Non-Coding RNA Search

Cow genome map


           Conread name:
           rpigcf0_008845.y1
        

               Conread position:
               10-399
               

               Cow position:
               chr3:78023626-78023235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               99, 282
               

               Conread position:
               11-440
               

               Cow position:
               chr3:2506825-2506398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 71
               

               Conread position:
               12-311
               

               Cow position:
               chr3:38497599-38497898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               63, 197
               

               Conread position:
               12-370
               

               Cow position:
               chr3:66649787-66649431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 56
               

               Conread position:
               12-399
               

               Cow position:
               chr3:35299329-35299707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 159
               

               Conread position:
               12-427
               

               Cow position:
               chr3:59798909-59799316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 175
               

               Conread position:
               12-433
               

               Cow position:
               chr3:15685255-15684848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 97
               

               Conread position:
               12-487
               

               Cow position:
               chr3:36204205-36204680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 138
               

               Conread position:
               12-508
               

               Cow position:
               chr3:37486133-37485653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 127
               

               Conread position:
               13-448
               

               Cow position:
               chr3:7678334-7678741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               296
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               335, 15
               

               Conread position:
               14-439
               

               Cow position:
               chr3:4222976-4223379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               95, 37
               

               Conread position:
               15-448
               

               Cow position:
               chr3:48296369-48296787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               333, 210
               

               Conread position:
               15-449
               

               Cow position:
               chr3:65413629-65413187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 155
               

               Conread position:
               15-507
               

               Cow position:
               chr3:30179742-30180249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 58
               

               Conread position:
               16-284
               

               Cow position:
               chr3:46856553-46856280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               16-286
               

               Cow position:
               chr3:55117310-55117035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               93, 49
               

               Conread position:
               16-300
               

               Cow position:
               chr3:31903449-31903170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               16-304
               

               Cow position:
               chr3:22872393-22872099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               16-305
               

               Cow position:
               chr3:33633227-33632943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               93, 74
               

               Conread position:
               16-308
               

               Cow position:
               chr3:12323727-12324026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               93, 71
               

               Conread position:
               16-309
               

               Cow position:
               chr3:22954190-22953906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               99, 66
               

               Conread position:
               16-310
               

               Cow position:
               chr3:37894651-37894952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               16-312
               

               Cow position:
               chr3:64198140-64198440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               104, 63
               

               Conread position:
               16-321
               

               Cow position:
               chr3:22021312-22021010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               99, 12
               

               Conread position:
               16-333
               

               Cow position:
               chr3:61191258-61190952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               85, 123
               

               Conread position:
               16-349
               

               Cow position:
               chr3:17952315-17952646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 158
               

               Conread position:
               16-354
               

               Cow position:
               chr3:61678350-61678699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               91, 173
               

               Conread position:
               16-356
               

               Cow position:
               chr3:57554186-57553852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 30
               

               Conread position:
               16-362
               

               Cow position:
               chr3:27544675-27544331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               251
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               61, 38
               

               Conread position:
               16-362
               

               Cow position:
               chr3:36861283-36860935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               101, 276
               

               Conread position:
               16-362
               

               Cow position:
               chr3:49975702-49975354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               101, 250
               

               Conread position:
               16-363
               

               Cow position:
               chr3:79208332-79207983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               87, 54
               

               Conread position:
               16-369
               

               Cow position:
               chr3:8148003-8147658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               332, 36
               

               Conread position:
               16-373
               

               Cow position:
               chr3:16619926-16619570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 250
               

               Conread position:
               16-373
               

               Cow position:
               chr3:43463631-43463266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               16-373
               

               Cow position:
               chr3:46128311-46127952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               101, 250
               

               Conread position:
               16-373
               

               Cow position:
               chr3:66887365-66887006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               101, 275
               

               Conread position:
               16-378
               

               Cow position:
               chr3:77226981-77227338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 30
               

               Conread position:
               16-379
               

               Cow position:
               chr3:39328071-39328419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               332, 86
               

               Conread position:
               16-393
               

               Cow position:
               chr3:5851268-5850896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 208
               

               Conread position:
               16-393
               

               Cow position:
               chr3:43528578-43528199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 205
               

               Conread position:
               16-395
               

               Cow position:
               chr3:53573091-53572717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 163
               

               Conread position:
               16-395
               

               Cow position:
               chr3:79592229-79591856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               93, 43
               

               Conread position:
               16-397
               

               Cow position:
               chr3:72174188-72173805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               101, 276
               

               Conread position:
               16-399
               

               Cow position:
               chr3:53593040-53592649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 41
               

               Conread position:
               16-399
               

               Cow position:
               chr3:59865307-59865691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               99, 275
               

               Conread position:
               16-399
               

               Cow position:
               chr3:68146165-68145803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               16-399
               

               Cow position:
               chr3:73211643-73212030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               93, 276
               

               Conread position:
               16-402
               

               Cow position:
               chr3:19708438-19708065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 36
               

               Conread position:
               16-408
               

               Cow position:
               chr3:25690452-25690842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 29
               

               Conread position:
               16-408
               

               Cow position:
               chr3:60933091-60933466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               274
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               165, 38
               

               Conread position:
               16-408
               

               Cow position:
               chr3:75727930-75727533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 283
               

               Conread position:
               16-413
               

               Cow position:
               chr3:66610179-66609790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 154
               

               Conread position:
               16-419
               

               Cow position:
               chr3:57577359-57577757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 14
               

               Conread position:
               16-422
               

               Cow position:
               chr3:50069438-50069826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               274
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               51, 67
               

               Conread position:
               16-426
               

               Cow position:
               chr3:56697598-56698013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               101, 271
               

               Conread position:
               16-427
               

               Cow position:
               chr3:34556562-34556172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               259, 88
               

               Conread position:
               16-427
               

               Cow position:
               chr3:80468992-80468610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               283
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               60, 81
               

               Conread position:
               16-432
               

               Cow position:
               chr3:19711656-19711267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               290
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               97, 121
               

               Conread position:
               16-433
               

               Cow position:
               chr3:59630841-59630439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 173
               

               Conread position:
               16-433
               

               Cow position:
               chr3:72131642-72131224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 45
               

               Conread position:
               16-434
               

               Cow position:
               chr3:49218648-49218228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 120
               

               Conread position:
               16-434
               

               Cow position:
               chr3:71231065-71231470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 133
               

               Conread position:
               16-434
               

               Cow position:
               chr3:80053875-80053468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 139
               

               Conread position:
               16-437
               

               Cow position:
               chr3:12675370-12674965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 29
               

               Conread position:
               16-440
               

               Cow position:
               chr3:35852810-35852390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 198
               

               Conread position:
               16-446
               

               Cow position:
               chr3:59473775-59474209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 69
               

               Conread position:
               16-447
               

               Cow position:
               chr3:48241280-48241702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 178
               

               Conread position:
               16-447
               

               Cow position:
               chr3:49650040-49650476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 14
               

               Conread position:
               16-448
               

               Cow position:
               chr3:2393313-2392879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 182
               

               Conread position:
               16-448
               

               Cow position:
               chr3:17222492-17222051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 155
               

               Conread position:
               16-448
               

               Cow position:
               chr3:45184182-45183743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               298
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               95, 26
               

               Conread position:
               16-448
               

               Cow position:
               chr3:55010492-55010076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 5
               

               Conread position:
               16-448
               

               Cow position:
               chr3:59588178-59588599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               288
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               95, 245
               

               Conread position:
               16-448
               

               Cow position:
               chr3:65236678-65237113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 145
               

               Conread position:
               16-448
               

               Cow position:
               chr3:80071776-80072218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 215
               

               Conread position:
               16-449
               

               Cow position:
               chr3:209981-210409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 154
               

               Conread position:
               16-449
               

               Cow position:
               chr3:12712264-12711825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 294
               

               Conread position:
               16-449
               

               Cow position:
               chr3:14263054-14263482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 51
               

               Conread position:
               16-449
               

               Cow position:
               chr3:14466045-14465617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 118
               

               Conread position:
               16-449
               

               Cow position:
               chr3:26219402-26218963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 216
               

               Conread position:
               16-449
               

               Cow position:
               chr3:45881568-45881988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 205
               

               Conread position:
               16-449
               

               Cow position:
               chr3:56582506-56582933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               101, 14
               

               Conread position:
               16-449
               

               Cow position:
               chr3:61225075-61224652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               16-450
               

               Cow position:
               chr3:80581335-80581746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               16-451
               

               Cow position:
               chr3:66708413-66707975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 33
               

               Conread position:
               16-451
               

               Cow position:
               chr3:74233869-74234278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 44
               

               Conread position:
               16-451
               

               Cow position:
               chr3:79884827-79884396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 281
               

               Conread position:
               16-455
               

               Cow position:
               chr3:14626491-14626054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               322, 150
               

               Conread position:
               16-455
               

               Cow position:
               chr3:18066793-18067228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 207
               

               Conread position:
               16-473
               

               Cow position:
               chr3:33327353-33327823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 107
               

               Conread position:
               16-473
               

               Cow position:
               chr3:58286236-58285795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 51
               

               Conread position:
               16-477
               

               Cow position:
               chr3:12255139-12255595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 127
               

               Conread position:
               16-477
               

               Cow position:
               chr3:26554055-26553603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 101
               

               Conread position:
               16-485
               

               Cow position:
               chr3:46094488-46094947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 167
               

               Conread position:
               16-486
               

               Cow position:
               chr3:34086399-34085929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               100, 54
               

               Conread position:
               16-489
               

               Cow position:
               chr3:15655485-15655016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 54
               

               Conread position:
               16-491
               

               Cow position:
               chr3:51147006-51146540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 45
               

               Conread position:
               16-497
               

               Cow position:
               chr3:53588733-53588247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 145
               

               Conread position:
               16-499
               

               Cow position:
               chr3:4049862-4050339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 103
               

               Conread position:
               16-505
               

               Cow position:
               chr3:83490737-83491244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 10
               

               Conread position:
               16-506
               

               Cow position:
               chr3:48252555-48253044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 98
               

               Conread position:
               16-506
               

               Cow position:
               chr3:50614304-50614788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 72
               

               Conread position:
               16-508
               

               Cow position:
               chr3:5365344-5365832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 140
               

               Conread position:
               16-508
               

               Cow position:
               chr3:13577538-13577052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 216
               

               Conread position:
               16-508
               

               Cow position:
               chr3:20471707-20471218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 158
               

               Conread position:
               16-508
               

               Cow position:
               chr3:28908544-28908049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 137
               

               Conread position:
               16-508
               

               Cow position:
               chr3:29887765-29887273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 153
               

               Conread position:
               16-508
               

               Cow position:
               chr3:37186500-37186975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               333, 41
               

               Conread position:
               16-508
               

               Cow position:
               chr3:60597213-60597704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               509
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               332, 11
               

               Conread position:
               16-508
               

               Cow position:
               chr3:69751042-69750568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 151
               

               Conread position:
               16-508
               

               Cow position:
               chr3:80818395-80818849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 47
               

               Conread position:
               17-351
               

               Cow position:
               chr3:2903638-2903303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               81, 212
               

               Conread position:
               17-425
               

               Cow position:
               chr3:49461277-49460860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 289
               

               Conread position:
               17-426
               

               Cow position:
               chr3:53384623-53384213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 146
               

               Conread position:
               17-427
               

               Cow position:
               chr3:20438001-20437588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 161
               

               Conread position:
               17-432
               

               Cow position:
               chr3:72390743-72391154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 74
               

               Conread position:
               17-434
               

               Cow position:
               chr3:5101100-5100697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 156
               

               Conread position:
               17-434
               

               Cow position:
               chr3:61839951-61840350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 56
               

               Conread position:
               17-438
               

               Cow position:
               chr3:58350238-58350651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               296
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               62, 108
               

               Conread position:
               17-443
               

               Cow position:
               chr3:64011156-64010731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 52
               

               Conread position:
               17-447
               

               Cow position:
               chr3:49382612-49383037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 173
               

               Conread position:
               17-447
               

               Cow position:
               chr3:77271618-77271190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               17-447
               

               Cow position:
               chr3:83816141-83815700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               290
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               59, 206
               

               Conread position:
               17-448
               

               Cow position:
               chr3:80564621-80565055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 20
               

               Conread position:
               17-449
               

               Cow position:
               chr3:9663527-9663082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 256
               

               Conread position:
               17-449
               

               Cow position:
               chr3:11986991-11987419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 48
               

               Conread position:
               17-449
               

               Cow position:
               chr3:53149986-53150421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 191
               

               Conread position:
               17-449
               

               Cow position:
               chr3:71497486-71497048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 180
               

               Conread position:
               17-451
               

               Cow position:
               chr3:58766952-58767355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               332, 37
               

               Conread position:
               17-455
               

               Cow position:
               chr3:1830905-1830480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 117
               

               Conread position:
               17-506
               

               Cow position:
               chr3:54434633-54435133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 44
               

               Conread position:
               17-508
               

               Cow position:
               chr3:18459860-18459370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 176
               

               Conread position:
               17-508
               

               Cow position:
               chr3:24352549-24353007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 42
               

               Conread position:
               17-508
               

               Cow position:
               chr3:26903777-26904266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 56
               

               Conread position:
               17-508
               

               Cow position:
               chr3:68586701-68587186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 44
               

               Conread position:
               18-288
               

               Cow position:
               chr3:27285890-27286164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               91, 27
               

               Conread position:
               18-300
               

               Cow position:
               chr3:44535099-44534816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               61, 72
               

               Conread position:
               18-307
               

               Cow position:
               chr3:15662037-15661747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 36
               

               Conread position:
               18-391
               

               Cow position:
               chr3:80082156-80081783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 169
               

               Conread position:
               18-393
               

               Cow position:
               chr3:56637320-56637698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               40, 226
               

               Conread position:
               18-412
               

               Cow position:
               chr3:31047281-31046899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               327, 91
               

               Conread position:
               18-427
               

               Cow position:
               chr3:52148015-52147583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               293
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               153, 90
               

               Conread position:
               18-434
               

               Cow position:
               chr3:49327607-49328019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 62
               

               Conread position:
               18-434
               

               Cow position:
               chr3:79292496-79292903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 50
               

               Conread position:
               18-448
               

               Cow position:
               chr3:37599755-37599339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 183
               

               Conread position:
               18-449
               

               Cow position:
               chr3:7566755-7566327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 36
               

               Conread position:
               18-449
               

               Cow position:
               chr3:14552540-14552965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 20
               

               Conread position:
               18-449
               

               Cow position:
               chr3:59451256-59451694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 14
               

               Conread position:
               18-449
               

               Cow position:
               chr3:61323015-61323421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               91, 63
               

               Conread position:
               18-449
               

               Cow position:
               chr3:73708720-73709136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               330, 43
               

               Conread position:
               18-449
               

               Cow position:
               chr3:81471436-81471006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 49
               

               Conread position:
               18-506
               

               Cow position:
               chr3:64536881-64536423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 122
               

               Conread position:
               19-443
               

               Cow position:
               chr3:72675749-72676175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 213
               

               Conread position:
               19-508
               

               Cow position:
               chr3:42584194-42584686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               509
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 192
               

               Conread position:
               21-330
               

               Cow position:
               chr3:19717426-19717119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               46, 177
               

               Conread position:
               21-432
               

               Cow position:
               chr3:42489652-42489228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               277
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               51, 94
               

               Conread position:
               21-496
               

               Cow position:
               chr3:34270598-34271054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 40
               

               Conread position:
               22-408
               

               Cow position:
               chr3:67929601-67929211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 107
               

               Conread position:
               22-434
               

               Cow position:
               chr3:26920560-26920985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 255
               

               Conread position:
               22-447
               

               Cow position:
               chr3:65058367-65058786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 116
               

               Conread position:
               22-449
               

               Cow position:
               chr3:59596870-59597268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               87, 27
               

               Conread position:
               22-508
               

               Cow position:
               chr3:54340751-54340274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 206
               

               Conread position:
               23-397
               

               Cow position:
               chr3:78076858-78077222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               88, 38
               

               Conread position:
               26-309
               

               Cow position:
               chr3:2630470-2630747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               85, 35
               

               Conread position:
               26-434
               

               Cow position:
               chr3:58969224-58968828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 83
               

               Conread position:
               26-443
               

               Cow position:
               chr3:59101504-59101911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 130
               

               Conread position:
               27-310
               

               Cow position:
               chr3:3164823-3164541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               82, 27
               

               Conread position:
               27-338
               

               Cow position:
               chr3:43658046-43657728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               41, 203
               

               Conread position:
               27-343
               

               Cow position:
               chr3:41367313-41366998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 76
               

               Conread position:
               27-369
               

               Cow position:
               chr3:42177830-42178166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 151
               

               Conread position:
               27-446
               

               Cow position:
               chr3:17935257-17934851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 132
               

               Conread position:
               29-426
               

               Cow position:
               chr3:58206779-58206382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               70, 97
               

               Conread position:
               29-441
               

               Cow position:
               chr3:27546162-27545737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 35
               

               Conread position:
               29-508
               

               Cow position:
               chr3:5420194-5419720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 201
               

               Conread position:
               30-403
               

               Cow position:
               chr3:83920874-83921228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               79, 31
               

               Conread position:
               30-448
               

               Cow position:
               chr3:55970180-55970595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 79
               

               Conread position:
               32-408
               

               Cow position:
               chr3:54903248-54903613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               267
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               142, 62
               

               Conread position:
               32-434
               

               Cow position:
               chr3:46900869-46901273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 194
               

               Conread position:
               33-346
               

               Cow position:
               chr3:59271235-59271528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               34-434
               

               Cow position:
               chr3:2024861-2025273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 146
               

               Conread position:
               35-372
               

               Cow position:
               chr3:42358992-42359327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               82, 227
               

               Conread position:
               35-432
               

               Cow position:
               chr3:28898550-28898151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 74
               

               Conread position:
               35-508
               

               Cow position:
               chr3:77224792-77225260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 165
               

               Conread position:
               37-449
               

               Cow position:
               chr3:67704216-67704636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 190
               

               Conread position:
               40-433
               

               Cow position:
               chr3:66292490-66292102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 11
               

               Conread position:
               40-456
               

               Cow position:
               chr3:53112851-53113272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 187
               

               Conread position:
               42-448
               

               Cow position:
               chr3:37041114-37041508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 70
               

               Conread position:
               42-469
               

               Cow position:
               chr3:65968840-65969275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 429
               

               Conread position:
               45-449
               

               Cow position:
               chr3:53270513-53270920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 262
               

               Conread position:
               47-452
               

               Cow position:
               chr3:82460873-82461272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 107
               

               Conread position:
               48-370
               

               Cow position:
               chr3:65800286-65800602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 62
               

               Conread position:
               54-434
               

               Cow position:
               chr3:2518840-2518464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               63, 248
               

               Conread position:
               54-449
               

               Cow position:
               chr3:53909811-53910198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               53, 35
               

               Conread position:
               54-449
               

               Cow position:
               chr3:70401600-70401986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 49
               

               Conread position:
               56-408
               

               Cow position:
               chr3:72473606-72473964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               59, 251
               

               Conread position:
               57-346
               

               Cow position:
               chr3:24305205-24304930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 74
               

               Conread position:
               57-383
               

               Cow position:
               chr3:54959891-54960211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               51, 129
               

               Conread position:
               57-473
               

               Cow position:
               chr3:45647835-45648245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 129
               

               Conread position:
               57-507
               

               Cow position:
               chr3:30463466-30463010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               314
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               52, 170
               

               Conread position:
               57-508
               

               Cow position:
               chr3:29507295-29507730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 165
               

               Conread position:
               60-443
               

               Cow position:
               chr3:4031670-4032047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 6
               

               Conread position:
               60-507
               

               Cow position:
               chr3:64172149-64172588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 6
               

               Conread position:
               65-302
               

               Cow position:
               chr3:25691457-25691700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               44, 134
               

               Conread position:
               65-422
               

               Cow position:
               chr3:78530244-78530605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 134
               

               Conread position:
               65-482
               

               Cow position:
               chr3:36100536-36100957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 265
               

               Conread position:
               65-485
               

               Cow position:
               chr3:48629878-48629463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 110
               

               Conread position:
               65-491
               

               Cow position:
               chr3:27532954-27532523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 161
               

               Conread position:
               65-506
               

               Cow position:
               chr3:8752507-8752931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               298
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               177, 29
               

               Conread position:
               65-508
               

               Cow position:
               chr3:41718099-41718538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 40
               

               Conread position:
               65-508
               

               Cow position:
               chr3:74533056-74533501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 160
               

               Conread position:
               66-284
               

               Cow position:
               chr3:18854802-18855023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               43, 97
               

               Conread position:
               66-288
               

               Cow position:
               chr3:48433653-48433882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 184
               

               Conread position:
               66-356
               

               Cow position:
               chr3:44623188-44622890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               120, 95
               

               Conread position:
               66-422
               

               Cow position:
               chr3:73759810-73759454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 66
               

               Conread position:
               66-432
               

               Cow position:
               chr3:71430498-71430132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 25
               

               Conread position:
               66-433
               

               Cow position:
               chr3:53739482-53739111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 160
               

               Conread position:
               66-448
               

               Cow position:
               chr3:14602004-14601615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 86
               

               Conread position:
               66-449
               

               Cow position:
               chr3:33253171-33252799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               263
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               66-449
               

               Cow position:
               chr3:56059516-56059901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 97
               

               Conread position:
               66-487
               

               Cow position:
               chr3:8393648-8394066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 130
               

               Conread position:
               66-508
               

               Cow position:
               chr3:58174620-58175048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               304
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               43, 65
               

               Conread position:
               67-508
               

               Cow position:
               chr3:31933392-31932957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               43, 108
               

               Conread position:
               67-508
               

               Cow position:
               chr3:64281226-64280771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 158
               

               Conread position:
               68-432
               

               Cow position:
               chr3:51598095-51598444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               46, 102
               

               Conread position:
               68-434
               

               Cow position:
               chr3:80740287-80740637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               68-471
               

               Cow position:
               chr3:63147433-63147040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               41, 106
               

               Conread position:
               69-448
               

               Cow position:
               chr3:73467331-73467724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               45, 75
               

               Conread position:
               69-449
               

               Cow position:
               chr3:23408630-23408268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               270
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               45, 36
               

               Conread position:
               70-508
               

               Cow position:
               chr3:23111791-23111366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 157
               

               Conread position:
               70-508
               

               Cow position:
               chr3:29812957-29813393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 35
               

               Conread position:
               70-508
               

               Cow position:
               chr3:42480337-42480762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 28
               

               Conread position:
               71-314
               

               Cow position:
               chr3:81401586-81401348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               90, 23
               

               Conread position:
               71-340
               

               Cow position:
               chr3:32869863-32870130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               31, 103
               

               Conread position:
               71-372
               

               Cow position:
               chr3:59333489-59333783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               106, 33
               

               Conread position:
               71-408
               

               Cow position:
               chr3:74699681-74699334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               71-422
               

               Cow position:
               chr3:63203159-63203496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               38, 116
               

               Conread position:
               71-432
               

               Cow position:
               chr3:76387898-76387535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               40, 164
               

               Conread position:
               71-434
               

               Cow position:
               chr3:56655-56302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 116
               

               Conread position:
               71-434
               

               Cow position:
               chr3:5096917-5097282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 109
               

               Conread position:
               71-439
               

               Cow position:
               chr3:37451783-37452148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 78
               

               Conread position:
               71-449
               

               Cow position:
               chr3:63179582-63179944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               38, 103
               

               Conread position:
               71-451
               

               Cow position:
               chr3:54740157-54739795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               40, 102
               

               Conread position:
               71-452
               

               Cow position:
               chr3:78946125-78945746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 64
               

               Conread position:
               71-477
               

               Cow position:
               chr3:58540816-58540402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 39
               

               Conread position:
               71-503
               

               Cow position:
               chr3:82075334-82074920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 83
               

               Conread position:
               71-504
               

               Cow position:
               chr3:54862710-54862278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 241
               

               Conread position:
               71-506
               

               Cow position:
               chr3:17957181-17957626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               303
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               40, 52
               

               Conread position:
               71-508
               

               Cow position:
               chr3:13330058-13329626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 116
               

               Conread position:
               71-508
               

               Cow position:
               chr3:15229105-15228674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 151
               

               Conread position:
               71-508
               

               Cow position:
               chr3:23471754-23471296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 190
               

               Conread position:
               71-508
               

               Cow position:
               chr3:58130714-58131139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               301
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               38, 154
               

               Conread position:
               71-508
               

               Cow position:
               chr3:67744914-67744474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 156
               

               Conread position:
               72-411
               

               Cow position:
               chr3:49140332-49139997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               250
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               92, 37
               

               Conread position:
               72-447
               

               Cow position:
               chr3:29596106-29596477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               264
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               16, 119
               

               Conread position:
               72-449
               

               Cow position:
               chr3:21081670-21081296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 48
               

               Conread position:
               72-507
               

               Cow position:
               chr3:68881394-68880965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               299
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               102, 35
               

               Conread position:
               73-447
               

               Cow position:
               chr3:59205957-59206325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               34, 151
               

               Conread position:
               73-449
               

               Cow position:
               chr3:61278622-61278998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 233
               

               Conread position:
               73-481
               

               Cow position:
               chr3:8457373-8457776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               73-508
               

               Cow position:
               chr3:73764477-73764048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 36
               

               Conread position:
               74-435
               

               Cow position:
               chr3:39171767-39171410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 149
               

               Conread position:
               74-486
               

               Cow position:
               chr3:62292399-62292000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               282
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               35, 50
               

               Conread position:
               74-507
               

               Cow position:
               chr3:3985047-3985482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 114
               

               Conread position:
               76-369
               

               Cow position:
               chr3:75057395-75057121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               268, 34
               

               Conread position:
               76-447
               

               Cow position:
               chr3:38691686-38691318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 118
               

               Conread position:
               76-448
               

               Cow position:
               chr3:49482985-49482627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               140, 28
               

               Conread position:
               77-305
               

               Cow position:
               chr3:66116392-66116162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               32, 145
               

               Conread position:
               77-364
               

               Cow position:
               chr3:22170909-22171195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               32, 108
               

               Conread position:
               77-405
               

               Cow position:
               chr3:17456549-17456222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               32, 171
               

               Conread position:
               77-414
               

               Cow position:
               chr3:81277984-81277637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 149
               

               Conread position:
               77-432
               

               Cow position:
               chr3:75158085-75158428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               250
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               77-435
               

               Cow position:
               chr3:55124558-55124204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 155
               

               Conread position:
               77-448
               

               Cow position:
               chr3:57763943-57764306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 148
               

               Conread position:
               77-449
               

               Cow position:
               chr3:53046937-53046573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 116
               

               Conread position:
               77-449
               

               Cow position:
               chr3:66901022-66900643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 197
               

               Conread position:
               77-451
               

               Cow position:
               chr3:77365574-77365198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 77
               

               Conread position:
               77-508
               

               Cow position:
               chr3:26065721-26066154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 120
               

               Conread position:
               77-508
               

               Cow position:
               chr3:62883922-62884345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 83
               

               Conread position:
               77-508
               

               Cow position:
               chr3:76138209-76138626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               287
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               34, 89
               

               Conread position:
               78-346
               

               Cow position:
               chr3:49731916-49731654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               33, 109
               

               Conread position:
               78-469
               

               Cow position:
               chr3:44101702-44102076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               279
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               79-463
               

               Cow position:
               chr3:68627953-68627587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               268
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               30, 87
               

               Conread position:
               79-508
               

               Cow position:
               chr3:29360413-29359997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               81-379
               

               Cow position:
               chr3:74499948-74500262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               81-508
               

               Cow position:
               chr3:23944821-23945267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 142
               

               Conread position:
               82-508
               

               Cow position:
               chr3:15052212-15051785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 27
               

               Conread position:
               83-449
               

               Cow position:
               chr3:75046144-75045786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               261, 69
               

               Conread position:
               87-449
               

               Cow position:
               chr3:43571472-43571836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               261, 160
               

               Conread position:
               89-364
               

               Cow position:
               chr3:84000344-84000617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               20, 207
               

               Conread position:
               89-386
               

               Cow position:
               chr3:52650797-52650501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               89-412
               

               Cow position:
               chr3:14633254-14632930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 76
               

               Conread position:
               89-447
               

               Cow position:
               chr3:51578589-51578238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               20, 135
               

               Conread position:
               89-449
               

               Cow position:
               chr3:13302124-13301761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               20, 101
               

               Conread position:
               89-508
               

               Cow position:
               chr3:8923777-8924189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               89-508
               

               Cow position:
               chr3:74611294-74611712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 135
               

               Conread position:
               90-434
               

               Cow position:
               chr3:83455419-83455077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 133
               

               Conread position:
               91-452
               

               Cow position:
               chr3:14801489-14801837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               236, 17
               

               Conread position:
               92-449
               

               Cow position:
               chr3:73394851-73395206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 208
               

               Conread position:
               93-433
               

               Cow position:
               chr3:26970565-26970887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               93-505
               

               Cow position:
               chr3:54881495-54881920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               94-506
               

               Cow position:
               chr3:23092242-23091832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 14
               

               Conread position:
               95-323
               

               Cow position:
               chr3:45307673-45307898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 129
               

               Conread position:
               95-434
               

               Cow position:
               chr3:75050880-75050544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               95-508
               

               Cow position:
               chr3:51234358-51233937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 84
               

               Conread position:
               96-284
               

               Cow position:
               chr3:55970964-55971154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               6, 96
               

               Conread position:
               96-349
               

               Cow position:
               chr3:73590259-73590005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               13, 27
               

               Conread position:
               96-358
               

               Cow position:
               chr3:28692690-28692431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               15, 69
               

               Conread position:
               96-449
               

               Cow position:
               chr3:2680251-2680603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 201
               

               Conread position:
               96-449
               

               Cow position:
               chr3:75080505-75080850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               97-449
               

               Cow position:
               chr3:73460720-73461056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               252, 75
               

               Conread position:
               98-382
               

               Cow position:
               chr3:14625647-14625368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               99-343
               

               Cow position:
               chr3:4087424-4087177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               10, 94
               

               Conread position:
               99-397
               

               Cow position:
               chr3:22820312-22820608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               100-449
               

               Cow position:
               chr3:57624211-57624554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               101-448
               

               Cow position:
               chr3:71135533-71135875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 124
               

               Conread position:
               110-289
               

               Cow position:
               chr3:23269857-23270031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               110-378
               

               Cow position:
               chr3:41328210-41328459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               110-397
               

               Cow position:
               chr3:63332565-63332855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               64, 138
               

               Conread position:
               110-430
               

               Cow position:
               chr3:23445135-23444817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 59
               

               Conread position:
               110-448
               

               Cow position:
               chr3:15752873-15752547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               288, 51
               

               Conread position:
               110-448
               

               Cow position:
               chr3:52652319-52651991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 73
               

               Conread position:
               113-266
               

               Cow position:
               chr3:12563236-12563388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               113-508
               

               Cow position:
               chr3:18686674-18687068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 40
               

               Conread position:
               114-307
               

               Cow position:
               chr3:8604255-8604064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               114-508
               

               Cow position:
               chr3:55992112-55991721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 90
               

               Conread position:
               115-363
               

               Cow position:
               chr3:16362978-16362732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 86
               

               Conread position:
               115-432
               

               Cow position:
               chr3:70334941-70334622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               104, 14
               

               Conread position:
               117-415
               

               Cow position:
               chr3:34937602-34937900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               57, 111
               

               Conread position:
               118-452
               

               Cow position:
               chr3:27940365-27940050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               194, 101
               

               Conread position:
               118-508
               

               Cow position:
               chr3:18725872-18725496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 104
               

               Conread position:
               119-508
               

               Cow position:
               chr3:18217002-18216628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               276
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               57, 80
               

               Conread position:
               120-399
               

               Cow position:
               chr3:188624-188911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               77, 60
               

               Conread position:
               120-448
               

               Cow position:
               chr3:11711718-11712044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               121-449
               

               Cow position:
               chr3:59621871-59621558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               227, 24
               

               Conread position:
               122-383
               

               Cow position:
               chr3:55106676-55106416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               50, 173
               

               Conread position:
               124-447
               

               Cow position:
               chr3:78092740-78092424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               50, 7
               

               Conread position:
               125-508
               

               Cow position:
               chr3:55373805-55373418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               269
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               62, 100
               

               Conread position:
               126-432
               

               Cow position:
               chr3:27697208-27696907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               126-508
               

               Cow position:
               chr3:34669961-34669596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               129-320
               

               Cow position:
               chr3:78739633-78739820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 59
               

               Conread position:
               129-449
               

               Cow position:
               chr3:26960821-26960498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               45, 168
               

               Conread position:
               132-359
               

               Cow position:
               chr3:47524732-47524507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 90
               

               Conread position:
               132-505
               

               Cow position:
               chr3:3736064-3736445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 13
               

               Conread position:
               133-449
               

               Cow position:
               chr3:83215031-83215352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               83, 173
               

               Conread position:
               133-508
               

               Cow position:
               chr3:2198660-2199031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 87
               

               Conread position:
               134-449
               

               Cow position:
               chr3:74134484-74134794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 85
               

               Conread position:
               135-317
               

               Cow position:
               chr3:63038916-63039090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               135-449
               

               Cow position:
               chr3:45211075-45211391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               39, 98
               

               Conread position:
               136-448
               

               Cow position:
               chr3:5366553-5366857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               137-397
               

               Cow position:
               chr3:67698061-67698313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               139-429
               

               Cow position:
               chr3:76713538-76713257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               140-397
               

               Cow position:
               chr3:25944862-25945130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               40, 191
               

               Conread position:
               140-448
               

               Cow position:
               chr3:23105581-23105273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               209, 79
               

               Conread position:
               140-505
               

               Cow position:
               chr3:26739637-26739260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               33, 155
               

               Conread position:
               141-303
               

               Cow position:
               chr3:10173349-10173186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               33, 83
               

               Conread position:
               141-346
               

               Cow position:
               chr3:3062348-3062553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 45
               

               Conread position:
               141-412
               

               Cow position:
               chr3:74878804-74878536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               74, 50
               

               Conread position:
               141-420
               

               Cow position:
               chr3:15976954-15977242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               102, 79
               

               Conread position:
               141-504
               

               Cow position:
               chr3:61009648-61009297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               45, 13
               

               Conread position:
               144-439
               

               Cow position:
               chr3:4319499-4319791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               36, 101
               

               Conread position:
               146-468
               

               Cow position:
               chr3:36375752-36375430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               76, 15
               

               Conread position:
               146-507
               

               Cow position:
               chr3:55712221-55712597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 15
               

               Conread position:
               147-408
               

               Cow position:
               chr3:34741657-34741920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               20, 86
               

               Conread position:
               147-419
               

               Cow position:
               chr3:55777825-55778096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               26, 77
               

               Conread position:
               147-506
               

               Cow position:
               chr3:49132258-49131916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               24, 77
               

               Conread position:
               148-361
               

               Cow position:
               chr3:15859873-15859665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               200, 13
               

               Conread position:
               148-435
               

               Cow position:
               chr3:10896621-10896898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               24, 76
               

               Conread position:
               150-433
               

               Cow position:
               chr3:7940761-7940483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               195, 69
               

               Conread position:
               153-395
               

               Cow position:
               chr3:53095142-53094896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 149
               

               Conread position:
               154-504
               

               Cow position:
               chr3:74206011-74205664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               240
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               174, 66
               

               Conread position:
               157-449
               

               Cow position:
               chr3:57760300-57760588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               191, 142
               

               Conread position:
               157-480
               

               Cow position:
               chr3:50347772-50348074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               86, 15
               

               Conread position:
               159-402
               

               Cow position:
               chr3:46226255-46226498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               159-507
               

               Cow position:
               chr3:61894370-61894017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 102
               

               Conread position:
               159-507
               

               Cow position:
               chr3:67520372-67520010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               68, 32
               

               Conread position:
               161-330
               

               Cow position:
               chr3:12576498-12576328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 37
               

               Conread position:
               161-390
               

               Cow position:
               chr3:70631824-70632051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               142, 58
               

               Conread position:
               161-432
               

               Cow position:
               chr3:66884135-66883872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               184, 128
               

               Conread position:
               161-432
               

               Cow position:
               chr3:78896455-78896720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               187, 43
               

               Conread position:
               161-434
               

               Cow position:
               chr3:15751917-15751638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 192
               

               Conread position:
               161-435
               

               Cow position:
               chr3:3637992-3638254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               234, 138
               

               Conread position:
               161-451
               

               Cow position:
               chr3:55319097-55318807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               52, 60
               

               Conread position:
               161-508
               

               Cow position:
               chr3:57634079-57634413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               153, 88
               

               Conread position:
               162-448
               

               Cow position:
               chr3:63269032-63269311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               186, 45
               

               Conread position:
               164-452
               

               Cow position:
               chr3:54506520-54506800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               186, 14
               

               Conread position:
               165-343
               

               Cow position:
               chr3:27212172-27212346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               165-448
               

               Cow position:
               chr3:67930372-67930097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 53
               

               Conread position:
               165-449
               

               Cow position:
               chr3:46006217-46005932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               129, 152
               

               Conread position:
               166-439
               

               Cow position:
               chr3:53091311-53091567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               183, 53
               

               Conread position:
               166-507
               

               Cow position:
               chr3:55819558-55819915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               249
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               168-427
               

               Cow position:
               chr3:26981877-26982126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               54, 118
               

               Conread position:
               168-434
               

               Cow position:
               chr3:74502509-74502250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               54, 117
               

               Conread position:
               168-508
               

               Cow position:
               chr3:76922850-76922506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               228, 51
               

               Conread position:
               171-494
               

               Cow position:
               chr3:35278386-35278705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               83, 199
               

               Conread position:
               172-369
               

               Cow position:
               chr3:23037810-23037611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               172-434
               

               Cow position:
               chr3:74079822-74079562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               173, 47
               

               Conread position:
               172-447
               

               Cow position:
               chr3:84597143-84596877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               170, 48
               

               Conread position:
               172-449
               

               Cow position:
               chr3:14598767-14599026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               225, 77
               

               Conread position:
               172-449
               

               Cow position:
               chr3:54374044-54373770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               23, 122
               

               Conread position:
               172-449
               

               Cow position:
               chr3:75853514-75853239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 48
               

               Conread position:
               172-457
               

               Cow position:
               chr3:53318220-53318498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               176, 121
               

               Conread position:
               173-506
               

               Cow position:
               chr3:61322666-61322983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               172, 20
               

               Conread position:
               174-315
               

               Cow position:
               chr3:16891117-16891258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               128, 61
               

               Conread position:
               174-504
               

               Cow position:
               chr3:35153440-35153769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               239
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               174, 51
               

               Conread position:
               176-418
               

               Cow position:
               chr3:81359292-81359048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               39, 111
               

               Conread position:
               176-502
               

               Cow position:
               chr3:11920210-11919896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               140, 43
               

               Conread position:
               178-434
               

               Cow position:
               chr3:55109792-55109538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               171, 22
               

               Conread position:
               178-434
               

               Cow position:
               chr3:62046485-62046739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               167, 41
               

               Conread position:
               179-449
               

               Cow position:
               chr3:19792716-19792995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               115, 236
               

               Conread position:
               180-412
               

               Cow position:
               chr3:18144292-18144065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               148, 39
               

               Conread position:
               186-434
               

               Cow position:
               chr3:73820541-73820294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               19, 86
               

               Conread position:
               186-447
               

               Cow position:
               chr3:12978785-12978529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               159, 5
               

               Conread position:
               187-450
               

               Cow position:
               chr3:30222017-30222282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               38, 127
               

               Conread position:
               190-508
               

               Cow position:
               chr3:58765242-58764919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               192-389
               

               Cow position:
               chr3:15992551-15992747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               157, 26
               

               Conread position:
               192-448
               

               Cow position:
               chr3:48810800-48810556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               157, 28
               

               Conread position:
               192-448
               

               Cow position:
               chr3:54100886-54100637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 105
               

               Conread position:
               192-449
               

               Cow position:
               chr3:23920593-23920339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               156, 98
               

               Conread position:
               192-449
               

               Cow position:
               chr3:59884236-59883979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               127, 107
               

               Conread position:
               192-508
               

               Cow position:
               chr3:4036240-4035941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               192-508
               

               Cow position:
               chr3:24872552-24872859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               203, 28
               

               Conread position:
               194-507
               

               Cow position:
               chr3:15153531-15153854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               155, 26
               

               Conread position:
               195-395
               

               Cow position:
               chr3:2851055-2850863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               195-508
               

               Cow position:
               chr3:73742015-73741721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               154, 25
               

               Conread position:
               196-447
               

               Cow position:
               chr3:79645603-79645342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               26, 105
               

               Conread position:
               196-508
               

               Cow position:
               chr3:58973144-58973443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 24
               

               Conread position:
               197-448
               

               Cow position:
               chr3:77581950-77582195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               200, 95
               

               Conread position:
               198-424
               

               Cow position:
               chr3:34871411-34871630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               150, 15
               

               Conread position:
               198-449
               

               Cow position:
               chr3:76268139-76267885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               31, 111
               

               Conread position:
               199-343
               

               Cow position:
               chr3:27247346-27247207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               200-434
               

               Cow position:
               chr3:24935215-24935440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               148, 18
               

               Conread position:
               201-427
               

               Cow position:
               chr3:19793747-19793523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               16, 85
               

               Conread position:
               201-449
               

               Cow position:
               chr3:45667507-45667255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 97
               

               Conread position:
               202-507
               

               Cow position:
               chr3:46541981-46541685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               147, 17
               

               Conread position:
               203-507
               

               Cow position:
               chr3:70334117-70333803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               130, 99
               

               Conread position:
               203-508
               

               Cow position:
               chr3:51492629-51492932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               40, 21
               

               Conread position:
               203-508
               

               Cow position:
               chr3:55177905-55177584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               206-434
               

               Cow position:
               chr3:79196610-79196834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               143, 13
               

               Conread position:
               206-508
               

               Cow position:
               chr3:22221170-22221493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               96, 34
               

               Conread position:
               209-505
               

               Cow position:
               chr3:58527244-58527541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               27, 92
               

               Conread position:
               210-395
               

               Cow position:
               chr3:43726931-43727114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               138, 33
               

               Conread position:
               212-448
               

               Cow position:
               chr3:1785385-1785156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               136, 7
               

               Conread position:
               213-448
               

               Cow position:
               chr3:35621159-35621390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               184, 81
               

               Conread position:
               214-426
               

               Cow position:
               chr3:1517656-1517445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               37, 69
               

               Conread position:
               214-442
               

               Cow position:
               chr3:71238331-71238553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 80
               

               Conread position:
               214-447
               

               Cow position:
               chr3:21015104-21014868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 78
               

               Conread position:
               216-448
               

               Cow position:
               chr3:36671919-36671684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 85
               

               Conread position:
               219-449
               

               Cow position:
               chr3:17058679-17058456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 78
               

               Conread position:
               219-508
               

               Cow position:
               chr3:74846848-74846558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               220-449
               

               Cow position:
               chr3:56678489-56678260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               125, 10
               

               Conread position:
               220-505
               

               Cow position:
               chr3:61116994-61116707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 104
               

               Conread position:
               221-508
               

               Cow position:
               chr3:20993676-20993962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 57
               

               Conread position:
               222-507
               

               Cow position:
               chr3:3037065-3036775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 97
               

               Conread position:
               224-432
               

               Cow position:
               chr3:84175958-84175750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               124, 74
               

               Conread position:
               224-450
               

               Cow position:
               chr3:22509894-22510116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               124, 67
               

               Conread position:
               224-475
               

               Cow position:
               chr3:32457068-32457309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               124, 75
               

               Conread position:
               224-508
               

               Cow position:
               chr3:60389635-60389919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               121, 56
               

               Conread position:
               226-508
               

               Cow position:
               chr3:15221648-15221370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               90, 23
               

               Conread position:
               227-451
               

               Cow position:
               chr3:76155858-76156079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               171, 60
               

               Conread position:
               230-504
               

               Cow position:
               chr3:34675597-34675867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               119, 10
               

               Conread position:
               231-508
               

               Cow position:
               chr3:14506042-14505766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               13, 86
               

               Conread position:
               237-448
               

               Cow position:
               chr3:73298967-73299167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               112, 62
               

               Conread position:
               239-504
               

               Cow position:
               chr3:18214258-18213994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               110, 14
               

               Conread position:
               240-449
               

               Cow position:
               chr3:72504015-72503806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               26, 30
               

               Conread position:
               242-448
               

               Cow position:
               chr3:55094349-55094141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               31, 55
               

               Conread position:
               242-448
               

               Cow position:
               chr3:58318068-58317859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               242-508
               

               Cow position:
               chr3:3649332-3649072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               154, 56
               

               Conread position:
               243-449
               

               Cow position:
               chr3:15443843-15443639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               105, 59
               

               Conread position:
               243-450
               

               Cow position:
               chr3:17235323-17235126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               102, 56
               

               Conread position:
               243-508
               

               Cow position:
               chr3:58292007-58291744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 74
               

               Conread position:
               244-508
               

               Cow position:
               chr3:15951024-15950750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               245-421
               

               Cow position:
               chr3:12670726-12670553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               104, 9
               

               Conread position:
               245-449
               

               Cow position:
               chr3:60264828-60264626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               104, 9
               

               Conread position:
               248-449
               

               Cow position:
               chr3:83988423-83988622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 13
               

               Conread position:
               249-415
               

               Cow position:
               chr3:45897498-45897664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               96, 63
               

               Conread position:
               249-415
               

               Cow position:
               chr3:45972558-45972392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               96, 63
               

               Conread position:
               249-508
               

               Cow position:
               chr3:58448170-58447919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 53
               

               Conread position:
               250-447
               

               Cow position:
               chr3:33693711-33693907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               35, 58
               

               Conread position:
               250-448
               

               Cow position:
               chr3:27727936-27727742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               98, 27
               

               Conread position:
               250-449
               

               Cow position:
               chr3:55983988-55984188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               95, 140
               

               Conread position:
               250-449
               

               Cow position:
               chr3:65019972-65019777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               98, 52
               

               Conread position:
               251-434
               

               Cow position:
               chr3:3316918-3316741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               98, 42
               

               Conread position:
               253-448
               

               Cow position:
               chr3:28238675-28238483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               96, 68
               

               Conread position:
               253-449
               

               Cow position:
               chr3:75238354-75238547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               95, 46
               

               Conread position:
               255-469
               

               Cow position:
               chr3:35874069-35873863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               90, 51
               

               Conread position:
               256-508
               

               Cow position:
               chr3:3818694-3818931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               257-434
               

               Cow position:
               chr3:81277571-81277393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               257-448
               

               Cow position:
               chr3:84250643-84250455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               91, 11
               

               Conread position:
               258-508
               

               Cow position:
               chr3:56483415-56483668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               259-447
               

               Cow position:
               chr3:47753126-47753314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               259-504
               

               Cow position:
               chr3:39911154-39910915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               90, 42
               

               Conread position:
               261-502
               

               Cow position:
               chr3:26089099-26088854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 41
               

               Conread position:
               262-506
               

               Cow position:
               chr3:9074440-9074199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               56, 38
               

               Conread position:
               268-488
               

               Cow position:
               chr3:53704055-53703836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               60, 34
               

               Conread position:
               268-508
               

               Cow position:
               chr3:39873786-39873541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               271-449
               

               Cow position:
               chr3:74900724-74900553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               77, 27
               

               Conread position:
               274-507
               

               Cow position:
               chr3:48271248-48271473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 49
               

               Conread position:
               275-449
               

               Cow position:
               chr3:48478114-48477946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               275-506
               

               Cow position:
               chr3:73436524-73436294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               74, 38
               

               Conread position:
               275-508
               

               Cow position:
               chr3:41550459-41550227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               277-449
               

               Cow position:
               chr3:27976606-27976434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               71, 25
               

               Conread position:
               283-473
               

               Cow position:
               chr3:61215458-61215278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               285-486
               

               Cow position:
               chr3:61467264-61467063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               288-491
               

               Cow position:
               chr3:11715925-11716131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               56, 35
               

               Conread position:
               296-447
               

               Cow position:
               chr3:11292311-11292160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               298-449
               

               Cow position:
               chr3:81234325-81234479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               299-452
               

               Cow position:
               chr3:64373216-64373063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               300-508
               

               Cow position:
               chr3:20841934-20841712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               301-508
               

               Cow position:
               chr3:5601226-5601020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 151
               

               Conread position:
               302-434
               

               Cow position:
               chr3:36913991-36914125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               302-449
               

               Cow position:
               chr3:56704381-56704231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               303-508
               

               Cow position:
               chr3:40100775-40100562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               305-508
               

               Cow position:
               chr3:17634098-17633897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               306-443
               

               Cow position:
               chr3:11606259-11606404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               307-449
               

               Cow position:
               chr3:69650943-69650799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               308-448
               

               Cow position:
               chr3:21997841-21997699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               308-508
               

               Cow position:
               chr3:909685-909482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 12
               

               Conread position:
               308-508
               

               Cow position:
               chr3:1004593-1004783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               91, 15
               

               Conread position:
               311-452
               

               Cow position:
               chr3:21641938-21642080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               311-508
               

               Cow position:
               chr3:29828198-29828000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               38, 142
               

               Conread position:
               311-508
               

               Cow position:
               chr3:51349773-51349965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               38, 142
               

               Conread position:
               312-469
               

               Cow position:
               chr3:24300314-24300470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               313-508
               

               Cow position:
               chr3:63448967-63449150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               315-507
               

               Cow position:
               chr3:3698613-3698810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 87
               

               Conread position:
               316-506
               

               Cow position:
               chr3:25076210-25076020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               34, 7
               

               Conread position:
               321-506
               

               Cow position:
               chr3:10732850-10733043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               327-449
               

               Cow position:
               chr3:11705217-11705341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               328-508
               

               Cow position:
               chr3:57846963-57846784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               330-452
               

               Cow position:
               chr3:8814144-8814020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 114
               

               Conread position:
               333-508
               

               Cow position:
               chr3:54557648-54557833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 15
               

               Conread position:
               346-508
               

               Cow position:
               chr3:27246973-27246800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               346-508
               

               Cow position:
               chr3:50350983-50350811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               44, 94
               

               Conread position:
               347-508
               

               Cow position:
               chr3:6900902-6901063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               50, 109
               

               Conread position:
               349-508
               

               Cow position:
               chr3:44093379-44093216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 154
               

               Conread position:
               352-508
               

               Cow position:
               chr3:10173175-10173015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               355-508
               

               Cow position:
               chr3:68086114-68085966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               41, 0
               
Show alignments to all cow chromosomes.
Conread position:	10-399
Cow position:	chr3:78023626-78023235 (view UCSC Genome Browser custom track)
Alignm length:	396
Alignm identity:	251
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	99, 282
Conread position:	11-440
Cow position:	chr3:2506825-2506398 (view UCSC Genome Browser custom track)
Alignm length:	441
Alignm identity:	316
Alignm E-value:	0
Alignm gaps (pig, cow):	54, 71
Conread position:	12-311
Cow position:	chr3:38497599-38497898 (view UCSC Genome Browser custom track)
Alignm length:	309
Alignm identity:	219
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	63, 197
Conread position:	12-370
Cow position:	chr3:66649787-66649431 (view UCSC Genome Browser custom track)
Alignm length:	367
Alignm identity:	234
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	47, 56
Conread position:	12-399
Cow position:	chr3:35299329-35299707 (view UCSC Genome Browser custom track)
Alignm length:	391
Alignm identity:	274
Alignm E-value:	0
Alignm gaps (pig, cow):	102, 159
Conread position:	12-427
Cow position:	chr3:59798909-59799316 (view UCSC Genome Browser custom track)
Alignm length:	420
Alignm identity:	282
Alignm E-value:	0
Alignm gaps (pig, cow):	102, 175
Conread position:	12-433
Cow position:	chr3:15685255-15684848 (view UCSC Genome Browser custom track)
Alignm length:	426
Alignm identity:	309
Alignm E-value:	0
Alignm gaps (pig, cow):	162, 97
Conread position:	12-487
Cow position:	chr3:36204205-36204680 (view UCSC Genome Browser custom track)
Alignm length:	487
Alignm identity:	323
Alignm E-value:	0
Alignm gaps (pig, cow):	67, 138
Conread position:	12-508
Cow position:	chr3:37486133-37485653 (view UCSC Genome Browser custom track)
Alignm length:	512
Alignm identity:	365
Alignm E-value:	0
Alignm gaps (pig, cow):	47, 127
Conread position:	13-448
Cow position:	chr3:7678334-7678741 (view UCSC Genome Browser custom track)
Alignm length:	437
Alignm identity:	296
Alignm E-value:	5.60519e-45
Alignm gaps (pig, cow):	335, 15
Conread position:	14-439
Cow position:	chr3:4222976-4223379 (view UCSC Genome Browser custom track)
Alignm length:	431
Alignm identity:	289
Alignm E-value:	1e-39
Alignm gaps (pig, cow):	95, 37
Conread position:	15-448
Cow position:	chr3:48296369-48296787 (view UCSC Genome Browser custom track)
Alignm length:	436
Alignm identity:	301
Alignm E-value:	0
Alignm gaps (pig, cow):	333, 210
Conread position:	15-449
Cow position:	chr3:65413629-65413187 (view UCSC Genome Browser custom track)
Alignm length:	452
Alignm identity:	327
Alignm E-value:	0
Alignm gaps (pig, cow):	48, 155
Conread position:	15-507
Cow position:	chr3:30179742-30180249 (view UCSC Genome Browser custom track)
Alignm length:	516
Alignm identity:	363
Alignm E-value:	0
Alignm gaps (pig, cow):	88, 58
Conread position:	16-284
Cow position:	chr3:46856553-46856280 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	175
Alignm E-value:	5e-23
Alignm gaps (pig, cow):	91, 0
Conread position:	16-286
Cow position:	chr3:55117310-55117035 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	198
Alignm E-value:	3e-38
Alignm gaps (pig, cow):	93, 49
Conread position:	16-300
Cow position:	chr3:31903449-31903170 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	192
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	135, 0
Conread position:	16-304
Cow position:	chr3:22872393-22872099 (view UCSC Genome Browser custom track)
Alignm length:	295
Alignm identity:	213
Alignm E-value:	0
Alignm gaps (pig, cow):	93, 0
Conread position:	16-305
Cow position:	chr3:33633227-33632943 (view UCSC Genome Browser custom track)
Alignm length:	292
Alignm identity:	208
Alignm E-value:	3.99931e-42
Alignm gaps (pig, cow):	93, 74
Conread position:	16-308
Cow position:	chr3:12323727-12324026 (view UCSC Genome Browser custom track)
Alignm length:	305
Alignm identity:	211
Alignm E-value:	6e-35
Alignm gaps (pig, cow):	93, 71