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr15:28924362-28924780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 93
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr15:36435612-36435180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
16-450
               

               
Cow position:
               
chr15:33306513-33306084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 51
               

               
Conread position:
               
16-450
               

               
Cow position:
               
chr15:51632638-51633084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
85, 152
               

               
Conread position:
               
16-451
               

               
Cow position:
               
chr15:17196552-17196122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
93, 268
               

               
Conread position:
               
16-464
               

               
Cow position:
               
chr15:46868302-46868754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
16-473
               

               
Cow position:
               
chr15:26421195-26421647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
16-487
               

               
Cow position:
               
chr15:7962495-7962019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 211
               

               
Conread position:
               
16-487
               

               
Cow position:
               
chr15:9493891-9494354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 59
               

               
Conread position:
               
16-505
               

               
Cow position:
               
chr15:23798115-23798621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
16-505
               

               
Cow position:
               
chr15:27862923-27863407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 27
               

               
Conread position:
               
16-506
               

               
Cow position:
               
chr15:15881328-15880847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 11
               

               
Conread position:
               
16-506
               

               
Cow position:
               
chr15:24976784-24977255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 209
               

               
Conread position:
               
16-507
               

               
Cow position:
               
chr15:20422357-20422866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 95
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr15:794611-795119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr15:9648328-9648791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
95, 38
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr15:13285450-13284933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 164
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr15:33625371-33624869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 159
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr15:35041470-35041958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr15:46563070-46563579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 214
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr15:50177503-50177025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 67
               

               
Conread position:
               
17-275
               

               
Cow position:
               
chr15:37470596-37470352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
17-354
               

               
Cow position:
               
chr15:13683882-13684197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
17-361
               

               
Cow position:
               
chr15:25110761-25111108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 56
               

               
Conread position:
               
17-382
               

               
Cow position:
               
chr15:6331655-6331994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
17-387
               

               
Cow position:
               
chr15:30820417-30820799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
44, 148
               

               
Conread position:
               
17-399
               

               
Cow position:
               
chr15:6152071-6151687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
98, 275
               

               
Conread position:
               
17-413
               

               
Cow position:
               
chr15:13515775-13515377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 92
               

               
Conread position:
               
17-433
               

               
Cow position:
               
chr15:5728044-5727646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 188
               

               
Conread position:
               
17-447
               

               
Cow position:
               
chr15:13554745-13554330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
17-447
               

               
Cow position:
               
chr15:40999646-41000093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 222
               

               
Conread position:
               
17-449
               

               
Cow position:
               
chr15:26911675-26912097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 88
               

               
Conread position:
               
17-449
               

               
Cow position:
               
chr15:30047130-30047570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 211
               

               
Conread position:
               
17-505
               

               
Cow position:
               
chr15:7191856-7192344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 205
               

               
Conread position:
               
17-507
               

               
Cow position:
               
chr15:6905958-6905438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
46, 303
               

               
Conread position:
               
18-313
               

               
Cow position:
               
chr15:51460641-51460334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 171
               

               
Conread position:
               
18-419
               

               
Cow position:
               
chr15:27732802-27732417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr15:6530433-6530846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
18-449
               

               
Cow position:
               
chr15:16112807-16112375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 55
               

               
Conread position:
               
18-449
               

               
Cow position:
               
chr15:19186213-19186638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
18-449
               

               
Cow position:
               
chr15:22938931-22939350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
18-505
               

               
Cow position:
               
chr15:5536154-5535678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 87
               

               
Conread position:
               
18-508
               

               
Cow position:
               
chr15:10570222-10570697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
18-508
               

               
Cow position:
               
chr15:22531460-22530979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
18-508
               

               
Cow position:
               
chr15:24285393-24284901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 211
               

               
Conread position:
               
19-334
               

               
Cow position:
               
chr15:27282193-27281892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
19-373
               

               
Cow position:
               
chr15:3893146-3893501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 272
               

               
Conread position:
               
20-449
               

               
Cow position:
               
chr15:21388768-21389188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 34
               

               
Conread position:
               
22-421
               

               
Cow position:
               
chr15:41360567-41360947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 48
               

               
Conread position:
               
22-439
               

               
Cow position:
               
chr15:42415667-42415240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 149
               

               
Conread position:
               
23-306
               

               
Cow position:
               
chr15:5571236-5571522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 280
               

               
Conread position:
               
24-447
               

               
Cow position:
               
chr15:42788764-42789171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 80
               

               
Conread position:
               
25-364
               

               
Cow position:
               
chr15:52739726-52740065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
191, 84
               

               
Conread position:
               
27-448
               

               
Cow position:
               
chr15:4138531-4138112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
28-309
               

               
Cow position:
               
chr15:28126654-28126934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
81, 160
               

               
Conread position:
               
31-359
               

               
Cow position:
               
chr15:16936471-16936782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
32-455
               

               
Cow position:
               
chr15:20370079-20370486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 29
               

               
Conread position:
               
37-299
               

               
Cow position:
               
chr15:44209954-44209689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 40
               

               
Conread position:
               
37-336
               

               
Cow position:
               
chr15:53402616-53402901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
134, 71
               

               
Conread position:
               
37-420
               

               
Cow position:
               
chr15:21421328-21420942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
54, 122
               

               
Conread position:
               
37-434
               

               
Cow position:
               
chr15:16307802-16307412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 188
               

               
Conread position:
               
37-473
               

               
Cow position:
               
chr15:9177825-9178251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 157
               

               
Conread position:
               
39-449
               

               
Cow position:
               
chr15:286864-286453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 50
               

               
Conread position:
               
41-430
               

               
Cow position:
               
chr15:18018294-18017923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
46-366
               

               
Cow position:
               
chr15:36621796-36621469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 149
               

               
Conread position:
               
46-506
               

               
Cow position:
               
chr15:12170619-12170162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 67
               

               
Conread position:
               
47-447
               

               
Cow position:
               
chr15:47042264-47042654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr15:18206135-18206471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
19, 247
               

               
Conread position:
               
49-452
               

               
Cow position:
               
chr15:39599813-39599418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
51-312
               

               
Cow position:
               
chr15:51831220-51831489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
52-343
               

               
Cow position:
               
chr15:11362807-11363093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
53-359
               

               
Cow position:
               
chr15:20725247-20725550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
54-317
               

               
Cow position:
               
chr15:10615372-10615627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 117
               

               
Conread position:
               
57-432
               

               
Cow position:
               
chr15:36259225-36259612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
54, 176
               

               
Conread position:
               
58-369
               

               
Cow position:
               
chr15:37716558-37716877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
58-508
               

               
Cow position:
               
chr15:13846214-13846667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
59-300
               

               
Cow position:
               
chr15:7827674-7827916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
60-427
               

               
Cow position:
               
chr15:6657469-6657096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 63
               

               
Conread position:
               
61-470
               

               
Cow position:
               
chr15:38323190-38322789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
65-238
               

               
Cow position:
               
chr15:36618538-36618358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
65-277
               

               
Cow position:
               
chr15:23139804-23140009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
178, 36
               

               
Conread position:
               
65-319
               

               
Cow position:
               
chr15:38846454-38846204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
65-421
               

               
Cow position:
               
chr15:21365842-21366194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
150, 45
               

               
Conread position:
               
65-430
               

               
Cow position:
               
chr15:35417262-35417631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
65-452
               

               
Cow position:
               
chr15:34140338-34139953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
46, 182
               

               
Conread position:
               
65-473
               

               
Cow position:
               
chr15:3572346-3572748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 109
               

               
Conread position:
               
65-508
               

               
Cow position:
               
chr15:5730295-5729854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 98
               

               
Conread position:
               
66-369
               

               
Cow position:
               
chr15:40009293-40009598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
66-396
               

               
Cow position:
               
chr15:21908291-21907964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
66-403
               

               
Cow position:
               
chr15:16476388-16476718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
66-427
               

               
Cow position:
               
chr15:40343607-40343245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 108
               

               
Conread position:
               
66-449
               

               
Cow position:
               
chr15:16927727-16928119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
81, 96
               

               
Conread position:
               
66-451
               

               
Cow position:
               
chr15:1298093-1297712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 133
               

               
Conread position:
               
66-505
               

               
Cow position:
               
chr15:19279741-19280173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 32
               

               
Conread position:
               
66-505
               

               
Cow position:
               
chr15:20482478-20482928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 162
               

               
Conread position:
               
66-508
               

               
Cow position:
               
chr15:8230223-8230646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 133
               

               
Conread position:
               
66-508
               

               
Cow position:
               
chr15:21894139-21893678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 160
               

               
Conread position:
               
67-434
               

               
Cow position:
               
chr15:36781980-36782339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 41
               

               
Conread position:
               
67-508
               

               
Cow position:
               
chr15:44252718-44252282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 154
               

               
Conread position:
               
69-448
               

               
Cow position:
               
chr15:21941495-21941869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
70-422
               

               
Cow position:
               
chr15:9928709-9928361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
70-449
               

               
Cow position:
               
chr15:2952777-2953159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 180
               

               
Conread position:
               
70-504
               

               
Cow position:
               
chr15:31616651-31617086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 160
               

               
Conread position:
               
71-432
               

               
Cow position:
               
chr15:4535259-4534903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
71-440
               

               
Cow position:
               
chr15:43248419-43248793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 151
               

               
Conread position:
               
71-447
               

               
Cow position:
               
chr15:24994176-24994536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
71-508
               

               
Cow position:
               
chr15:14020823-14020395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
71-508
               

               
Cow position:
               
chr15:17100364-17100806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 97
               

               
Conread position:
               
71-508
               

               
Cow position:
               
chr15:28236549-28236968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
72-439
               

               
Cow position:
               
chr15:2669254-2668891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 147
               

               
Conread position:
               
73-426
               

               
Cow position:
               
chr15:23767915-23768259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
73-508
               

               
Cow position:
               
chr15:22532011-22531571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 159
               

               
Conread position:
               
74-451
               

               
Cow position:
               
chr15:5683483-5683123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
76-448
               

               
Cow position:
               
chr15:22553177-22553565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
33, 164
               

               
Conread position:
               
76-449
               

               
Cow position:
               
chr15:38883503-38883124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 238
               

               
Conread position:
               
77-411
               

               
Cow position:
               
chr15:11658219-11658558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 148
               

               
Conread position:
               
77-432
               

               
Cow position:
               
chr15:35642366-35642008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 221
               

               
Conread position:
               
77-434
               

               
Cow position:
               
chr15:50341454-50341111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
225, 27
               

               
Conread position:
               
77-475
               

               
Cow position:
               
chr15:22137029-22136641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 166
               

               
Conread position:
               
77-497
               

               
Cow position:
               
chr15:6491243-6491665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 179
               

               
Conread position:
               
77-499
               

               
Cow position:
               
chr15:21837035-21836614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
77-503
               

               
Cow position:
               
chr15:27972869-27973303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 229
               

               
Conread position:
               
77-506
               

               
Cow position:
               
chr15:15215366-15214935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 146
               

               
Conread position:
               
77-508
               

               
Cow position:
               
chr15:34036844-34037270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 113
               

               
Conread position:
               
78-485
               

               
Cow position:
               
chr15:11957878-11957477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
78-504
               

               
Cow position:
               
chr15:2800310-2799901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
79-425
               

               
Cow position:
               
chr15:6462158-6462498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
79-425
               

               
Cow position:
               
chr15:39406078-39405743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 187
               

               
Conread position:
               
79-449
               

               
Cow position:
               
chr15:12723422-12723064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
290, 30
               

               
Conread position:
               
81-504
               

               
Cow position:
               
chr15:39894920-39894518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
28, 53
               

               
Conread position:
               
82-434
               

               
Cow position:
               
chr15:12304980-12304628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
82-449
               

               
Cow position:
               
chr15:39621679-39621313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
84-426
               

               
Cow position:
               
chr15:6627953-6628288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
159, 56
               

               
Conread position:
               
84-426
               

               
Cow position:
               
chr15:10245670-10245996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
264, 104
               

               
Conread position:
               
89-449
               

               
Cow position:
               
chr15:35945876-35945505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
22, 155
               

               
Conread position:
               
89-469
               

               
Cow position:
               
chr15:31857926-31857544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 137
               

               
Conread position:
               
89-470
               

               
Cow position:
               
chr15:42194947-42195310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
89-504
               

               
Cow position:
               
chr15:31545015-31545428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 141
               

               
Conread position:
               
89-506
               

               
Cow position:
               
chr15:30002023-30001596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 206
               

               
Conread position:
               
89-508
               

               
Cow position:
               
chr15:26158284-26158701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
89-508
               

               
Cow position:
               
chr15:47822133-47821731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
90-507
               

               
Cow position:
               
chr15:26573720-26573297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 212
               

               
Conread position:
               
90-508
               

               
Cow position:
               
chr15:43776668-43776269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
261, 18
               

               
Conread position:
               
91-344
               

               
Cow position:
               
chr15:21523118-21522868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
91-414
               

               
Cow position:
               
chr15:41225231-41225553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
83, 133
               

               
Conread position:
               
91-449
               

               
Cow position:
               
chr15:22938445-22938787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
94-459
               

               
Cow position:
               
chr15:26673266-26673616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
94-508
               

               
Cow position:
               
chr15:225474-225905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 89
               

               
Conread position:
               
94-508
               

               
Cow position:
               
chr15:50322924-50322509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
95-301
               

               
Cow position:
               
chr15:38394748-38394538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
95-347
               

               
Cow position:
               
chr15:20401587-20401828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
96-343
               

               
Cow position:
               
chr15:11629555-11629803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
98-396
               

               
Cow position:
               
chr15:5632996-5632710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
98-449
               

               
Cow position:
               
chr15:49922463-49922109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 213
               

               
Conread position:
               
98-452
               

               
Cow position:
               
chr15:45217145-45216811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
98-505
               

               
Cow position:
               
chr15:12163200-12163600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
145, 10
               

               
Conread position:
               
99-497
               

               
Cow position:
               
chr15:26903519-26903102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 95
               

               
Conread position:
               
100-448
               

               
Cow position:
               
chr15:37645294-37644966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
100-503
               

               
Cow position:
               
chr15:35112565-35112970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
101-449
               

               
Cow position:
               
chr15:27900185-27900535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
108-434
               

               
Cow position:
               
chr15:11995712-11996037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
108-507
               

               
Cow position:
               
chr15:22886862-22886475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 58
               

               
Conread position:
               
110-450
               

               
Cow position:
               
chr15:45585038-45584707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 118
               

               
Conread position:
               
115-310
               

               
Cow position:
               
chr15:10846028-10845830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
116-494
               

               
Cow position:
               
chr15:31907955-31907580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
117-449
               

               
Cow position:
               
chr15:44658664-44658338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
118-369
               

               
Cow position:
               
chr15:37777654-37777404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
120-353
               

               
Cow position:
               
chr15:51583523-51583297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 5
               

               
Conread position:
               
120-449
               

               
Cow position:
               
chr15:26918972-26919300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
121-506
               

               
Cow position:
               
chr15:11646189-11646559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 17
               

               
Conread position:
               
121-508
               

               
Cow position:
               
chr15:24411706-24411337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
122-449
               

               
Cow position:
               
chr15:5071801-5072109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
280, 127
               

               
Conread position:
               
124-452
               

               
Cow position:
               
chr15:1804031-1804366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
50, 197
               

               
Conread position:
               
124-508
               

               
Cow position:
               
chr15:25689275-25688882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
48, 7
               

               
Conread position:
               
128-346
               

               
Cow position:
               
chr15:34144862-34145074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
128-364
               

               
Cow position:
               
chr15:36671741-36671980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
46, 98
               

               
Conread position:
               
128-449
               

               
Cow position:
               
chr15:2968626-2968312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
220, 62
               

               
Conread position:
               
131-508
               

               
Cow position:
               
chr15:22854699-22854328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
132-357
               

               
Cow position:
               
chr15:4350311-4350535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 112
               

               
Conread position:
               
132-440
               

               
Cow position:
               
chr15:39373140-39373457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 170
               

               
Conread position:
               
132-508
               

               
Cow position:
               
chr15:9970694-9971062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 44
               

               
Conread position:
               
133-507
               

               
Cow position:
               
chr15:16667211-16667599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
136-397
               

               
Cow position:
               
chr15:16439540-16439803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 137
               

               
Conread position:
               
137-449
               

               
Cow position:
               
chr15:32323922-32324230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
140-449
               

               
Cow position:
               
chr15:7535387-7535680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
145-449
               

               
Cow position:
               
chr15:22871881-22871589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
203, 16
               

               
Conread position:
               
146-389
               

               
Cow position:
               
chr15:38877033-38877268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
203, 15
               

               
Conread position:
               
146-440
               

               
Cow position:
               
chr15:5444253-5443968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
182, 7
               

               
Conread position:
               
146-478
               

               
Cow position:
               
chr15:2141025-2141359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
143, 76
               

               
Conread position:
               
146-487
               

               
Cow position:
               
chr15:53045600-53045940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
148-448
               

               
Cow position:
               
chr15:4296038-4295739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
148-508
               

               
Cow position:
               
chr15:49274227-49273860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
156-451
               

               
Cow position:
               
chr15:30934286-30934570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
156-480
               

               
Cow position:
               
chr15:9001228-9000903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 155
               

               
Conread position:
               
157-368
               

               
Cow position:
               
chr15:16657756-16657547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
65, 7
               

               
Conread position:
               
157-370
               

               
Cow position:
               
chr15:17124769-17124986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
157-439
               

               
Cow position:
               
chr15:44377539-44377259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
176, 132
               

               
Conread position:
               
157-448
               

               
Cow position:
               
chr15:23957967-23957689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
83, 63
               

               
Conread position:
               
157-449
               

               
Cow position:
               
chr15:23572415-23572711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 144
               

               
Conread position:
               
157-479
               

               
Cow position:
               
chr15:245038-244727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
141, 23
               

               
Conread position:
               
160-448
               

               
Cow position:
               
chr15:4178673-4178968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
161-449
               

               
Cow position:
               
chr15:23598052-23598341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
157, 130
               

               
Conread position:
               
161-449
               

               
Cow position:
               
chr15:39316575-39316867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 105
               

               
Conread position:
               
161-460
               

               
Cow position:
               
chr15:36838920-36839209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
162, 59
               

               
Conread position:
               
162-342
               

               
Cow position:
               
chr15:31483712-31483534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
6, 62
               

               
Conread position:
               
163-449
               

               
Cow position:
               
chr15:21821667-21821949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
55, 87
               

               
Conread position:
               
164-391
               

               
Cow position:
               
chr15:33770874-33770651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
164-397
               

               
Cow position:
               
chr15:23115101-23114862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 136
               

               
Conread position:
               
165-464
               

               
Cow position:
               
chr15:40117201-40117488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
137, 75
               

               
Conread position:
               
166-430
               

               
Cow position:
               
chr15:12441570-12441827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
49, 89
               

               
Conread position:
               
166-449
               

               
Cow position:
               
chr15:39619409-39619117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
172-404
               

               
Cow position:
               
chr15:10737500-10737724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
172-423
               

               
Cow position:
               
chr15:11559108-11559354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
176, 23
               

               
Conread position:
               
172-432
               

               
Cow position:
               
chr15:38837995-38837742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
225, 107
               

               
Conread position:
               
172-451
               

               
Cow position:
               
chr15:5726573-5726298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 139
               

               
Conread position:
               
172-451
               

               
Cow position:
               
chr15:10608057-10608331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 41
               

               
Conread position:
               
172-504
               

               
Cow position:
               
chr15:25907157-25906820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
130, 47
               

               
Conread position:
               
172-508
               

               
Cow position:
               
chr15:6905310-6905002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
177, 47
               

               
Conread position:
               
174-449
               

               
Cow position:
               
chr15:25386689-25386414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
51, 111
               

               
Conread position:
               
174-452
               

               
Cow position:
               
chr15:53036722-53036993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
174, 35
               

               
Conread position:
               
176-393
               

               
Cow position:
               
chr15:16018279-16018068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
152, 55
               

               
Conread position:
               
176-448
               

               
Cow position:
               
chr15:18671211-18671478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
176-449
               

               
Cow position:
               
chr15:43788488-43788237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
142, 43
               

               
Conread position:
               
178-508
               

               
Cow position:
               
chr15:37205287-37204968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
170, 42
               

               
Conread position:
               
180-421
               

               
Cow position:
               
chr15:22930099-22930347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 115
               

               
Conread position:
               
181-508
               

               
Cow position:
               
chr15:43612307-43612000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
166, 39
               

               
Conread position:
               
182-410
               

               
Cow position:
               
chr15:7307914-7308143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
185-426
               

               
Cow position:
               
chr15:50089218-50088978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
190-343
               

               
Cow position:
               
chr15:31502572-31502720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
190-413
               

               
Cow position:
               
chr15:38036708-38036936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
191-469
               

               
Cow position:
               
chr15:53716662-53716392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
154, 28
               

               
Conread position:
               
191-508
               

               
Cow position:
               
chr15:37918874-37918562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
36, 6
               

               
Conread position:
               
192-434
               

               
Cow position:
               
chr15:9107265-9107025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
156, 110
               

               
Conread position:
               
192-448
               

               
Cow position:
               
chr15:915617-915865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
192-449
               

               
Cow position:
               
chr15:12870635-12870889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
156, 104
               

               
Conread position:
               
192-449
               

               
Cow position:
               
chr15:14576563-14576303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
121, 28
               

               
Conread position:
               
192-449
               

               
Cow position:
               
chr15:28823590-28823842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
159, 35
               

               
Conread position:
               
192-449
               

               
Cow position:
               
chr15:29331232-29330981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
192-471
               

               
Cow position:
               
chr15:4418172-4418444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
192-506
               

               
Cow position:
               
chr15:24864044-24864345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
157, 28
               

               
Conread position:
               
198-432
               

               
Cow position:
               
chr15:1857950-1857717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
198-443
               

               
Cow position:
               
chr15:43599408-43599170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
199-447
               

               
Cow position:
               
chr15:5567164-5566907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 216
               

               
Conread position:
               
200-508
               

               
Cow position:
               
chr15:10231521-10231845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
201-500
               

               
Cow position:
               
chr15:30470750-30471045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
202-447
               

               
Cow position:
               
chr15:662250-662491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
205-470
               

               
Cow position:
               
chr15:33178209-33178471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
140, 15
               

               
Conread position:
               
205-508
               

               
Cow position:
               
chr15:51307464-51307772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
140, 20
               

               
Conread position:
               
206-451
               

               
Cow position:
               
chr15:5930107-5929870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
208-502
               

               
Cow position:
               
chr15:39326299-39326597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
209-508
               

               
Cow position:
               
chr15:8022261-8021972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
213-508
               

               
Cow position:
               
chr15:4508357-4508067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 93
               

               
Conread position:
               
214-447
               

               
Cow position:
               
chr15:5158581-5158351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
134, 6
               

               
Conread position:
               
215-421
               

               
Cow position:
               
chr15:29900324-29900527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
220-451
               

               
Cow position:
               
chr15:34284210-34284438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
224-449
               

               
Cow position:
               
chr15:35204951-35205177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
129, 78
               

               
Conread position:
               
225-508
               

               
Cow position:
               
chr15:35967292-35967567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
227-452
               

               
Cow position:
               
chr15:10660357-10660583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
227-473
               

               
Cow position:
               
chr15:40498097-40498342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
227-504
               

               
Cow position:
               
chr15:14758057-14758329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
227-508
               

               
Cow position:
               
chr15:6749653-6749929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
227-508
               

               
Cow position:
               
chr15:19950668-19950384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
172, 43
               

               
Conread position:
               
229-448
               

               
Cow position:
               
chr15:12843-12624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 18
               

               
Conread position:
               
229-449
               

               
Cow position:
               
chr15:9465870-9465652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
230-449
               

               
Cow position:
               
chr15:31928707-31928921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
118, 48
               

               
Conread position:
               
230-449
               

               
Cow position:
               
chr15:35440884-35441103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
81, 139
               

               
Conread position:
               
232-408
               

               
Cow position:
               
chr15:37865559-37865382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 66
               

               
Conread position:
               
235-403
               

               
Cow position:
               
chr15:44250840-44250670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
240-503
               

               
Cow position:
               
chr15:44879784-44879527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
100, 73
               

               
Conread position:
               
242-508
               

               
Cow position:
               
chr15:43130495-43130240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
105, 59
               

               
Conread position:
               
243-508
               

               
Cow position:
               
chr15:23109100-23109367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
244-448
               

               
Cow position:
               
chr15:31175978-31175769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 134
               

               
Conread position:
               
244-506
               

               
Cow position:
               
chr15:449883-450132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
248-434
               

               
Cow position:
               
chr15:36793313-36793503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 184
               

               
Conread position:
               
248-449
               

               
Cow position:
               
chr15:41527803-41527997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
250-449
               

               
Cow position:
               
chr15:16908603-16908408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
251-508
               

               
Cow position:
               
chr15:5717883-5717617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
258-508
               

               
Cow position:
               
chr15:47821539-47821295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
259-449
               

               
Cow position:
               
chr15:9497337-9497525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
60, 46
               

               
Conread position:
               
259-449
               

               
Cow position:
               
chr15:14176337-14176524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
259-508
               

               
Cow position:
               
chr15:37284616-37284377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
262-449
               

               
Cow position:
               
chr15:32977685-32977871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
262-508
               

               
Cow position:
               
chr15:19920175-19920412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
118, 40
               

               
Conread position:
               
266-446
               

               
Cow position:
               
chr15:6272732-6272909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
267-448
               

               
Cow position:
               
chr15:44237573-44237393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
268-426
               

               
Cow position:
               
chr15:36618256-36618100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
270-449
               

               
Cow position:
               
chr15:47843937-47844118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
274-451
               

               
Cow position:
               
chr15:50660778-50660596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 177
               

               
Conread position:
               
275-449
               

               
Cow position:
               
chr15:31025138-31024968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
282-443
               

               
Cow position:
               
chr15:44280242-44280083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
290-434
               

               
Cow position:
               
chr15:41583017-41582870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
290-508
               

               
Cow position:
               
chr15:20370595-20370808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
293-446
               

               
Cow position:
               
chr15:31637434-31637279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
297-449
               

               
Cow position:
               
chr15:39520297-39520143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
297-508
               

               
Cow position:
               
chr15:23992974-23992766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
299-508
               

               
Cow position:
               
chr15:30958092-30958294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
302-505
               

               
Cow position:
               
chr15:20778140-20777936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
303-449
               

               
Cow position:
               
chr15:14261135-14261282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
303-452
               

               
Cow position:
               
chr15:31495100-31495251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
305-450
               

               
Cow position:
               
chr15:23719362-23719509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
305-508
               

               
Cow position:
               
chr15:1017626-1017832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
306-448
               

               
Cow position:
               
chr15:36388411-36388267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr15:10303341-10303143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
307-464
               

               
Cow position:
               
chr15:30005196-30005343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
308-507
               

               
Cow position:
               
chr15:38846019-38845823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
310-471
               

               
Cow position:
               
chr15:8427322-8427483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
319-448
               

               
Cow position:
               
chr15:10431920-10431789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
320-449
               

               
Cow position:
               
chr15:18776645-18776776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
327-447
               

               
Cow position:
               
chr15:40309490-40309369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
327-448
               

               
Cow position:
               
chr15:12332573-12332450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
330-426
               

               
Cow position:
               
chr15:37231893-37231991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
330-451
               

               
Cow position:
               
chr15:26529986-26529863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
340-505
               

               
Cow position:
               
chr15:21682005-21681836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
346-473
               

               
Cow position:
               
chr15:31502807-31502935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
346-504
               

               
Cow position:
               
chr15:7059327-7059484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
346-508
               

               
Cow position:
               
chr15:31483448-31483285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
349-508
               

               
Cow position:
               
chr15:51361300-51361140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               
Show alignments to all cow chromosomes.