Cow genome map

Conread name: rpigcf0_008845.y1

Conread position: 10-408
Cow position: chr18:49200291-49200673 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 270
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 54

Conread position: 10-434
Cow position: chr18:55396961-55397365 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 299
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 205, 50

Conread position: 11-382
Cow position: chr18:36912055-36911672 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 273
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 88, 223

Conread position: 12-508
Cow position: chr18:4039823-4040308 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 313
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 52, 120

Conread position: 15-373
Cow position: chr18:35636698-35636342 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 99, 46

Conread position: 15-403
Cow position: chr18:55462060-55461671 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 130

Conread position: 15-434
Cow position: chr18:55505053-55505470 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 46

Conread position: 15-449
Cow position: chr18:3158951-3158514 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 50

Conread position: 15-449
Cow position: chr18:5190030-5189612 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 306
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 206, 124

Conread position: 15-451
Cow position: chr18:4672976-4673387 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 94

Conread position: 15-508
Cow position: chr18:20174481-20173979 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 172

Conread position: 16-288
Cow position: chr18:39709540-39709812 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 93, 212

Conread position: 16-293
Cow position: chr18:35057994-35058267 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 51

Conread position: 16-297
Cow position: chr18:26286563-26286842 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 33, 40

Conread position: 16-306
Cow position: chr18:26572987-26572692 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 190
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 104, 36

Conread position: 16-310
Cow position: chr18:51601670-51601370 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 189
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 16-311
Cow position: chr18:11271008-11270708 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 94

Conread position: 16-336
Cow position: chr18:5570808-5571137 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 52, 80

Conread position: 16-340
Cow position: chr18:4315949-4316282 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 61, 153

Conread position: 16-343
Cow position: chr18:35076037-35076366 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 144

Conread position: 16-343
Cow position: chr18:49161806-49161463 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 301

Conread position: 16-346
Cow position: chr18:47314648-47314304 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 57, 0

Conread position: 16-349
Cow position: chr18:16045350-16045019 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 170

Conread position: 16-356
Cow position: chr18:56151005-56150656 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 8

Conread position: 16-359
Cow position: chr18:24022041-24022378 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 29

Conread position: 16-359
Cow position: chr18:33606280-33606621 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 157

Conread position: 16-362
Cow position: chr18:10861766-10861436 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 93, 45

Conread position: 16-364
Cow position: chr18:26937377-26937711 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 144

Conread position: 16-367
Cow position: chr18:19356520-19356872 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 101, 118

Conread position: 16-369
Cow position: chr18:16418043-16417706 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 95, 45

Conread position: 16-369
Cow position: chr18:32121411-32121067 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 45, 74

Conread position: 16-373
Cow position: chr18:19320628-19320985 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 225
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 269

Conread position: 16-373
Cow position: chr18:43473574-43473932 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 228
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 143

Conread position: 16-373
Cow position: chr18:50114291-50113929 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 232
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 280

Conread position: 16-375
Cow position: chr18:7486902-7487256 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 210

Conread position: 16-386
Cow position: chr18:2774937-2774584 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 240
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 332, 87

Conread position: 16-393
Cow position: chr18:22874523-22874891 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 93, 108

Conread position: 16-395
Cow position: chr18:7947025-7947416 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 263
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 95, 292

Conread position: 16-397
Cow position: chr18:55552615-55552995 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 283

Conread position: 16-399
Cow position: chr18:54574663-54574289 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 27

Conread position: 16-422
Cow position: chr18:40758866-40759261 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 191

Conread position: 16-423
Cow position: chr18:51443778-51443384 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 44

Conread position: 16-434
Cow position: chr18:28101276-28101698 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 210

Conread position: 16-440
Cow position: chr18:21682318-21681901 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 64

Conread position: 16-447
Cow position: chr18:11867003-11867419 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 48

Conread position: 16-448
Cow position: chr18:35797271-35797699 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 209

Conread position: 16-448
Cow position: chr18:42747237-42747668 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 134

Conread position: 16-449
Cow position: chr18:11322239-11322677 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 252

Conread position: 16-449
Cow position: chr18:11377021-11377445 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 34

Conread position: 16-449
Cow position: chr18:21195689-21195254 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 206

Conread position: 16-449
Cow position: chr18:28658258-28657830 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 21

Conread position: 16-449
Cow position: chr18:43284101-43283676 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 45

Conread position: 16-449
Cow position: chr18:45104796-45104357 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 209

Conread position: 16-449
Cow position: chr18:51691818-51691381 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 244

Conread position: 16-450
Cow position: chr18:7955798-7956230 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 89

Conread position: 16-457
Cow position: chr18:22121230-22120796 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 57

Conread position: 16-463
Cow position: chr18:25003227-25002795 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 161

Conread position: 16-469
Cow position: chr18:7359387-7359847 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 60

Conread position: 16-489
Cow position: chr18:33793354-33793816 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 327
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 61, 141

Conread position: 16-503
Cow position: chr18:19645828-19646310 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 45

Conread position: 16-503
Cow position: chr18:29356987-29356479 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 16-504
Cow position: chr18:19850094-19849617 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 49

Conread position: 16-506
Cow position: chr18:10656097-10656578 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 32

Conread position: 16-506
Cow position: chr18:14586826-14586323 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 287

Conread position: 16-506
Cow position: chr18:33299554-33300041 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 38

Conread position: 16-507
Cow position: chr18:16842416-16841913 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 289

Conread position: 16-508
Cow position: chr18:3166826-3166352 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 48

Conread position: 16-508
Cow position: chr18:20125956-20126450 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 45

Conread position: 16-508
Cow position: chr18:29796783-29796290 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 167

Conread position: 17-292
Cow position: chr18:9818491-9818765 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 79, 44

Conread position: 17-368
Cow position: chr18:42966489-42966866 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 264
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 97, 312

Conread position: 17-408
Cow position: chr18:28794415-28794032 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 259
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 101, 159

Conread position: 17-434
Cow position: chr18:34527456-34527029 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 291
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 23

Conread position: 17-449
Cow position: chr18:37023905-37023469 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 86

Conread position: 17-503
Cow position: chr18:17004905-17005391 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 28

Conread position: 17-508
Cow position: chr18:19193694-19193214 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 44

Conread position: 17-508
Cow position: chr18:31672852-31672360 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 72

Conread position: 18-279
Cow position: chr18:215383-215116 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 18-363
Cow position: chr18:21528057-21528397 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 89, 165

Conread position: 18-404
Cow position: chr18:16227211-16227593 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 239

Conread position: 18-432
Cow position: chr18:39662429-39662840 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 18-434
Cow position: chr18:47511646-47512072 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 269

Conread position: 18-436
Cow position: chr18:28768019-28768430 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 120

Conread position: 18-447
Cow position: chr18:52635429-52634991 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 101

Conread position: 18-452
Cow position: chr18:36458586-36459015 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 170

Conread position: 18-508
Cow position: chr18:45961607-45961133 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 105

Conread position: 19-362
Cow position: chr18:55046227-55046572 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 223
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 292

Conread position: 20-397
Cow position: chr18:24956950-24957326 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 282

Conread position: 20-434
Cow position: chr18:56165637-56166047 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 206

Conread position: 20-507
Cow position: chr18:51406238-51405760 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 17

Conread position: 21-434
Cow position: chr18:4182532-4182122 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 40

Conread position: 21-451
Cow position: chr18:56181800-56181373 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 134

Conread position: 21-508
Cow position: chr18:29065719-29065234 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 323
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 36

Conread position: 22-448
Cow position: chr18:51756754-51757173 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 132

Conread position: 22-449
Cow position: chr18:9974669-9974248 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 200

Conread position: 23-302
Cow position: chr18:19159307-19159035 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 88, 132

Conread position: 27-443
Cow position: chr18:44802222-44801814 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 143

Conread position: 27-508
Cow position: chr18:51298141-51298619 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 145

Conread position: 30-508
Cow position: chr18:49100705-49100227 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 37

Conread position: 35-338
Cow position: chr18:52382366-52382672 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 33

Conread position: 36-290
Cow position: chr18:11233101-11233358 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 74, 0

Conread position: 37-404
Cow position: chr18:26535845-26535472 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 253
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 74, 112

Conread position: 37-423
Cow position: chr18:51500409-51500020 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 266
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 41

Conread position: 38-411
Cow position: chr18:29958474-29958121 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 116

Conread position: 39-279
Cow position: chr18:238671-238429 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 127

Conread position: 41-448
Cow position: chr18:19273424-19273016 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 32

Conread position: 47-434
Cow position: chr18:4380976-4381359 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 255
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 37

Conread position: 47-499
Cow position: chr18:52881185-52881614 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 292
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 63

Conread position: 52-383
Cow position: chr18:23652932-23652606 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 172

Conread position: 53-426
Cow position: chr18:26998551-26998943 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 56, 118

Conread position: 54-290
Cow position: chr18:35827726-35827485 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 12

Conread position: 54-300
Cow position: chr18:36445120-36445374 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 55, 158

Conread position: 56-507
Cow position: chr18:26355332-26354884 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 307
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 116, 48

Conread position: 57-300
Cow position: chr18:26586974-26586722 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 57-330
Cow position: chr18:48036471-48036739 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 56

Conread position: 57-434
Cow position: chr18:21103068-21102710 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 259
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 52, 78

Conread position: 58-480
Cow position: chr18:38344497-38344916 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 7

Conread position: 60-508
Cow position: chr18:51587845-51587408 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 41

Conread position: 65-449
Cow position: chr18:18919254-18918879 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 88

Conread position: 65-449
Cow position: chr18:56159164-56159542 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 60

Conread position: 66-506
Cow position: chr18:50700365-50700822 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 161

Conread position: 66-507
Cow position: chr18:29080529-29080950 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 288
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 329, 44

Conread position: 66-508
Cow position: chr18:13359764-13360188 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 12

Conread position: 66-508
Cow position: chr18:36265083-36264623 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 324
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 119, 39

Conread position: 67-343
Cow position: chr18:23808172-23807887 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 128

Conread position: 67-346
Cow position: chr18:11166680-11166957 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 42, 240

Conread position: 67-408
Cow position: chr18:4515728-4516069 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 155

Conread position: 67-449
Cow position: chr18:39875557-39875179 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 68-297
Cow position: chr18:49655417-49655632 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 119

Conread position: 70-312
Cow position: chr18:30673936-30673695 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 184

Conread position: 70-344
Cow position: chr18:48290734-48290465 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 39, 175

Conread position: 70-346
Cow position: chr18:52658123-52658388 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 5, 75

Conread position: 70-448
Cow position: chr18:22214190-22214568 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 76

Conread position: 70-499
Cow position: chr18:4649031-4648629 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 291
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 39, 86

Conread position: 70-499
Cow position: chr18:43114216-43113818 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 296
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 39, 104

Conread position: 70-508
Cow position: chr18:10904550-10905005 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 304
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 88

Conread position: 71-343
Cow position: chr18:11680425-11680697 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 154

Conread position: 71-369
Cow position: chr18:48453399-48453688 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 20

Conread position: 71-449
Cow position: chr18:33157526-33157896 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 124

Conread position: 71-508
Cow position: chr18:9806115-9806559 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 257

Conread position: 71-508
Cow position: chr18:51272035-51271605 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 104

Conread position: 72-439
Cow position: chr18:21175886-21176258 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 156

Conread position: 72-508
Cow position: chr18:50381963-50382408 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 149

Conread position: 73-309
Cow position: chr18:17334710-17334469 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 12, 235

Conread position: 73-435
Cow position: chr18:51211889-51212250 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 38, 152

Conread position: 75-449
Cow position: chr18:20271311-20270933 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 34, 139

Conread position: 75-452
Cow position: chr18:55498775-55499155 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 35

Conread position: 75-506
Cow position: chr18:51537953-51537550 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 292
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 91

Conread position: 77-343
Cow position: chr18:16847409-16847668 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 70

Conread position: 77-359
Cow position: chr18:54658012-54658302 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 25, 67

Conread position: 77-369
Cow position: chr18:268100-267815 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 76

Conread position: 77-399
Cow position: chr18:31725173-31724859 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 31

Conread position: 77-435
Cow position: chr18:23476959-23476620 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 31

Conread position: 77-447
Cow position: chr18:42479869-42479507 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 244
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 273, 27

Conread position: 77-449
Cow position: chr18:5995183-5995549 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 257
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 32, 52

Conread position: 77-508
Cow position: chr18:249092-248675 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 120

Conread position: 77-508
Cow position: chr18:39503974-39503561 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 291
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 152

Conread position: 78-439
Cow position: chr18:43806163-43806522 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 39, 209

Conread position: 79-379
Cow position: chr18:36097914-36098222 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 28, 143

Conread position: 79-397
Cow position: chr18:35537516-35537208 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 60

Conread position: 79-434
Cow position: chr18:47517495-47517138 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 94

Conread position: 79-449
Cow position: chr18:21192697-21192333 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 30, 85

Conread position: 79-507
Cow position: chr18:31586651-31586237 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 115

Conread position: 79-508
Cow position: chr18:26335103-26334666 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 292
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 30, 175

Conread position: 81-447
Cow position: chr18:6610143-6609772 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 76

Conread position: 81-502
Cow position: chr18:42060791-42061209 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 144

Conread position: 82-508
Cow position: chr18:47525122-47525550 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 292
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 27, 74

Conread position: 84-450
Cow position: chr18:51656335-51655960 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 255
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 227

Conread position: 84-508
Cow position: chr18:20127384-20126968 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 135

Conread position: 87-464
Cow position: chr18:1495026-1495399 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 136

Conread position: 89-462
Cow position: chr18:32773602-32773972 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 43

Conread position: 89-469
Cow position: chr18:34325235-34324854 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 259
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 82, 223

Conread position: 89-499
Cow position: chr18:16726369-16726779 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 134

Conread position: 95-364
Cow position: chr18:21205095-21205359 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 20, 76

Conread position: 95-507
Cow position: chr18:4668763-4668349 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 277
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 78

Conread position: 96-434
Cow position: chr18:46048491-46048818 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 113

Conread position: 98-315
Cow position: chr18:39185345-39185557 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 144, 10

Conread position: 98-334
Cow position: chr18:19761430-19761665 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 76

Conread position: 98-397
Cow position: chr18:46437020-46436737 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 13, 45

Conread position: 98-508
Cow position: chr18:5711935-5711518 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 83

Conread position: 99-298
Cow position: chr18:21768360-21768564 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 99-338
Cow position: chr18:1582542-1582302 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 29

Conread position: 101-307
Cow position: chr18:28823232-28823025 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 25

Conread position: 104-508
Cow position: chr18:48713293-48713700 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 276
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 5

Conread position: 108-434
Cow position: chr18:37382354-37382028 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 66, 234

Conread position: 110-346
Cow position: chr18:35582356-35582121 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 83, 110

Conread position: 112-496
Cow position: chr18:22411869-22411484 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 109

Conread position: 113-301
Cow position: chr18:1405562-1405746 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 118

Conread position: 113-327
Cow position: chr18:17670053-17669845 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 109

Conread position: 113-439
Cow position: chr18:23360378-23360699 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 83

Conread position: 113-449
Cow position: chr18:4496139-4495805 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 109, 177

Conread position: 113-508
Cow position: chr18:10322549-10322954 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 75, 59

Conread position: 115-434
Cow position: chr18:25984823-25984510 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 13, 109

Conread position: 115-508
Cow position: chr18:19363683-19364072 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 14

Conread position: 116-449
Cow position: chr18:32883053-32883382 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 108

Conread position: 120-393
Cow position: chr18:12809615-12809879 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 228, 67

Conread position: 125-448
Cow position: chr18:247923-247615 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 26

Conread position: 126-496
Cow position: chr18:24856083-24855716 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 94

Conread position: 127-508
Cow position: chr18:44493708-44493346 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 263
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 106, 40

Conread position: 129-308
Cow position: chr18:14872101-14871925 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 164, 40

Conread position: 130-455
Cow position: chr18:3211632-3211965 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 170

Conread position: 132-463
Cow position: chr18:43020622-43020310 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 216, 56

Conread position: 137-493
Cow position: chr18:2864226-2863854 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 253
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 87, 0

Conread position: 141-434
Cow position: chr18:2619420-2619147 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 79

Conread position: 144-508
Cow position: chr18:23715109-23714731 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 46

Conread position: 145-347
Cow position: chr18:18868529-18868733 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 164, 16

Conread position: 146-344
Cow position: chr18:53962470-53962666 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 163, 15

Conread position: 146-449
Cow position: chr18:48829000-48828694 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 19

Conread position: 146-485
Cow position: chr18:52583777-52584099 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 135, 74

Conread position: 148-404
Cow position: chr18:36123317-36123570 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 26, 66

Conread position: 148-425
Cow position: chr18:36184116-36183849 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 13

Conread position: 157-504
Cow position: chr18:47812262-47812593 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 237
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 65, 39

Conread position: 159-449
Cow position: chr18:7108920-7109209 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 145

Conread position: 161-323
Cow position: chr18:18815881-18815714 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 7, 145

Conread position: 161-448
Cow position: chr18:48451849-48452151 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 135

Conread position: 161-449
Cow position: chr18:1954793-1954508 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 89, 59

Conread position: 161-507
Cow position: chr18:18369566-18369224 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 58

Conread position: 166-508
Cow position: chr18:7415227-7414876 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 54, 132

Conread position: 169-449
Cow position: chr18:36746450-36746178 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 80, 62

Conread position: 172-449
Cow position: chr18:19896648-19896370 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 130

Conread position: 172-449
Cow position: chr18:39434635-39434905 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 176, 41

Conread position: 172-449
Cow position: chr18:51392834-51392562 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 51, 100

Conread position: 174-448
Cow position: chr18:39623608-39623880 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 44, 66

Conread position: 174-451
Cow position: chr18:30341366-30341101 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 46, 30

Conread position: 174-469
Cow position: chr18:27109487-27109192 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 39

Conread position: 174-508
Cow position: chr18:5072601-5072259 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 17

Conread position: 175-425
Cow position: chr18:46276498-46276245 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 165
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 63, 149

Conread position: 175-449
Cow position: chr18:12273464-12273739 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 49, 5

Conread position: 176-432
Cow position: chr18:16686525-16686271 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 173, 43

Conread position: 176-499
Cow position: chr18:22143724-22143382 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 141

Conread position: 177-408
Cow position: chr18:346689-346458 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 74

Conread position: 181-449
Cow position: chr18:4204107-4203849 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 41, 14

Conread position: 186-414
Cow position: chr18:23487847-23488067 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 45

Conread position: 192-434
Cow position: chr18:36201798-36201563 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 160
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 205, 27

Conread position: 192-448
Cow position: chr18:50974468-50974213 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 80

Conread position: 192-449
Cow position: chr18:51676268-51676010 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 40

Conread position: 192-508
Cow position: chr18:5755809-5756118 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 50, 28

Conread position: 196-451
Cow position: chr18:51850728-51850481 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 26, 99

Conread position: 197-507
Cow position: chr18:9154717-9155028 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 143, 23

Conread position: 198-447
Cow position: chr18:43555691-43555445 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 150, 27

Conread position: 199-448
Cow position: chr18:56191136-56190882 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 99, 41

Conread position: 199-476
Cow position: chr18:55747518-55747789 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 102

Conread position: 200-396
Cow position: chr18:4952373-4952183 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 145, 19

Conread position: 201-448
Cow position: chr18:51515430-51515181 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 138, 18

Conread position: 202-404
Cow position: chr18:10117342-10117537 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 146, 19

Conread position: 202-452
Cow position: chr18:4556331-4556086 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 96

Conread position: 206-506
Cow position: chr18:51643528-51643213 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 11, 46

Conread position: 208-432
Cow position: chr18:42751772-42751539 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 89

Conread position: 209-413
Cow position: chr18:19687864-19688069 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 119, 94

Conread position: 213-434
Cow position: chr18:22056032-22055805 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 70, 90

Conread position: 215-449
Cow position: chr18:1571387-1571156 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 182, 76

Conread position: 216-446
Cow position: chr18:23162743-23162964 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 181, 86

Conread position: 220-448
Cow position: chr18:4264536-4264314 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 176, 74

Conread position: 220-506
Cow position: chr18:29474595-29474894 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 129, 82

Conread position: 222-497
Cow position: chr18:21706324-21706055 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 7, 55

Conread position: 224-449
Cow position: chr18:10214337-10214109 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 90

Conread position: 224-449
Cow position: chr18:16997111-16997335 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 37

Conread position: 224-449
Cow position: chr18:48242048-48242273 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 138, 81

Conread position: 225-449
Cow position: chr18:5632125-5632349 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 123, 71

Conread position: 229-426
Cow position: chr18:22274972-22274783 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 119, 67

Conread position: 232-490
Cow position: chr18:32908915-32909169 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 113, 64

Conread position: 244-448
Cow position: chr18:52854929-52855135 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 244-461
Cow position: chr18:35359849-35360060 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 152, 58

Conread position: 249-427
Cow position: chr18:49659995-49659824 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 13

Conread position: 250-449
Cow position: chr18:4871958-4872144 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 46

Conread position: 250-449
Cow position: chr18:49038344-49038543 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 99, 48

Conread position: 250-508
Cow position: chr18:2146701-2146434 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 44, 21

Conread position: 250-508
Cow position: chr18:12584959-12584686 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 253-449
Cow position: chr18:24759768-24759575 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 95, 46

Conread position: 258-447
Cow position: chr18:53642860-53642671 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 90, 129

Conread position: 258-507
Cow position: chr18:37331634-37331390 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 48

Conread position: 259-450
Cow position: chr18:56044450-56044634 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 81, 47

Conread position: 259-460
Cow position: chr18:19765074-19765281 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 21

Conread position: 260-449
Cow position: chr18:24508344-24508150 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 41

Conread position: 263-440
Cow position: chr18:213642-213465 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 86, 43

Conread position: 263-473
Cow position: chr18:40035888-40036094 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 48, 83

Conread position: 266-485
Cow position: chr18:15689185-15689403 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 40

Conread position: 269-482
Cow position: chr18:56301793-56302008 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 80, 37

Conread position: 271-485
Cow position: chr18:2438860-2438645 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 78, 54

Conread position: 271-507
Cow position: chr18:5078870-5078630 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 25

Conread position: 273-508
Cow position: chr18:1190813-1190582 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 23

Conread position: 275-506
Cow position: chr18:38126541-38126312 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 60, 49

Conread position: 276-449
Cow position: chr18:4624237-4624069 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 121, 26

Conread position: 287-489
Cow position: chr18:16298024-16298226 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 16

Conread position: 291-506
Cow position: chr18:43711973-43712184 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 6

Conread position: 292-449
Cow position: chr18:52251935-52251776 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 19, 6

Conread position: 297-448
Cow position: chr18:24342770-24342923 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 9

Conread position: 303-446
Cow position: chr18:46072396-46072541 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 303-506
Cow position: chr18:33843152-33842947 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 21

Conread position: 305-449
Cow position: chr18:47548051-47547906 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 116

Conread position: 307-449
Cow position: chr18:19787916-19788061 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 308-452
Cow position: chr18:11754071-11754214 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 17

Conread position: 308-505
Cow position: chr18:50359269-50359480 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 308-507
Cow position: chr18:47693004-47693211 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 308-508
Cow position: chr18:24719251-24719467 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 309-508
Cow position: chr18:2777814-2777606 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 309-508
Cow position: chr18:26458408-26458213 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 12

Conread position: 310-505
Cow position: chr18:40047558-40047349 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 15

Conread position: 311-507
Cow position: chr18:26372862-26373059 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 13

Conread position: 312-499
Cow position: chr18:26843156-26842967 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 319-502
Cow position: chr18:21139851-21140036 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 79, 0

Conread position: 320-506
Cow position: chr18:6075445-6075252 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 327-449
Cow position: chr18:47410500-47410624 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 340-506
Cow position: chr18:48036789-48036955 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 112

Conread position: 353-473
Cow position: chr18:44408402-44408523 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 354-508
Cow position: chr18:28297879-28297725 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 99

Conread position: 368-508
Cow position: chr18:14431815-14431677 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 390-508
Cow position: chr18:23807618-23807499 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 0

Show alignments to all cow chromosomes.