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Cow genome map

           
Conread name:
           
rpigcf0_008845.y1
        

               
Conread position:
               
12-378
               

               
Cow position:
               
chr26:19648625-19648978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
12-439
               

               
Cow position:
               
chr26:29353817-29353391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 215
               

               
Conread position:
               
15-397
               

               
Cow position:
               
chr26:23142399-23142026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
16-284
               

               
Cow position:
               
chr26:6422346-6422072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
16-291
               

               
Cow position:
               
chr26:7961331-7961607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 162
               

               
Conread position:
               
16-297
               

               
Cow position:
               
chr26:31889790-31890075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
91, 49
               

               
Conread position:
               
16-300
               

               
Cow position:
               
chr26:18231068-18231351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
16-301
               

               
Cow position:
               
chr26:8034556-8034851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
16-313
               

               
Cow position:
               
chr26:30806813-30806508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
93, 291
               

               
Conread position:
               
16-342
               

               
Cow position:
               
chr26:23926279-23925963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
16-355
               

               
Cow position:
               
chr26:25737170-25737507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 279
               

               
Conread position:
               
16-369
               

               
Cow position:
               
chr26:2531475-2531132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
92, 59
               

               
Conread position:
               
16-372
               

               
Cow position:
               
chr26:17170237-17170595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 38
               

               
Conread position:
               
16-373
               

               
Cow position:
               
chr26:387663-388019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
158, 92
               

               
Conread position:
               
16-397
               

               
Cow position:
               
chr26:31856402-31856787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
16-399
               

               
Cow position:
               
chr26:21539334-21539715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 151
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr26:8700351-8699943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 211
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr26:32670795-32670392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 84
               

               
Conread position:
               
16-430
               

               
Cow position:
               
chr26:25393732-25394151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
16-434
               

               
Cow position:
               
chr26:13021451-13021029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 210
               

               
Conread position:
               
16-434
               

               
Cow position:
               
chr26:19459374-19459809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
16-434
               

               
Cow position:
               
chr26:32601050-32601466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 70
               

               
Conread position:
               
16-448
               

               
Cow position:
               
chr26:3706502-3706921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr26:8352658-8353100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 213
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr26:20291983-20291561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 118
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr26:21418754-21418326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 175
               

               
Conread position:
               
16-451
               

               
Cow position:
               
chr26:2994971-2994566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
16-451
               

               
Cow position:
               
chr26:9604241-9604695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 202
               

               
Conread position:
               
16-451
               

               
Cow position:
               
chr26:27491803-27491368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 64
               

               
Conread position:
               
16-451
               

               
Cow position:
               
chr26:32776807-32776379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 124
               

               
Conread position:
               
16-503
               

               
Cow position:
               
chr26:3072263-3071779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
16-503
               

               
Cow position:
               
chr26:8651884-8651426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
16-505
               

               
Cow position:
               
chr26:9064041-9064520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 195
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr26:21859517-21860010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 213
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr26:34108469-34108951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
17-310
               

               
Cow position:
               
chr26:5685137-5685444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
47, 146
               

               
Conread position:
               
17-346
               

               
Cow position:
               
chr26:3182238-3181913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
17-451
               

               
Cow position:
               
chr26:6475726-6475296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
18-301
               

               
Cow position:
               
chr26:9867427-9867132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 169
               

               
Conread position:
               
18-361
               

               
Cow position:
               
chr26:18692130-18692463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
33, 28
               

               
Conread position:
               
18-470
               

               
Cow position:
               
chr26:33475374-33475844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
91, 176
               

               
Conread position:
               
18-507
               

               
Cow position:
               
chr26:33044785-33045273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
20-434
               

               
Cow position:
               
chr26:12155403-12155007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
21-449
               

               
Cow position:
               
chr26:6714579-6714171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 167
               

               
Conread position:
               
22-452
               

               
Cow position:
               
chr26:5246784-5246344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
27-350
               

               
Cow position:
               
chr26:6447897-6447566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 76
               

               
Conread position:
               
27-399
               

               
Cow position:
               
chr26:6188006-6188378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
82, 194
               

               
Conread position:
               
27-449
               

               
Cow position:
               
chr26:4363015-4363431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 150
               

               
Conread position:
               
27-452
               

               
Cow position:
               
chr26:12238333-12237895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 193
               

               
Conread position:
               
31-306
               

               
Cow position:
               
chr26:8277858-8277575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
83, 204
               

               
Conread position:
               
32-448
               

               
Cow position:
               
chr26:16549698-16550118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
35-372
               

               
Cow position:
               
chr26:32013348-32013686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 140
               

               
Conread position:
               
37-439
               

               
Cow position:
               
chr26:11134976-11134572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 97
               

               
Conread position:
               
41-449
               

               
Cow position:
               
chr26:23600073-23599669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
30, 143
               

               
Conread position:
               
47-449
               

               
Cow position:
               
chr26:33567311-33566913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
50-508
               

               
Cow position:
               
chr26:16604017-16604481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
54-469
               

               
Cow position:
               
chr26:32058390-32058800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
55-440
               

               
Cow position:
               
chr26:20260327-20260703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
58-308
               

               
Cow position:
               
chr26:32026619-32026374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
60-508
               

               
Cow position:
               
chr26:32898127-32897672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 5
               

               
Conread position:
               
65-508
               

               
Cow position:
               
chr26:9666661-9666227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
66-447
               

               
Cow position:
               
chr26:9104532-9104152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 96
               

               
Conread position:
               
66-508
               

               
Cow position:
               
chr26:23097429-23096985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 178
               

               
Conread position:
               
67-418
               

               
Cow position:
               
chr26:6793891-6794245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
67-448
               

               
Cow position:
               
chr26:8810882-8811257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 115
               

               
Conread position:
               
67-508
               

               
Cow position:
               
chr26:2196840-2196402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
68-505
               

               
Cow position:
               
chr26:18718982-18719440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 263
               

               
Conread position:
               
70-423
               

               
Cow position:
               
chr26:2610047-2609701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
70-449
               

               
Cow position:
               
chr26:4854290-4854675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
70-451
               

               
Cow position:
               
chr26:26294435-26294063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
71-314
               

               
Cow position:
               
chr26:19769331-19769088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 155
               

               
Conread position:
               
71-434
               

               
Cow position:
               
chr26:34256041-34256419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 318
               

               
Conread position:
               
71-436
               

               
Cow position:
               
chr26:7103283-7102927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
30, 156
               

               
Conread position:
               
71-448
               

               
Cow position:
               
chr26:613919-613543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
71-448
               

               
Cow position:
               
chr26:4748103-4747731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 151
               

               
Conread position:
               
71-448
               

               
Cow position:
               
chr26:16921693-16922067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
71-506
               

               
Cow position:
               
chr26:798544-798102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
71-508
               

               
Cow position:
               
chr26:14924253-14924671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
71-508
               

               
Cow position:
               
chr26:33011905-33011473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 33
               

               
Conread position:
               
72-400
               

               
Cow position:
               
chr26:33160742-33160421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
73-369
               

               
Cow position:
               
chr26:8746079-8745772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
26, 154
               

               
Conread position:
               
73-405
               

               
Cow position:
               
chr26:21991872-21992189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
74-504
               

               
Cow position:
               
chr26:35704142-35704577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
31, 152
               

               
Conread position:
               
76-364
               

               
Cow position:
               
chr26:10768141-10767867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
77-491
               

               
Cow position:
               
chr26:17288966-17289367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
77-505
               

               
Cow position:
               
chr26:34314437-34314883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
28, 228
               

               
Conread position:
               
77-508
               

               
Cow position:
               
chr26:2770076-2769653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
77-508
               

               
Cow position:
               
chr26:9632610-9632175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 147
               

               
Conread position:
               
78-350
               

               
Cow position:
               
chr26:9850332-9850066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
78-350
               

               
Cow position:
               
chr26:9853842-9853576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
78-507
               

               
Cow position:
               
chr26:35448819-35449262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
7, 95
               

               
Conread position:
               
79-334
               

               
Cow position:
               
chr26:21351450-21351704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
80-362
               

               
Cow position:
               
chr26:31779237-31779525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 126
               

               
Conread position:
               
81-506
               

               
Cow position:
               
chr26:12668964-12669385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 142
               

               
Conread position:
               
82-449
               

               
Cow position:
               
chr26:17057448-17057810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
84-297
               

               
Cow position:
               
chr26:7224850-7224650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
87-447
               

               
Cow position:
               
chr26:19774533-19774170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 207
               

               
Conread position:
               
89-482
               

               
Cow position:
               
chr26:17204366-17203982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
89-508
               

               
Cow position:
               
chr26:21242876-21243294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
90-382
               

               
Cow position:
               
chr26:1587377-1587648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
90-448
               

               
Cow position:
               
chr26:33744662-33745029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
19, 316
               

               
Conread position:
               
95-508
               

               
Cow position:
               
chr26:5306912-5307326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
95-508
               

               
Cow position:
               
chr26:15211593-15211999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
96-427
               

               
Cow position:
               
chr26:6006267-6005948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 128
               

               
Conread position:
               
96-451
               

               
Cow position:
               
chr26:30254855-30254501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 90
               

               
Conread position:
               
96-508
               

               
Cow position:
               
chr26:21637258-21636844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
98-277
               

               
Cow position:
               
chr26:9102619-9102437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
98-279
               

               
Cow position:
               
chr26:5988936-5988763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
108-449
               

               
Cow position:
               
chr26:10764012-10764342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 121
               

               
Conread position:
               
110-449
               

               
Cow position:
               
chr26:25526041-25526380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 111
               

               
Conread position:
               
110-508
               

               
Cow position:
               
chr26:2987276-2986883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
238, 96
               

               
Conread position:
               
116-403
               

               
Cow position:
               
chr26:20013280-20013561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 58
               

               
Conread position:
               
121-506
               

               
Cow position:
               
chr26:19110708-19111099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 189
               

               
Conread position:
               
124-434
               

               
Cow position:
               
chr26:32672631-32672312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
50, 173
               

               
Conread position:
               
127-449
               

               
Cow position:
               
chr26:6252659-6252987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
45, 168
               

               
Conread position:
               
129-434
               

               
Cow position:
               
chr26:14175095-14175398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
141, 32
               

               
Conread position:
               
132-369
               

               
Cow position:
               
chr26:6723921-6724155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
132-487
               

               
Cow position:
               
chr26:3019611-3019249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
33, 200
               

               
Conread position:
               
133-426
               

               
Cow position:
               
chr26:4167538-4167246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
133-490
               

               
Cow position:
               
chr26:12580200-12579843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
134-275
               

               
Cow position:
               
chr26:27761830-27761689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-461
               

               
Cow position:
               
chr26:31902980-31903309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
13, 161
               

               
Conread position:
               
134-507
               

               
Cow position:
               
chr26:32866069-32865703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 77
               

               
Conread position:
               
140-407
               

               
Cow position:
               
chr26:16179384-16179651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 164
               

               
Conread position:
               
140-432
               

               
Cow position:
               
chr26:30568831-30568550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
256, 21
               

               
Conread position:
               
140-451
               

               
Cow position:
               
chr26:22354238-22354547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 159
               

               
Conread position:
               
140-469
               

               
Cow position:
               
chr26:30605538-30605216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
146-499
               

               
Cow position:
               
chr26:23315602-23315946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
177, 15
               

               
Conread position:
               
147-481
               

               
Cow position:
               
chr26:10292429-10292762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
155-457
               

               
Cow position:
               
chr26:10973951-10974268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr26:22249640-22249282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
161-384
               

               
Cow position:
               
chr26:11270094-11270300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
190, 58
               

               
Conread position:
               
161-422
               

               
Cow position:
               
chr26:23583100-23582841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
132, 58
               

               
Conread position:
               
161-449
               

               
Cow position:
               
chr26:829658-829936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
188, 17
               

               
Conread position:
               
162-448
               

               
Cow position:
               
chr26:22152075-22152357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
164-341
               

               
Cow position:
               
chr26:10608098-10608274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
164-449
               

               
Cow position:
               
chr26:8642795-8643074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
165-450
               

               
Cow position:
               
chr26:2739606-2739323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
174, 42
               

               
Conread position:
               
170-356
               

               
Cow position:
               
chr26:8820008-8819821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
86, 133
               

               
Conread position:
               
170-440
               

               
Cow position:
               
chr26:647865-647604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
224, 49
               

               
Conread position:
               
172-443
               

               
Cow position:
               
chr26:14578183-14578445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
172-446
               

               
Cow position:
               
chr26:28251004-28251284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
172-447
               

               
Cow position:
               
chr26:34060193-34060462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
176, 14
               

               
Conread position:
               
172-504
               

               
Cow position:
               
chr26:12519875-12520213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
174-477
               

               
Cow position:
               
chr26:31633585-31633887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
42, 127
               

               
Conread position:
               
175-508
               

               
Cow position:
               
chr26:27585634-27585961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
176-451
               

               
Cow position:
               
chr26:32834713-32834446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
226, 105
               

               
Conread position:
               
179-508
               

               
Cow position:
               
chr26:14905946-14905609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 14
               

               
Conread position:
               
192-507
               

               
Cow position:
               
chr26:33074622-33074290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
196-449
               

               
Cow position:
               
chr26:7315221-7314977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
200, 24
               

               
Conread position:
               
197-508
               

               
Cow position:
               
chr26:12893539-12893222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
151, 26
               

               
Conread position:
               
198-469
               

               
Cow position:
               
chr26:33253438-33253167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
17, 124
               

               
Conread position:
               
199-425
               

               
Cow position:
               
chr26:3554629-3554396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
207-426
               

               
Cow position:
               
chr26:32832079-32832293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
190, 12
               

               
Conread position:
               
208-449
               

               
Cow position:
               
chr26:24240569-24240810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 12
               

               
Conread position:
               
208-508
               

               
Cow position:
               
chr26:6470380-6470086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 94
               

               
Conread position:
               
214-426
               

               
Cow position:
               
chr26:4807460-4807662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
134, 80
               

               
Conread position:
               
214-449
               

               
Cow position:
               
chr26:6864914-6865155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
215-397
               

               
Cow position:
               
chr26:6486755-6486573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
118, 87
               

               
Conread position:
               
219-443
               

               
Cow position:
               
chr26:18877054-18876837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
129, 75
               

               
Conread position:
               
222-432
               

               
Cow position:
               
chr26:11538440-11538645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
126, 5
               

               
Conread position:
               
224-443
               

               
Cow position:
               
chr26:13818332-13818548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
224-449
               

               
Cow position:
               
chr26:32836149-32836370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
227-447
               

               
Cow position:
               
chr26:678068-677851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
122, 35
               

               
Conread position:
               
227-448
               

               
Cow position:
               
chr26:7687329-7687115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
122, 66
               

               
Conread position:
               
227-508
               

               
Cow position:
               
chr26:6514753-6515040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
122, 77
               

               
Conread position:
               
228-422
               

               
Cow position:
               
chr26:32815880-32815687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
237-499
               

               
Cow position:
               
chr26:34106320-34106573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
242-473
               

               
Cow position:
               
chr26:17155397-17155175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
98, 64
               

               
Conread position:
               
242-508
               

               
Cow position:
               
chr26:1325695-1325949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
244-508
               

               
Cow position:
               
chr26:6451107-6451374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
248-506
               

               
Cow position:
               
chr26:7955786-7956035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
249-476
               

               
Cow position:
               
chr26:19903312-19903537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
34, 30
               

               
Conread position:
               
250-397
               

               
Cow position:
               
chr26:22100849-22100705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
250-508
               

               
Cow position:
               
chr26:14481619-14481359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 43
               

               
Conread position:
               
254-473
               

               
Cow position:
               
chr26:11568033-11567819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
257-449
               

               
Cow position:
               
chr26:33392333-33392525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
258-508
               

               
Cow position:
               
chr26:4421559-4421315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
259-504
               

               
Cow position:
               
chr26:7162473-7162226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
260-420
               

               
Cow position:
               
chr26:22603095-22602936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
260-443
               

               
Cow position:
               
chr26:23624101-23623920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
265-465
               

               
Cow position:
               
chr26:34119090-34118888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
268-508
               

               
Cow position:
               
chr26:9102164-9101923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 162
               

               
Conread position:
               
270-499
               

               
Cow position:
               
chr26:16113236-16113006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
275-449
               

               
Cow position:
               
chr26:25074677-25074848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
286-448
               

               
Cow position:
               
chr26:178198-178364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
297-449
               

               
Cow position:
               
chr26:29664182-29664026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
306-452
               

               
Cow position:
               
chr26:10938958-10939101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
42, 121
               

               
Conread position:
               
312-449
               

               
Cow position:
               
chr26:16435664-16435525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
312-507
               

               
Cow position:
               
chr26:7224350-7224147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 120
               

               
Conread position:
               
322-506
               

               
Cow position:
               
chr26:10137738-10137555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
327-485
               

               
Cow position:
               
chr26:19768799-19768639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
328-449
               

               
Cow position:
               
chr26:7183990-7183866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
332-500
               

               
Cow position:
               
chr26:7387779-7387950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
332-507
               

               
Cow position:
               
chr26:7961952-7962123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
347-507
               

               
Cow position:
               
chr26:13018361-13018196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
348-507
               

               
Cow position:
               
chr26:28446612-28446775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               
Show alignments to all cow chromosomes.