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Cow genome map

           
Conread name:
           
rpigcf0_008845.y1
        

               
Conread position:
               
11-298
               

               
Cow position:
               
chr20:12808721-12808993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
11-363
               

               
Cow position:
               
chr20:17903879-17904229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
12-298
               

               
Cow position:
               
chr20:19352040-19351744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
15-367
               

               
Cow position:
               
chr20:13450688-13450333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 291
               

               
Conread position:
               
16-296
               

               
Cow position:
               
chr20:5104709-5104434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 154
               

               
Conread position:
               
16-300
               

               
Cow position:
               
chr20:12334108-12334386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
16-302
               

               
Cow position:
               
chr20:17734044-17733762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
155, 34
               

               
Conread position:
               
16-311
               

               
Cow position:
               
chr20:38028268-38027992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
155, 49
               

               
Conread position:
               
16-313
               

               
Cow position:
               
chr20:15577166-15576865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
16-314
               

               
Cow position:
               
chr20:10919590-10919288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 286
               

               
Conread position:
               
16-318
               

               
Cow position:
               
chr20:22920435-22920140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
93, 139
               

               
Conread position:
               
16-321
               

               
Cow position:
               
chr20:18399486-18399793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 277
               

               
Conread position:
               
16-327
               

               
Cow position:
               
chr20:21324839-21325150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
49, 176
               

               
Conread position:
               
16-328
               

               
Cow position:
               
chr20:18413583-18413892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
16-332
               

               
Cow position:
               
chr20:10468799-10469109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
16-343
               

               
Cow position:
               
chr20:3781706-3781374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
51, 210
               

               
Conread position:
               
16-346
               

               
Cow position:
               
chr20:24002054-24002368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
16-361
               

               
Cow position:
               
chr20:18185304-18185635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 139
               

               
Conread position:
               
16-363
               

               
Cow position:
               
chr20:18100144-18100478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
93, 108
               

               
Conread position:
               
16-367
               

               
Cow position:
               
chr20:33540603-33540955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 271
               

               
Conread position:
               
16-373
               

               
Cow position:
               
chr20:21720502-21720861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 250
               

               
Conread position:
               
16-373
               

               
Cow position:
               
chr20:26349295-26349654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
101, 276
               

               
Conread position:
               
16-373
               

               
Cow position:
               
chr20:34458308-34457951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 250
               

               
Conread position:
               
16-377
               

               
Cow position:
               
chr20:9473888-9473530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
16-382
               

               
Cow position:
               
chr20:6571057-6571425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 152
               

               
Conread position:
               
16-399
               

               
Cow position:
               
chr20:6258338-6257953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 208
               

               
Conread position:
               
16-399
               

               
Cow position:
               
chr20:6549743-6549373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
16-411
               

               
Cow position:
               
chr20:8429473-8429866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 48
               

               
Conread position:
               
16-415
               

               
Cow position:
               
chr20:16715129-16715515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
16-419
               

               
Cow position:
               
chr20:38123610-38124014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
16-426
               

               
Cow position:
               
chr20:4621615-4621220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
16-430
               

               
Cow position:
               
chr20:35797331-35797747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 194
               

               
Conread position:
               
16-434
               

               
Cow position:
               
chr20:23792329-23792746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 212
               

               
Conread position:
               
16-434
               

               
Cow position:
               
chr20:36780005-36779587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 173
               

               
Conread position:
               
16-440
               

               
Cow position:
               
chr20:8577972-8578397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 24
               

               
Conread position:
               
16-447
               

               
Cow position:
               
chr20:6096760-6096340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 118
               

               
Conread position:
               
16-448
               

               
Cow position:
               
chr20:13652639-13652211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 54
               

               
Conread position:
               
16-448
               

               
Cow position:
               
chr20:26076813-26077238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 45
               

               
Conread position:
               
16-448
               

               
Cow position:
               
chr20:39728176-39728607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 62
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr20:581203-580763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 212
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr20:3599667-3599241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 209
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr20:6240804-6240364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 213
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr20:9412221-9412645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 92
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr20:17251436-17251874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 93
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr20:18392514-18392114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr20:19236816-19237232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
382, 22
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr20:19751037-19751464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr20:20967082-20967478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 38
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr20:20983750-20984149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 38
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr20:21345127-21345590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 163
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr20:23871090-23870662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 208
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr20:29844770-29845207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 181
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr20:39415480-39415907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
158, 12
               

               
Conread position:
               
16-451
               

               
Cow position:
               
chr20:19459917-19459506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
269, 14
               

               
Conread position:
               
16-451
               

               
Cow position:
               
chr20:21714477-21714927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
16-452
               

               
Cow position:
               
chr20:33144828-33144391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 94
               

               
Conread position:
               
16-455
               

               
Cow position:
               
chr20:6054780-6054346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
16-459
               

               
Cow position:
               
chr20:7110393-7109955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 209
               

               
Conread position:
               
16-469
               

               
Cow position:
               
chr20:24069540-24069981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 71
               

               
Conread position:
               
16-497
               

               
Cow position:
               
chr20:6423690-6424177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 54
               

               
Conread position:
               
16-499
               

               
Cow position:
               
chr20:30817261-30817746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 159
               

               
Conread position:
               
16-499
               

               
Cow position:
               
chr20:34001667-34001192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
16-504
               

               
Cow position:
               
chr20:33170146-33169642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 45
               

               
Conread position:
               
16-505
               

               
Cow position:
               
chr20:35145732-35146245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 306
               

               
Conread position:
               
16-507
               

               
Cow position:
               
chr20:746685-747165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
200, 66
               

               
Conread position:
               
16-507
               

               
Cow position:
               
chr20:18530171-18530649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 206
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr20:14806610-14807117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 32
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr20:19363637-19363153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 137
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr20:38817741-38818223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
89, 45
               

               
Conread position:
               
17-300
               

               
Cow position:
               
chr20:23679421-23679137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 177
               

               
Conread position:
               
17-361
               

               
Cow position:
               
chr20:15761221-15760881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 53
               

               
Conread position:
               
17-396
               

               
Cow position:
               
chr20:19146596-19146981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 280
               

               
Conread position:
               
17-412
               

               
Cow position:
               
chr20:21019291-21019686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 142
               

               
Conread position:
               
17-442
               

               
Cow position:
               
chr20:20202942-20203371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 204
               

               
Conread position:
               
17-448
               

               
Cow position:
               
chr20:31746897-31746480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
380, 140
               

               
Conread position:
               
17-449
               

               
Cow position:
               
chr20:9536863-9537289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 37
               

               
Conread position:
               
17-452
               

               
Cow position:
               
chr20:12996283-12995846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 179
               

               
Conread position:
               
17-500
               

               
Cow position:
               
chr20:9433328-9433808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 90
               

               
Conread position:
               
17-508
               

               
Cow position:
               
chr20:33435436-33434925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 44
               

               
Conread position:
               
17-508
               

               
Cow position:
               
chr20:33532036-33532524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
18-303
               

               
Cow position:
               
chr20:22445909-22445624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 204
               

               
Conread position:
               
18-368
               

               
Cow position:
               
chr20:5077924-5078273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
18-378
               

               
Cow position:
               
chr20:20201719-20202077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
91, 116
               

               
Conread position:
               
18-397
               

               
Cow position:
               
chr20:11176520-11176143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
97, 212
               

               
Conread position:
               
18-408
               

               
Cow position:
               
chr20:22313433-22313044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 127
               

               
Conread position:
               
18-432
               

               
Cow position:
               
chr20:13821855-13821439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 91
               

               
Conread position:
               
18-449
               

               
Cow position:
               
chr20:22959616-22959191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
18-449
               

               
Cow position:
               
chr20:34202374-34202792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 174
               

               
Conread position:
               
18-506
               

               
Cow position:
               
chr20:12582220-12581724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 145
               

               
Conread position:
               
19-363
               

               
Cow position:
               
chr20:7132076-7132420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
83, 279
               

               
Conread position:
               
20-390
               

               
Cow position:
               
chr20:35958378-35958745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 74
               

               
Conread position:
               
22-401
               

               
Cow position:
               
chr20:10884635-10884250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
77, 269
               

               
Conread position:
               
22-452
               

               
Cow position:
               
chr20:398562-398147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
23-382
               

               
Cow position:
               
chr20:13967528-13967167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 153
               

               
Conread position:
               
25-508
               

               
Cow position:
               
chr20:25686619-25686132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
26-508
               

               
Cow position:
               
chr20:9707159-9706703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
27-432
               

               
Cow position:
               
chr20:31799457-31799064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
207, 19
               

               
Conread position:
               
27-508
               

               
Cow position:
               
chr20:7659473-7658991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 67
               

               
Conread position:
               
31-448
               

               
Cow position:
               
chr20:5950889-5950487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
38-508
               

               
Cow position:
               
chr20:35843362-35842913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
39-303
               

               
Cow position:
               
chr20:27314430-27314690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
70, 84
               

               
Conread position:
               
54-449
               

               
Cow position:
               
chr20:10200104-10200503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 203
               

               
Conread position:
               
54-508
               

               
Cow position:
               
chr20:6903092-6903528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 118
               

               
Conread position:
               
55-356
               

               
Cow position:
               
chr20:20312973-20312684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
54, 100
               

               
Conread position:
               
56-430
               

               
Cow position:
               
chr20:15549136-15548759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 170
               

               
Conread position:
               
56-508
               

               
Cow position:
               
chr20:40256734-40257184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
57-370
               

               
Cow position:
               
chr20:27977943-27977626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
58-397
               

               
Cow position:
               
chr20:3331527-3331181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
51, 243
               

               
Conread position:
               
60-508
               

               
Cow position:
               
chr20:40511987-40511538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
63-432
               

               
Cow position:
               
chr20:32578148-32577782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
65-508
               

               
Cow position:
               
chr20:14679392-14679832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
65-508
               

               
Cow position:
               
chr20:20360002-20359568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 134
               

               
Conread position:
               
66-292
               

               
Cow position:
               
chr20:17363913-17363684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
170, 13
               

               
Conread position:
               
66-399
               

               
Cow position:
               
chr20:39019471-39019802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
45, 146
               

               
Conread position:
               
66-434
               

               
Cow position:
               
chr20:3321360-3321002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 29
               

               
Conread position:
               
66-449
               

               
Cow position:
               
chr20:21372090-21372465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 161
               

               
Conread position:
               
66-508
               

               
Cow position:
               
chr20:29805882-29805443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
70-346
               

               
Cow position:
               
chr20:24391766-24392031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 42
               

               
Conread position:
               
70-399
               

               
Cow position:
               
chr20:35009961-35009630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
70-434
               

               
Cow position:
               
chr20:26996313-26996671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 38
               

               
Conread position:
               
70-434
               

               
Cow position:
               
chr20:34597329-34596955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
70-470
               

               
Cow position:
               
chr20:10759686-10759294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
70-498
               

               
Cow position:
               
chr20:4205742-4206181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 156
               

               
Conread position:
               
70-505
               

               
Cow position:
               
chr20:25823063-25823489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
104, 53
               

               
Conread position:
               
71-343
               

               
Cow position:
               
chr20:29633211-29632950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
71-379
               

               
Cow position:
               
chr20:14735457-14735755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 150
               

               
Conread position:
               
71-423
               

               
Cow position:
               
chr20:35897298-35897653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 151
               

               
Conread position:
               
71-448
               

               
Cow position:
               
chr20:34776966-34777336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 109
               

               
Conread position:
               
71-451
               

               
Cow position:
               
chr20:7442344-7441979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
71-496
               

               
Cow position:
               
chr20:10838439-10838012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 158
               

               
Conread position:
               
71-508
               

               
Cow position:
               
chr20:14759884-14759440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
72-343
               

               
Cow position:
               
chr20:6848403-6848680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
40, 189
               

               
Conread position:
               
72-508
               

               
Cow position:
               
chr20:14879567-14880020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 154
               

               
Conread position:
               
73-434
               

               
Cow position:
               
chr20:17845742-17846101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 128
               

               
Conread position:
               
76-297
               

               
Cow position:
               
chr20:9379194-9379417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
76-338
               

               
Cow position:
               
chr20:26469278-26469018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
76-426
               

               
Cow position:
               
chr20:28296075-28296429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
33, 218
               

               
Conread position:
               
77-308
               

               
Cow position:
               
chr20:26679910-26680145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
77-388
               

               
Cow position:
               
chr20:22704074-22704390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 148
               

               
Conread position:
               
77-396
               

               
Cow position:
               
chr20:6890491-6890817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
26, 185
               

               
Conread position:
               
77-451
               

               
Cow position:
               
chr20:11482353-11481976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 223
               

               
Conread position:
               
78-343
               

               
Cow position:
               
chr20:23936628-23936355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
78-422
               

               
Cow position:
               
chr20:20471577-20471913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
80-396
               

               
Cow position:
               
chr20:23505618-23505931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
29, 128
               

               
Conread position:
               
82-370
               

               
Cow position:
               
chr20:11923449-11923171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
82-379
               

               
Cow position:
               
chr20:33176973-33177279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
84-420
               

               
Cow position:
               
chr20:38551167-38551496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
85-508
               

               
Cow position:
               
chr20:24869234-24868804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
30, 140
               

               
Conread position:
               
88-357
               

               
Cow position:
               
chr20:9923396-9923646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
260, 57
               

               
Conread position:
               
89-350
               

               
Cow position:
               
chr20:34240326-34240595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
89-448
               

               
Cow position:
               
chr20:33178728-33178362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 139
               

               
Conread position:
               
95-440
               

               
Cow position:
               
chr20:11542478-11542139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
95-448
               

               
Cow position:
               
chr20:28067621-28067268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 146
               

               
Conread position:
               
95-449
               

               
Cow position:
               
chr20:23846868-23846507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
96-318
               

               
Cow position:
               
chr20:8020700-8020925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 129
               

               
Conread position:
               
96-346
               

               
Cow position:
               
chr20:37272524-37272767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
96-449
               

               
Cow position:
               
chr20:20739484-20739130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
98-448
               

               
Cow position:
               
chr20:6602848-6603197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
98-507
               

               
Cow position:
               
chr20:34107923-34108322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
100-467
               

               
Cow position:
               
chr20:25274467-25274118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
107-504
               

               
Cow position:
               
chr20:31080862-31081251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 26
               

               
Conread position:
               
110-451
               

               
Cow position:
               
chr20:36207623-36207973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 112
               

               
Conread position:
               
112-485
               

               
Cow position:
               
chr20:30648395-30648008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
113-449
               

               
Cow position:
               
chr20:14980691-14980349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 116
               

               
Conread position:
               
117-397
               

               
Cow position:
               
chr20:3740172-3739900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
112, 151
               

               
Conread position:
               
119-451
               

               
Cow position:
               
chr20:21928734-21929064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 190
               

               
Conread position:
               
120-368
               

               
Cow position:
               
chr20:28831794-28832047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
31, 181
               

               
Conread position:
               
120-449
               

               
Cow position:
               
chr20:41627515-41627184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
121-440
               

               
Cow position:
               
chr20:7210867-7211182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
13, 103
               

               
Conread position:
               
122-449
               

               
Cow position:
               
chr20:5814401-5814723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
7, 126
               

               
Conread position:
               
122-452
               

               
Cow position:
               
chr20:14100605-14100275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
126-451
               

               
Cow position:
               
chr20:40446172-40446488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
126-505
               

               
Cow position:
               
chr20:15312496-15312882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
129-321
               

               
Cow position:
               
chr20:9701735-9701545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
131-403
               

               
Cow position:
               
chr20:32988990-32988720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
132-373
               

               
Cow position:
               
chr20:18837318-18837076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 92
               

               
Conread position:
               
134-449
               

               
Cow position:
               
chr20:5636325-5636638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
136-508
               

               
Cow position:
               
chr20:1575946-1576308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 84
               

               
Conread position:
               
139-508
               

               
Cow position:
               
chr20:28441176-28441553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
140-506
               

               
Cow position:
               
chr20:8261758-8262127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
141-505
               

               
Cow position:
               
chr20:4334669-4334307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
141-505
               

               
Cow position:
               
chr20:14917152-14917502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
207, 78
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr20:14540206-14540552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 104
               

               
Conread position:
               
146-441
               

               
Cow position:
               
chr20:14433571-14433272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
70, 157
               

               
Conread position:
               
146-447
               

               
Cow position:
               
chr20:9267239-9266952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 15
               

               
Conread position:
               
148-419
               

               
Cow position:
               
chr20:24234019-24234281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 83
               

               
Conread position:
               
149-443
               

               
Cow position:
               
chr20:36040333-36040626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
150-338
               

               
Cow position:
               
chr20:11355079-11355264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
104, 54
               

               
Conread position:
               
153-448
               

               
Cow position:
               
chr20:34178613-34178322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
154-430
               

               
Cow position:
               
chr20:28955833-28955563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
61, 6
               

               
Conread position:
               
156-506
               

               
Cow position:
               
chr20:311210-311535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 64
               

               
Conread position:
               
157-398
               

               
Cow position:
               
chr20:23643266-23643033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
191, 15
               

               
Conread position:
               
157-411
               

               
Cow position:
               
chr20:32523333-32523583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
157-412
               

               
Cow position:
               
chr20:8098149-8098406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 137
               

               
Conread position:
               
157-426
               

               
Cow position:
               
chr20:21761644-21761909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
191, 74
               

               
Conread position:
               
157-446
               

               
Cow position:
               
chr20:22484728-22485013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 142
               

               
Conread position:
               
157-449
               

               
Cow position:
               
chr20:4332006-4332291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 48
               

               
Conread position:
               
157-505
               

               
Cow position:
               
chr20:5025075-5024735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
161-422
               

               
Cow position:
               
chr20:29404304-29404044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
187, 59
               

               
Conread position:
               
163-393
               

               
Cow position:
               
chr20:28804439-28804670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
118, 15
               

               
Conread position:
               
164-415
               

               
Cow position:
               
chr20:34084938-34085191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 138
               

               
Conread position:
               
165-506
               

               
Cow position:
               
chr20:13494388-13494720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
169-503
               

               
Cow position:
               
chr20:15569066-15568734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
179, 115
               

               
Conread position:
               
170-415
               

               
Cow position:
               
chr20:13794870-13795100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
149, 52
               

               
Conread position:
               
172-365
               

               
Cow position:
               
chr20:27003852-27003652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
172-427
               

               
Cow position:
               
chr20:40449893-40450157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
172-447
               

               
Cow position:
               
chr20:36633700-36633967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 131
               

               
Conread position:
               
172-464
               

               
Cow position:
               
chr20:24833977-24834261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 48
               

               
Conread position:
               
172-508
               

               
Cow position:
               
chr20:23234918-23235246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
174-426
               

               
Cow position:
               
chr20:34221365-34221613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
174-447
               

               
Cow position:
               
chr20:28249068-28249335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
42, 108
               

               
Conread position:
               
174-449
               

               
Cow position:
               
chr20:11188920-11188650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 131
               

               
Conread position:
               
175-424
               

               
Cow position:
               
chr20:12430908-12430667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 18
               

               
Conread position:
               
175-485
               

               
Cow position:
               
chr20:40691942-40692255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
118, 285
               

               
Conread position:
               
175-508
               

               
Cow position:
               
chr20:37028706-37029037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
176-390
               

               
Cow position:
               
chr20:34901459-34901669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
169, 10
               

               
Conread position:
               
176-397
               

               
Cow position:
               
chr20:24000911-24000693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
176-448
               

               
Cow position:
               
chr20:19339986-19339725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
179-433
               

               
Cow position:
               
chr20:10188165-10188414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
169, 43
               

               
Conread position:
               
179-508
               

               
Cow position:
               
chr20:4016144-4016466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
224, 117
               

               
Conread position:
               
184-508
               

               
Cow position:
               
chr20:26077762-26077458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
167, 35
               

               
Conread position:
               
189-389
               

               
Cow position:
               
chr20:21698287-21698490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
156, 115
               

               
Conread position:
               
192-508
               

               
Cow position:
               
chr20:7738323-7738000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
203, 27
               

               
Conread position:
               
192-508
               

               
Cow position:
               
chr20:23103123-23103426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
152, 27
               

               
Conread position:
               
193-427
               

               
Cow position:
               
chr20:33067469-33067225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
193-449
               

               
Cow position:
               
chr20:24711739-24711998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
193-503
               

               
Cow position:
               
chr20:22265341-22265038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
204, 26
               

               
Conread position:
               
198-397
               

               
Cow position:
               
chr20:15118185-15118380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
198-409
               

               
Cow position:
               
chr20:19616395-19616610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
199-419
               

               
Cow position:
               
chr20:15822462-15822676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
199-433
               

               
Cow position:
               
chr20:28594193-28594427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
149, 26
               

               
Conread position:
               
202-425
               

               
Cow position:
               
chr20:17765420-17765198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
204-508
               

               
Cow position:
               
chr20:5644702-5645010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
209-508
               

               
Cow position:
               
chr20:11548803-11548494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
210-434
               

               
Cow position:
               
chr20:33439058-33438838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
213-449
               

               
Cow position:
               
chr20:5078548-5078784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
214-363
               

               
Cow position:
               
chr20:37357531-37357678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 88
               

               
Conread position:
               
214-449
               

               
Cow position:
               
chr20:11008093-11008327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
214-505
               

               
Cow position:
               
chr20:35192702-35192990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
134, 85
               

               
Conread position:
               
215-490
               

               
Cow position:
               
chr20:16491997-16492271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
133, 83
               

               
Conread position:
               
217-434
               

               
Cow position:
               
chr20:23506542-23506327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
131, 77
               

               
Conread position:
               
224-446
               

               
Cow position:
               
chr20:9376402-9376623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
6, 68
               

               
Conread position:
               
227-434
               

               
Cow position:
               
chr20:16548340-16548136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 71
               

               
Conread position:
               
227-434
               

               
Cow position:
               
chr20:20056547-20056344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
121, 75
               

               
Conread position:
               
227-448
               

               
Cow position:
               
chr20:11135828-11135597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
227-449
               

               
Cow position:
               
chr20:354959-354744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
121, 67
               

               
Conread position:
               
228-448
               

               
Cow position:
               
chr20:23850559-23850775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
120, 63
               

               
Conread position:
               
229-448
               

               
Cow position:
               
chr20:11359693-11359476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
5, 73
               

               
Conread position:
               
230-507
               

               
Cow position:
               
chr20:4787074-4786799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
5, 83
               

               
Conread position:
               
233-434
               

               
Cow position:
               
chr20:10772147-10772347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
115, 63
               

               
Conread position:
               
237-449
               

               
Cow position:
               
chr20:39962523-39962732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 62
               

               
Conread position:
               
237-508
               

               
Cow position:
               
chr20:21204307-21204567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
108, 49
               

               
Conread position:
               
242-508
               

               
Cow position:
               
chr20:17397304-17397049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
243-449
               

               
Cow position:
               
chr20:24902345-24902136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
245-449
               

               
Cow position:
               
chr20:20898635-20898433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
105, 38
               

               
Conread position:
               
248-449
               

               
Cow position:
               
chr20:21428118-21428316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
248-455
               

               
Cow position:
               
chr20:6248643-6248438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
248-508
               

               
Cow position:
               
chr20:26750248-26749999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
250-443
               

               
Cow position:
               
chr20:2169761-2169572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
147, 25
               

               
Conread position:
               
250-449
               

               
Cow position:
               
chr20:22030280-22030475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 52
               

               
Conread position:
               
251-449
               

               
Cow position:
               
chr20:40157862-40158057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 51
               

               
Conread position:
               
254-450
               

               
Cow position:
               
chr20:7709821-7709623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
62, 45
               

               
Conread position:
               
254-494
               

               
Cow position:
               
chr20:19865218-19865449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
175, 52
               

               
Conread position:
               
255-505
               

               
Cow position:
               
chr20:42254825-42255071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 48
               

               
Conread position:
               
259-449
               

               
Cow position:
               
chr20:16941321-16941131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
90, 61
               

               
Conread position:
               
262-435
               

               
Cow position:
               
chr20:38850579-38850751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
265-452
               

               
Cow position:
               
chr20:12126329-12126144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
266-508
               

               
Cow position:
               
chr20:5763320-5763079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
298-507
               

               
Cow position:
               
chr20:4934064-4933856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
303-508
               

               
Cow position:
               
chr20:39284974-39285177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
305-508
               

               
Cow position:
               
chr20:17363644-17363443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
308-449
               

               
Cow position:
               
chr20:5703485-5703629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
321-485
               

               
Cow position:
               
chr20:25146810-25146975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
329-508
               

               
Cow position:
               
chr20:2430579-2430754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
331-504
               

               
Cow position:
               
chr20:32892839-32893014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
346-473
               

               
Cow position:
               
chr20:6053415-6053287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
352-508
               

               
Cow position:
               
chr20:13617285-13617445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
353-508
               

               
Cow position:
               
chr20:8445088-8444933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
44, 124
               

               
Conread position:
               
366-508
               

               
Cow position:
               
chr20:29521156-29521019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
369-487
               

               
Cow position:
               
chr20:6571691-6571808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
369-508
               

               
Cow position:
               
chr20:30778509-30778649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
375-503
               

               
Cow position:
               
chr20:21698835-21698964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
407-508
               

               
Cow position:
               
chr20:12430471-12430370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 20
               
Show alignments to all cow chromosomes.