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Cow genome map

           
Conread name:
           
rpigcf0_008845.y1
        

               
Conread position:
               
11-361
               

               
Cow position:
               
chr28:30977969-30978302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
11-369
               

               
Cow position:
               
chr28:15590679-15591014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
160, 62
               

               
Conread position:
               
11-423
               

               
Cow position:
               
chr28:20265059-20265494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
11-447
               

               
Cow position:
               
chr28:25727064-25727489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 97
               

               
Conread position:
               
11-508
               

               
Cow position:
               
chr28:25826180-25825688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 64
               

               
Conread position:
               
12-448
               

               
Cow position:
               
chr28:30293903-30293471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
12-456
               

               
Cow position:
               
chr28:34878286-34877857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
12-473
               

               
Cow position:
               
chr28:32300682-32300219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 220
               

               
Conread position:
               
12-508
               

               
Cow position:
               
chr28:5475340-5474855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
15-320
               

               
Cow position:
               
chr28:2124126-2124420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
211, 92
               

               
Conread position:
               
16-297
               

               
Cow position:
               
chr28:11451787-11451494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
59, 278
               

               
Conread position:
               
16-300
               

               
Cow position:
               
chr28:19295674-19295387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
16-307
               

               
Cow position:
               
chr28:12049025-12048723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
48, 101
               

               
Conread position:
               
16-312
               

               
Cow position:
               
chr28:23685981-23686282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 250
               

               
Conread position:
               
16-336
               

               
Cow position:
               
chr28:7590495-7590177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 26
               

               
Conread position:
               
16-346
               

               
Cow position:
               
chr28:4022070-4022402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
16-346
               

               
Cow position:
               
chr28:15375134-15374809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
16-357
               

               
Cow position:
               
chr28:5553238-5552912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
332, 107
               

               
Conread position:
               
16-362
               

               
Cow position:
               
chr28:25556275-25555935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
101, 128
               

               
Conread position:
               
16-367
               

               
Cow position:
               
chr28:25683266-25682913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
101, 276
               

               
Conread position:
               
16-370
               

               
Cow position:
               
chr28:9851324-9851652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
16-373
               

               
Cow position:
               
chr28:1957306-1957665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
101, 276
               

               
Conread position:
               
16-373
               

               
Cow position:
               
chr28:5335571-5335213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
16-373
               

               
Cow position:
               
chr28:16598090-16598451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 38
               

               
Conread position:
               
16-373
               

               
Cow position:
               
chr28:20966719-20966360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
101, 289
               

               
Conread position:
               
16-379
               

               
Cow position:
               
chr28:16401585-16401947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
16-384
               

               
Cow position:
               
chr28:18462936-18462559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
16-384
               

               
Cow position:
               
chr28:18717437-18717077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
16-393
               

               
Cow position:
               
chr28:12942080-12942440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
227, 28
               

               
Conread position:
               
16-397
               

               
Cow position:
               
chr28:12946633-12947015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 17
               

               
Conread position:
               
16-399
               

               
Cow position:
               
chr28:5361327-5360944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 222
               

               
Conread position:
               
16-399
               

               
Cow position:
               
chr28:7549374-7548989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 201
               

               
Conread position:
               
16-399
               

               
Cow position:
               
chr28:26727724-26727350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
151, 100
               

               
Conread position:
               
16-402
               

               
Cow position:
               
chr28:18790700-18791090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
16-404
               

               
Cow position:
               
chr28:10642328-10641960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
16-414
               

               
Cow position:
               
chr28:25806285-25806658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
332, 43
               

               
Conread position:
               
16-415
               

               
Cow position:
               
chr28:16686722-16687111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 54
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr28:4536159-4536551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
16-425
               

               
Cow position:
               
chr28:21380569-21380974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 73
               

               
Conread position:
               
16-426
               

               
Cow position:
               
chr28:8347410-8347827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
79, 167
               

               
Conread position:
               
16-426
               

               
Cow position:
               
chr28:10606924-10606538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
191, 68
               

               
Conread position:
               
16-432
               

               
Cow position:
               
chr28:23530552-23530975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
95, 124
               

               
Conread position:
               
16-433
               

               
Cow position:
               
chr28:13693437-13693852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 129
               

               
Conread position:
               
16-434
               

               
Cow position:
               
chr28:5684392-5684806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
93, 185
               

               
Conread position:
               
16-435
               

               
Cow position:
               
chr28:4282804-4282386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 230
               

               
Conread position:
               
16-439
               

               
Cow position:
               
chr28:26684803-26685225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 38
               

               
Conread position:
               
16-447
               

               
Cow position:
               
chr28:25701172-25700748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
31, 95
               

               
Conread position:
               
16-448
               

               
Cow position:
               
chr28:4308210-4307779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
16-448
               

               
Cow position:
               
chr28:8787238-8787657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 93
               

               
Conread position:
               
16-448
               

               
Cow position:
               
chr28:11752456-11752021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 5
               

               
Conread position:
               
16-448
               

               
Cow position:
               
chr28:19222457-19222033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 208
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr28:5203893-5204314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr28:7684988-7684585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr28:7698289-7697863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr28:9285676-9285258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr28:9426654-9426231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 133
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr28:14933650-14934077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 302
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr28:21844644-21845076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 208
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr28:25399578-25399987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr28:28766222-28765784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 241
               

               
Conread position:
               
16-449
               

               
Cow position:
               
chr28:33884098-33884520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
16-451
               

               
Cow position:
               
chr28:20312962-20313398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 119
               

               
Conread position:
               
16-452
               

               
Cow position:
               
chr28:13473995-13474421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
16-461
               

               
Cow position:
               
chr28:11585519-11585068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 8
               

               
Conread position:
               
16-469
               

               
Cow position:
               
chr28:6971651-6971209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 154
               

               
Conread position:
               
16-490
               

               
Cow position:
               
chr28:21598565-21598092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 204
               

               
Conread position:
               
16-494
               

               
Cow position:
               
chr28:3769982-3769507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 143
               

               
Conread position:
               
16-504
               

               
Cow position:
               
chr28:3914398-3914897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 212
               

               
Conread position:
               
16-506
               

               
Cow position:
               
chr28:25563766-25564258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr28:3144199-3143689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 45
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr28:7865019-7865501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 45
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr28:10589341-10588837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 124
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr28:13267469-13267965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
17-307
               

               
Cow position:
               
chr28:14493230-14493521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
50, 153
               

               
Conread position:
               
17-369
               

               
Cow position:
               
chr28:17287917-17288254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
17-372
               

               
Cow position:
               
chr28:15007851-15008213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
17-506
               

               
Cow position:
               
chr28:15677589-15678062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 44
               

               
Conread position:
               
17-508
               

               
Cow position:
               
chr28:5826637-5827127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 132
               

               
Conread position:
               
17-508
               

               
Cow position:
               
chr28:23675837-23676310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
17-508
               

               
Cow position:
               
chr28:24343061-24343549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 56
               

               
Conread position:
               
18-295
               

               
Cow position:
               
chr28:10478635-10478375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
18-423
               

               
Cow position:
               
chr28:10035106-10035479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
18-434
               

               
Cow position:
               
chr28:8022421-8021999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 50
               

               
Conread position:
               
18-434
               

               
Cow position:
               
chr28:14997754-14998171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 104
               

               
Conread position:
               
18-508
               

               
Cow position:
               
chr28:16215201-16214689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
156, 263
               

               
Conread position:
               
19-397
               

               
Cow position:
               
chr28:34443073-34442692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
90, 282
               

               
Conread position:
               
21-434
               

               
Cow position:
               
chr28:10616257-10615843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
21-469
               

               
Cow position:
               
chr28:6059774-6059329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
21-508
               

               
Cow position:
               
chr28:25249066-25249531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 43
               

               
Conread position:
               
22-506
               

               
Cow position:
               
chr28:18139762-18139277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 203
               

               
Conread position:
               
24-319
               

               
Cow position:
               
chr28:34082322-34082026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
150, 84
               

               
Conread position:
               
27-426
               

               
Cow position:
               
chr28:16412447-16412849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
27-433
               

               
Cow position:
               
chr28:2814800-2814406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 110
               

               
Conread position:
               
27-445
               

               
Cow position:
               
chr28:5792404-5792824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
30-508
               

               
Cow position:
               
chr28:23008026-23007546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 142
               

               
Conread position:
               
33-449
               

               
Cow position:
               
chr28:26922667-26922249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 176
               

               
Conread position:
               
33-469
               

               
Cow position:
               
chr28:24966093-24966524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 161
               

               
Conread position:
               
34-349
               

               
Cow position:
               
chr28:9390659-9390346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 190
               

               
Conread position:
               
35-434
               

               
Cow position:
               
chr28:7228677-7228286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
36-451
               

               
Cow position:
               
chr28:5817555-5817963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 87
               

               
Conread position:
               
37-426
               

               
Cow position:
               
chr28:31110296-31109908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 264
               

               
Conread position:
               
41-346
               

               
Cow position:
               
chr28:22171006-22170695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
42-447
               

               
Cow position:
               
chr28:18354606-18354210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
42-448
               

               
Cow position:
               
chr28:661835-662226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 67
               

               
Conread position:
               
45-508
               

               
Cow position:
               
chr28:18934170-18934631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
46-343
               

               
Cow position:
               
chr28:26784750-26784452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 262
               

               
Conread position:
               
46-449
               

               
Cow position:
               
chr28:26743340-26743745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 145
               

               
Conread position:
               
48-457
               

               
Cow position:
               
chr28:12047174-12046786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
49-449
               

               
Cow position:
               
chr28:29199448-29199849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
59, 145
               

               
Conread position:
               
51-507
               

               
Cow position:
               
chr28:23410601-23410139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
55-508
               

               
Cow position:
               
chr28:34199370-34198932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
57-505
               

               
Cow position:
               
chr28:616132-616562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 79
               

               
Conread position:
               
62-395
               

               
Cow position:
               
chr28:22484983-22485317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
65-505
               

               
Cow position:
               
chr28:20963795-20963354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 127
               

               
Conread position:
               
65-508
               

               
Cow position:
               
chr28:30608446-30608001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 157
               

               
Conread position:
               
66-373
               

               
Cow position:
               
chr28:16253117-16252814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
66-420
               

               
Cow position:
               
chr28:8408473-8408824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
66-504
               

               
Cow position:
               
chr28:9177016-9176586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 135
               

               
Conread position:
               
66-507
               

               
Cow position:
               
chr28:23459876-23460339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 228
               

               
Conread position:
               
66-508
               

               
Cow position:
               
chr28:24996849-24996422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
67-449
               

               
Cow position:
               
chr28:19026264-19025886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
67-449
               

               
Cow position:
               
chr28:34229968-34230347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 216
               

               
Conread position:
               
68-505
               

               
Cow position:
               
chr28:14508626-14508194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
69-507
               

               
Cow position:
               
chr28:21502136-21502577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 181
               

               
Conread position:
               
70-313
               

               
Cow position:
               
chr28:16244017-16243772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
39, 95
               

               
Conread position:
               
70-437
               

               
Cow position:
               
chr28:23621290-23621646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 151
               

               
Conread position:
               
70-487
               

               
Cow position:
               
chr28:14494574-14494983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
71-319
               

               
Cow position:
               
chr28:28414413-28414664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
109, 153
               

               
Conread position:
               
71-379
               

               
Cow position:
               
chr28:15498475-15498157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
38, 194
               

               
Conread position:
               
71-449
               

               
Cow position:
               
chr28:27218063-27218441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 155
               

               
Conread position:
               
71-504
               

               
Cow position:
               
chr28:13865588-13866015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
71-508
               

               
Cow position:
               
chr28:26719103-26719526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
72-434
               

               
Cow position:
               
chr28:2862605-2862972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 153
               

               
Conread position:
               
74-434
               

               
Cow position:
               
chr28:19080102-19079742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
35, 212
               

               
Conread position:
               
75-449
               

               
Cow position:
               
chr28:22321169-22321538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 227
               

               
Conread position:
               
77-322
               

               
Cow position:
               
chr28:23775793-23776038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 149
               

               
Conread position:
               
77-346
               

               
Cow position:
               
chr28:5773391-5773650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
77-368
               

               
Cow position:
               
chr28:13607634-13607925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
77-508
               

               
Cow position:
               
chr28:1099893-1099481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
78-298
               

               
Cow position:
               
chr28:28076654-28076439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
79-449
               

               
Cow position:
               
chr28:2898746-2899108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 221
               

               
Conread position:
               
79-449
               

               
Cow position:
               
chr28:5236849-5236485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
80-415
               

               
Cow position:
               
chr28:10529731-10529405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
81-290
               

               
Cow position:
               
chr28:17625381-17625169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
87-287
               

               
Cow position:
               
chr28:2090925-2091132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
89-395
               

               
Cow position:
               
chr28:4914341-4914027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 219
               

               
Conread position:
               
89-452
               

               
Cow position:
               
chr28:9636696-9636335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
21, 136
               

               
Conread position:
               
89-468
               

               
Cow position:
               
chr28:11501131-11500747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
89-471
               

               
Cow position:
               
chr28:26220022-26220395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
91-279
               

               
Cow position:
               
chr28:9294776-9294966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
24, 64
               

               
Conread position:
               
91-286
               

               
Cow position:
               
chr28:5658317-5658510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
92-438
               

               
Cow position:
               
chr28:16204570-16204226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 134
               

               
Conread position:
               
94-449
               

               
Cow position:
               
chr28:5144757-5144402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 156
               

               
Conread position:
               
96-293
               

               
Cow position:
               
chr28:3077761-3077955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
96-451
               

               
Cow position:
               
chr28:11884755-11884400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
98-442
               

               
Cow position:
               
chr28:4841626-4841278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
9, 133
               

               
Conread position:
               
98-507
               

               
Cow position:
               
chr28:9099704-9100123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
11, 108
               

               
Conread position:
               
99-302
               

               
Cow position:
               
chr28:8656965-8656765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
99-449
               

               
Cow position:
               
chr28:750997-751344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
73, 197
               

               
Conread position:
               
110-425
               

               
Cow position:
               
chr28:18625006-18625329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
64, 197
               

               
Conread position:
               
110-507
               

               
Cow position:
               
chr28:10053555-10053137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 194
               

               
Conread position:
               
113-423
               

               
Cow position:
               
chr28:4098632-4098923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
115-471
               

               
Cow position:
               
chr28:11818172-11817823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
115-484
               

               
Cow position:
               
chr28:11006965-11007354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
59, 209
               

               
Conread position:
               
117-448
               

               
Cow position:
               
chr28:5437301-5436971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
57, 106
               

               
Conread position:
               
117-485
               

               
Cow position:
               
chr28:15082134-15081767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 8
               

               
Conread position:
               
117-508
               

               
Cow position:
               
chr28:5074714-5074325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
282, 52
               

               
Conread position:
               
126-361
               

               
Cow position:
               
chr28:25459325-25459564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
126-451
               

               
Cow position:
               
chr28:14512325-14512653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 40
               

               
Conread position:
               
127-394
               

               
Cow position:
               
chr28:27313948-27313669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 150
               

               
Conread position:
               
132-449
               

               
Cow position:
               
chr28:4881440-4881121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 172
               

               
Conread position:
               
135-402
               

               
Cow position:
               
chr28:10999860-10999598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
135-451
               

               
Cow position:
               
chr28:26982938-26982617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 170
               

               
Conread position:
               
137-508
               

               
Cow position:
               
chr28:23724645-23724273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
47, 89
               

               
Conread position:
               
138-506
               

               
Cow position:
               
chr28:21570001-21570351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
146-343
               

               
Cow position:
               
chr28:118231-118039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
146-346
               

               
Cow position:
               
chr28:19023957-19024159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
146-502
               

               
Cow position:
               
chr28:2132098-2131752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
169, 15
               

               
Conread position:
               
146-507
               

               
Cow position:
               
chr28:11866845-11866473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
155-402
               

               
Cow position:
               
chr28:17235900-17235664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
156-449
               

               
Cow position:
               
chr28:4643932-4643651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
192, 5
               

               
Conread position:
               
157-434
               

               
Cow position:
               
chr28:20409223-20409491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
191, 62
               

               
Conread position:
               
157-484
               

               
Cow position:
               
chr28:32365681-32365995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
162, 10
               

               
Conread position:
               
157-485
               

               
Cow position:
               
chr28:23668953-23668626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr28:6643446-6643103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 63
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr28:17362756-17362424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
242, 15
               

               
Conread position:
               
158-367
               

               
Cow position:
               
chr28:28903836-28903627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
159-451
               

               
Cow position:
               
chr28:18186392-18186676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
190, 26
               

               
Conread position:
               
161-450
               

               
Cow position:
               
chr28:2752662-2752374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
161-471
               

               
Cow position:
               
chr28:2523760-2524081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
162-451
               

               
Cow position:
               
chr28:1632819-1632536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
164-508
               

               
Cow position:
               
chr28:21046730-21046393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
185, 83
               

               
Conread position:
               
165-451
               

               
Cow position:
               
chr28:18760208-18759934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
183, 54
               

               
Conread position:
               
168-449
               

               
Cow position:
               
chr28:13090688-13090407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
171-508
               

               
Cow position:
               
chr28:33285268-33284932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 56
               

               
Conread position:
               
172-448
               

               
Cow position:
               
chr28:24082116-24082388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
172-508
               

               
Cow position:
               
chr28:4763723-4764054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
172-508
               

               
Cow position:
               
chr28:22571815-22571488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 7
               

               
Conread position:
               
173-409
               

               
Cow position:
               
chr28:15577414-15577183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
175-508
               

               
Cow position:
               
chr28:30746879-30746542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
170, 45
               

               
Conread position:
               
191-434
               

               
Cow position:
               
chr28:1538033-1538265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
193-434
               

               
Cow position:
               
chr28:5193187-5193436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
109, 8
               

               
Conread position:
               
194-461
               

               
Cow position:
               
chr28:5406421-5406681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
196-422
               

               
Cow position:
               
chr28:3449169-3449395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
196-448
               

               
Cow position:
               
chr28:7009105-7008860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
152, 23
               

               
Conread position:
               
196-470
               

               
Cow position:
               
chr28:8140352-8140620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
152, 23
               

               
Conread position:
               
196-479
               

               
Cow position:
               
chr28:32845064-32844784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
197-505
               

               
Cow position:
               
chr28:11346614-11346296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
151, 93
               

               
Conread position:
               
198-449
               

               
Cow position:
               
chr28:27161460-27161208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
17, 111
               

               
Conread position:
               
202-449
               

               
Cow position:
               
chr28:32174507-32174748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
210-403
               

               
Cow position:
               
chr28:3726766-3726957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
46, 105
               

               
Conread position:
               
215-449
               

               
Cow position:
               
chr28:3011385-3011151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
133, 87
               

               
Conread position:
               
215-449
               

               
Cow position:
               
chr28:24706790-24707016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
215-508
               

               
Cow position:
               
chr28:1202354-1202069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
220-508
               

               
Cow position:
               
chr28:32366344-32366075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
129, 29
               

               
Conread position:
               
223-503
               

               
Cow position:
               
chr28:19253374-19253650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
224-405
               

               
Cow position:
               
chr28:12363264-12363082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 76
               

               
Conread position:
               
227-508
               

               
Cow position:
               
chr28:19564328-19564039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
227-508
               

               
Cow position:
               
chr28:26372630-26372917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
90, 129
               

               
Conread position:
               
233-506
               

               
Cow position:
               
chr28:9237219-9237489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
233-508
               

               
Cow position:
               
chr28:7540254-7539981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
117, 68
               

               
Conread position:
               
237-448
               

               
Cow position:
               
chr28:8147952-8147746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
237-449
               

               
Cow position:
               
chr28:11559724-11559513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
113, 25
               

               
Conread position:
               
242-469
               

               
Cow position:
               
chr28:7388853-7388632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
243-449
               

               
Cow position:
               
chr28:30865335-30865536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
244-449
               

               
Cow position:
               
chr28:7350574-7350773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 49
               

               
Conread position:
               
244-508
               

               
Cow position:
               
chr28:7619236-7618964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
105, 71
               

               
Conread position:
               
249-449
               

               
Cow position:
               
chr28:17601630-17601435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
250-427
               

               
Cow position:
               
chr28:3161031-3160857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
250-471
               

               
Cow position:
               
chr28:25677424-25677199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 47
               

               
Conread position:
               
251-497
               

               
Cow position:
               
chr28:32370950-32370705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
257-508
               

               
Cow position:
               
chr28:3411062-3410793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
257-508
               

               
Cow position:
               
chr28:31166056-31165805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
92, 55
               

               
Conread position:
               
258-508
               

               
Cow position:
               
chr28:17012361-17012109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 42
               

               
Conread position:
               
259-449
               

               
Cow position:
               
chr28:20759770-20759583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
260-405
               

               
Cow position:
               
chr28:21262967-21263115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
48, 131
               

               
Conread position:
               
262-469
               

               
Cow position:
               
chr28:4823541-4823743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
263-448
               

               
Cow position:
               
chr28:4765611-4765794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
268-482
               

               
Cow position:
               
chr28:7805484-7805270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
275-449
               

               
Cow position:
               
chr28:5650790-5650619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
275-498
               

               
Cow position:
               
chr28:20275074-20275295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
277-508
               

               
Cow position:
               
chr28:2762143-2762368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
282-448
               

               
Cow position:
               
chr28:3726259-3726091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
285-449
               

               
Cow position:
               
chr28:7498192-7498028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
285-499
               

               
Cow position:
               
chr28:7156791-7157003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
291-508
               

               
Cow position:
               
chr28:9294532-9294315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
299-449
               

               
Cow position:
               
chr28:2772678-2772829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
301-508
               

               
Cow position:
               
chr28:24500175-24500384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
305-451
               

               
Cow position:
               
chr28:18770057-18770201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 77
               

               
Conread position:
               
306-434
               

               
Cow position:
               
chr28:21008691-21008562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
311-449
               

               
Cow position:
               
chr28:8149653-8149513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
312-437
               

               
Cow position:
               
chr28:555484-555611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
316-508
               

               
Cow position:
               
chr28:16041233-16041047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
331-508
               

               
Cow position:
               
chr28:3823136-3822964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
353-508
               

               
Cow position:
               
chr28:6578093-6578247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
353-508
               

               
Cow position:
               
chr28:34749757-34749913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
365-508
               

               
Cow position:
               
chr28:24700807-24700950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
369-508
               

               
Cow position:
               
chr28:13061666-13061807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 18
               
Show alignments to all cow chromosomes.