Non-Coding RNA Search

Cow genome map


           Conread name:
           rpigcf0_008845.y1
        

               Conread position:
               6-427
               

               Cow position:
               chr6:39093474-39093883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               5, 84
               

               Conread position:
               10-448
               

               Cow position:
               chr6:2546959-2547408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 119
               

               Conread position:
               11-383
               

               Cow position:
               chr6:33984673-33985066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               49, 154
               

               Conread position:
               12-403
               

               Cow position:
               chr6:59508066-59508464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               12-455
               

               Cow position:
               chr6:5095836-5095382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 166
               

               Conread position:
               12-469
               

               Cow position:
               chr6:8318447-8317993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 51
               

               Conread position:
               12-504
               

               Cow position:
               chr6:6943959-6943478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 52
               

               Conread position:
               12-506
               

               Cow position:
               chr6:4022825-4023312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 8
               

               Conread position:
               15-294
               

               Cow position:
               chr6:61575325-61575610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               100, 213
               

               Conread position:
               15-373
               

               Cow position:
               chr6:56926918-56927278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               102, 277
               

               Conread position:
               15-432
               

               Cow position:
               chr6:35725813-35726232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               284
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               94, 78
               

               Conread position:
               15-469
               

               Cow position:
               chr6:67214463-67214922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 154
               

               Conread position:
               16-278
               

               Cow position:
               chr6:1784043-1783792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               16-284
               

               Cow position:
               chr6:21712578-21712852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               16-291
               

               Cow position:
               chr6:32916198-32915926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 155
               

               Conread position:
               16-292
               

               Cow position:
               chr6:24327413-24327142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               16-297
               

               Cow position:
               chr6:50446037-50445756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               195, 89
               

               Conread position:
               16-301
               

               Cow position:
               chr6:10332384-10332082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               61, 202
               

               Conread position:
               16-303
               

               Cow position:
               chr6:15046372-15046070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               61, 11
               

               Conread position:
               16-305
               

               Cow position:
               chr6:12927845-12928132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               95, 29
               

               Conread position:
               16-346
               

               Cow position:
               chr6:5958293-5957979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               156, 14
               

               Conread position:
               16-346
               

               Cow position:
               chr6:16737743-16738068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 212
               

               Conread position:
               16-346
               

               Cow position:
               chr6:62479443-62479111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               93, 175
               

               Conread position:
               16-347
               

               Cow position:
               chr6:60456553-60456879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 49
               

               Conread position:
               16-354
               

               Cow position:
               chr6:12629736-12630079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               23, 200
               

               Conread position:
               16-361
               

               Cow position:
               chr6:66304118-66303775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               191, 25
               

               Conread position:
               16-363
               

               Cow position:
               chr6:34075749-34076096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               249
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               95, 45
               

               Conread position:
               16-367
               

               Cow position:
               chr6:7137470-7137117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               93, 249
               

               Conread position:
               16-367
               

               Cow position:
               chr6:7449367-7449716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               101, 295
               

               Conread position:
               16-367
               

               Cow position:
               chr6:56441208-56440855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               101, 276
               

               Conread position:
               16-368
               

               Cow position:
               chr6:642855-642496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 279
               

               Conread position:
               16-369
               

               Cow position:
               chr6:3978939-3978580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               251
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               150, 57
               

               Conread position:
               16-373
               

               Cow position:
               chr6:13494219-13493860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               101, 289
               

               Conread position:
               16-373
               

               Cow position:
               chr6:56080045-56079688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               88, 139
               

               Conread position:
               16-379
               

               Cow position:
               chr6:44098810-44099169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 45
               

               Conread position:
               16-388
               

               Cow position:
               chr6:28148568-28148927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               22, 70
               

               Conread position:
               16-390
               

               Cow position:
               chr6:28293953-28293574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               101, 294
               

               Conread position:
               16-399
               

               Cow position:
               chr6:1770473-1770095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 148
               

               Conread position:
               16-399
               

               Cow position:
               chr6:51733953-51734333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               93, 41
               

               Conread position:
               16-400
               

               Cow position:
               chr6:6768999-6769384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               101, 139
               

               Conread position:
               16-400
               

               Cow position:
               chr6:55040495-55040110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               86, 153
               

               Conread position:
               16-412
               

               Cow position:
               chr6:2607336-2607723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               274
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               83, 38
               

               Conread position:
               16-416
               

               Cow position:
               chr6:11789124-11789509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 191
               

               Conread position:
               16-420
               

               Cow position:
               chr6:18049303-18048899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 135
               

               Conread position:
               16-422
               

               Cow position:
               chr6:31635965-31635557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 83
               

               Conread position:
               16-422
               

               Cow position:
               chr6:47305050-47305467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 71
               

               Conread position:
               16-423
               

               Cow position:
               chr6:53401093-53401484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 57
               

               Conread position:
               16-427
               

               Cow position:
               chr6:60057943-60057523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               16-434
               

               Cow position:
               chr6:31525774-31526185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 38
               

               Conread position:
               16-437
               

               Cow position:
               chr6:63272895-63272470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               284
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               61, 215
               

               Conread position:
               16-440
               

               Cow position:
               chr6:14839304-14838899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               293
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               154, 89
               

               Conread position:
               16-445
               

               Cow position:
               chr6:14958621-14958190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 27
               

               Conread position:
               16-447
               

               Cow position:
               chr6:6343150-6343582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               16-447
               

               Cow position:
               chr6:21004378-21004828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 71
               

               Conread position:
               16-447
               

               Cow position:
               chr6:35103602-35103176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 44
               

               Conread position:
               16-448
               

               Cow position:
               chr6:6067966-6067548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               314
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               57, 43
               

               Conread position:
               16-448
               

               Cow position:
               chr6:11169430-11169855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 90
               

               Conread position:
               16-448
               

               Cow position:
               chr6:19681794-19681372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 59
               

               Conread position:
               16-448
               

               Cow position:
               chr6:27851982-27851555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 170
               

               Conread position:
               16-448
               

               Cow position:
               chr6:33302133-33302547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               91, 24
               

               Conread position:
               16-449
               

               Cow position:
               chr6:10176576-10176148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 51
               

               Conread position:
               16-449
               

               Cow position:
               chr6:35181530-35181103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 25
               

               Conread position:
               16-449
               

               Cow position:
               chr6:35842383-35842811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 92
               

               Conread position:
               16-449
               

               Cow position:
               chr6:35990506-35990080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 56
               

               Conread position:
               16-449
               

               Cow position:
               chr6:46465550-46465975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               289
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               99, 158
               

               Conread position:
               16-449
               

               Cow position:
               chr6:47339634-47339202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 101
               

               Conread position:
               16-451
               

               Cow position:
               chr6:16706732-16707168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 45
               

               Conread position:
               16-451
               

               Cow position:
               chr6:28482737-28483172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 282
               

               Conread position:
               16-452
               

               Cow position:
               chr6:54867234-54867674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 41
               

               Conread position:
               16-458
               

               Cow position:
               chr6:51387488-51387912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 51
               

               Conread position:
               16-469
               

               Cow position:
               chr6:21534781-21535213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 155
               

               Conread position:
               16-480
               

               Cow position:
               chr6:57119205-57118758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 43
               

               Conread position:
               16-485
               

               Cow position:
               chr6:19427172-19427640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 63
               

               Conread position:
               16-497
               

               Cow position:
               chr6:9008885-9008406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 54
               

               Conread position:
               16-504
               

               Cow position:
               chr6:33852061-33851592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               317
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               290, 97
               

               Conread position:
               16-505
               

               Cow position:
               chr6:40031916-40032407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 147
               

               Conread position:
               16-505
               

               Cow position:
               chr6:46292608-46292127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 53
               

               Conread position:
               16-506
               

               Cow position:
               chr6:24004269-24004749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 94
               

               Conread position:
               16-506
               

               Cow position:
               chr6:28147973-28148459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 66
               

               Conread position:
               16-506
               

               Cow position:
               chr6:32121633-32122124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 205
               

               Conread position:
               16-507
               

               Cow position:
               chr6:4468483-4468996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               532
               

               Alignm identity:
               351
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               86, 38
               

               Conread position:
               16-507
               

               Cow position:
               chr6:16699984-16700484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 38
               

               Conread position:
               16-508
               

               Cow position:
               chr6:20255658-20255194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               16-508
               

               Cow position:
               chr6:28476900-28477380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 56
               

               Conread position:
               16-508
               

               Cow position:
               chr6:28811273-28810793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 59
               

               Conread position:
               16-508
               

               Cow position:
               chr6:32125789-32126283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 190
               

               Conread position:
               16-508
               

               Cow position:
               chr6:34196426-34195931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 155
               

               Conread position:
               16-508
               

               Cow position:
               chr6:36470843-36470347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 160
               

               Conread position:
               16-508
               

               Cow position:
               chr6:36652152-36652630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 16
               

               Conread position:
               16-508
               

               Cow position:
               chr6:37611832-37612318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               342
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               27, 122
               

               Conread position:
               16-508
               

               Cow position:
               chr6:65870746-65871262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               517
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               17-254
               

               Cow position:
               chr6:10649295-10649063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               17-338
               

               Cow position:
               chr6:9733107-9732798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               92, 13
               

               Conread position:
               17-418
               

               Cow position:
               chr6:57164150-57164552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 95
               

               Conread position:
               17-439
               

               Cow position:
               chr6:222717-222310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               92, 122
               

               Conread position:
               17-443
               

               Cow position:
               chr6:6060834-6060424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 157
               

               Conread position:
               17-448
               

               Cow position:
               chr6:55842437-55842011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               289
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               94, 137
               

               Conread position:
               17-451
               

               Cow position:
               chr6:15938141-15937700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 125
               

               Conread position:
               17-498
               

               Cow position:
               chr6:24583513-24583029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 75
               

               Conread position:
               17-504
               

               Cow position:
               chr6:63047299-63047803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               17-507
               

               Cow position:
               chr6:42565409-42565900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 107
               

               Conread position:
               17-508
               

               Cow position:
               chr6:17557098-17557606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               327
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               92, 86
               

               Conread position:
               17-508
               

               Cow position:
               chr6:38771021-38771502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 32
               

               Conread position:
               17-508
               

               Cow position:
               chr6:55474973-55475468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 78
               

               Conread position:
               18-342
               

               Cow position:
               chr6:20231101-20230781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               91, 101
               

               Conread position:
               18-443
               

               Cow position:
               chr6:5302675-5302272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 35
               

               Conread position:
               18-448
               

               Cow position:
               chr6:323586-323154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               99, 241
               

               Conread position:
               18-448
               

               Cow position:
               chr6:24781839-24781408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 291
               

               Conread position:
               18-449
               

               Cow position:
               chr6:32867482-32867065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 198
               

               Conread position:
               18-449
               

               Cow position:
               chr6:51674634-51675061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 164
               

               Conread position:
               18-487
               

               Cow position:
               chr6:42693087-42693557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 320
               

               Conread position:
               18-497
               

               Cow position:
               chr6:16675550-16676010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               331, 25
               

               Conread position:
               18-506
               

               Cow position:
               chr6:24623259-24622768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               327
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               61, 78
               

               Conread position:
               18-508
               

               Cow position:
               chr6:12337709-12338221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               514
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 434
               

               Conread position:
               18-508
               

               Cow position:
               chr6:16625672-16626158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 205
               

               Conread position:
               18-508
               

               Cow position:
               chr6:34549133-34549607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 96
               

               Conread position:
               19-408
               

               Cow position:
               chr6:50746702-50747110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 121
               

               Conread position:
               20-451
               

               Cow position:
               chr6:44078242-44078669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 172
               

               Conread position:
               20-508
               

               Cow position:
               chr6:63197441-63196950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 9
               

               Conread position:
               21-449
               

               Cow position:
               chr6:54365596-54365178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 89
               

               Conread position:
               21-508
               

               Cow position:
               chr6:48807266-48806801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 44
               

               Conread position:
               22-301
               

               Cow position:
               chr6:40264469-40264192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               89, 148
               

               Conread position:
               22-427
               

               Cow position:
               chr6:26728798-26728400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 142
               

               Conread position:
               22-449
               

               Cow position:
               chr6:13367028-13367439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 42
               

               Conread position:
               26-473
               

               Cow position:
               chr6:44372211-44371763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 164
               

               Conread position:
               27-408
               

               Cow position:
               chr6:35471793-35471397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               82, 202
               

               Conread position:
               28-506
               

               Cow position:
               chr6:45596790-45596317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               29-449
               

               Cow position:
               chr6:61515462-61515039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 274
               

               Conread position:
               29-504
               

               Cow position:
               chr6:47026212-47026686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 202
               

               Conread position:
               30-448
               

               Cow position:
               chr6:40713762-40713356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               284
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               81, 13
               

               Conread position:
               32-508
               

               Cow position:
               chr6:65872797-65873241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               322
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               77, 41
               

               Conread position:
               36-362
               

               Cow position:
               chr6:65839132-65838804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               81, 275
               

               Conread position:
               39-449
               

               Cow position:
               chr6:3952270-3952672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 71
               

               Conread position:
               40-373
               

               Cow position:
               chr6:30016121-30015786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               69, 252
               

               Conread position:
               40-449
               

               Cow position:
               chr6:53933094-53932694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 67
               

               Conread position:
               43-432
               

               Cow position:
               chr6:13592462-13592846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               44-448
               

               Cow position:
               chr6:20605685-20606112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               294
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               46-449
               

               Cow position:
               chr6:15242588-15242990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               47-438
               

               Cow position:
               chr6:56849771-56850162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 116
               

               Conread position:
               48-300
               

               Cow position:
               chr6:2423503-2423750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 86
               

               Conread position:
               50-408
               

               Cow position:
               chr6:35539742-35539396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               54-397
               

               Cow position:
               chr6:61113510-61113868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               54-448
               

               Cow position:
               chr6:41375513-41375923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               37, 42
               

               Conread position:
               55-434
               

               Cow position:
               chr6:20098203-20097820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 166
               

               Conread position:
               56-427
               

               Cow position:
               chr6:27110352-27110729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 10
               

               Conread position:
               57-508
               

               Cow position:
               chr6:56376584-56376140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 55
               

               Conread position:
               60-297
               

               Cow position:
               chr6:1891079-1890840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               55, 185
               

               Conread position:
               65-300
               

               Cow position:
               chr6:45160520-45160287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               42, 105
               

               Conread position:
               65-434
               

               Cow position:
               chr6:38614595-38614951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 106
               

               Conread position:
               66-434
               

               Cow position:
               chr6:60350527-60350153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 159
               

               Conread position:
               66-450
               

               Cow position:
               chr6:67950731-67951104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 108
               

               Conread position:
               66-506
               

               Cow position:
               chr6:7824535-7824957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 32
               

               Conread position:
               67-507
               

               Cow position:
               chr6:19401635-19402075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               42, 105
               

               Conread position:
               69-483
               

               Cow position:
               chr6:38641272-38641677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 106
               

               Conread position:
               70-397
               

               Cow position:
               chr6:54600145-54600449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               70-430
               

               Cow position:
               chr6:66874138-66874484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 85
               

               Conread position:
               70-448
               

               Cow position:
               chr6:21869869-21869496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 104
               

               Conread position:
               71-306
               

               Cow position:
               chr6:39994684-39994450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               38, 165
               

               Conread position:
               71-326
               

               Cow position:
               chr6:52401638-52401893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               40, 96
               

               Conread position:
               71-353
               

               Cow position:
               chr6:56041845-56041566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               38, 126
               

               Conread position:
               71-362
               

               Cow position:
               chr6:56902641-56902930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               44, 155
               

               Conread position:
               71-421
               

               Cow position:
               chr6:30474108-30474454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               104, 42
               

               Conread position:
               71-439
               

               Cow position:
               chr6:23248186-23247822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               258
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               38, 154
               

               Conread position:
               71-447
               

               Cow position:
               chr6:44194768-44194398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 153
               

               Conread position:
               71-448
               

               Cow position:
               chr6:28977254-28976887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 117
               

               Conread position:
               71-449
               

               Cow position:
               chr6:38440959-38441326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 134
               

               Conread position:
               71-504
               

               Cow position:
               chr6:17090376-17090808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 37
               

               Conread position:
               71-506
               

               Cow position:
               chr6:6995167-6994748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 38
               

               Conread position:
               71-508
               

               Cow position:
               chr6:31564556-31564121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 121
               

               Conread position:
               71-508
               

               Cow position:
               chr6:45065229-45064804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               71-508
               

               Cow position:
               chr6:48573105-48572670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 25
               

               Conread position:
               71-508
               

               Cow position:
               chr6:54490963-54490515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 103
               

               Conread position:
               72-470
               

               Cow position:
               chr6:7539351-7539747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               275
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               33, 137
               

               Conread position:
               73-294
               

               Cow position:
               chr6:30786369-30786154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               36, 93
               

               Conread position:
               73-363
               

               Cow position:
               chr6:49685364-49685649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               36, 140
               

               Conread position:
               73-411
               

               Cow position:
               chr6:29239722-29240055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               33, 82
               

               Conread position:
               73-423
               

               Cow position:
               chr6:47327289-47326945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               247
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               32, 151
               

               Conread position:
               73-447
               

               Cow position:
               chr6:41733406-41733784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               260
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               36, 98
               

               Conread position:
               73-449
               

               Cow position:
               chr6:38207716-38207338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 158
               

               Conread position:
               73-506
               

               Cow position:
               chr6:7190340-7189902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 133
               

               Conread position:
               73-506
               

               Cow position:
               chr6:51893734-51893296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               297
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               36, 240
               

               Conread position:
               74-434
               

               Cow position:
               chr6:21110749-21111090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 115
               

               Conread position:
               74-448
               

               Cow position:
               chr6:55282509-55282140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               259
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               34, 132
               

               Conread position:
               74-508
               

               Cow position:
               chr6:38018054-38018469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               296
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 96
               

               Conread position:
               76-449
               

               Cow position:
               chr6:60442201-60442561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               31, 123
               

               Conread position:
               77-343
               

               Cow position:
               chr6:48344111-48344379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 154
               

               Conread position:
               77-347
               

               Cow position:
               chr6:25773598-25773335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               32, 77
               

               Conread position:
               77-360
               

               Cow position:
               chr6:1907322-1907608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               25, 150
               

               Conread position:
               77-364
               

               Cow position:
               chr6:5445412-5445691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               77-415
               

               Cow position:
               chr6:35415738-35415396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 50
               

               Conread position:
               77-434
               

               Cow position:
               chr6:242597-242930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               255
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               32, 72
               

               Conread position:
               78-508
               

               Cow position:
               chr6:899500-899090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               271, 35
               

               Conread position:
               79-302
               

               Cow position:
               chr6:15923212-15922990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               79-449
               

               Cow position:
               chr6:17997530-17997166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 187
               

               Conread position:
               79-508
               

               Cow position:
               chr6:31425778-31425347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               298
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               30, 115
               

               Conread position:
               79-508
               

               Cow position:
               chr6:35435788-35436218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 112
               

               Conread position:
               81-307
               

               Cow position:
               chr6:62324777-62325010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               81-389
               

               Cow position:
               chr6:24961932-24962238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               28, 146
               

               Conread position:
               81-449
               

               Cow position:
               chr6:37148985-37149343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 29
               

               Conread position:
               81-508
               

               Cow position:
               chr6:827919-827495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 114
               

               Conread position:
               82-389
               

               Cow position:
               chr6:57405336-57405032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               83-505
               

               Cow position:
               chr6:53139140-53138710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 278
               

               Conread position:
               83-508
               

               Cow position:
               chr6:23532452-23532877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               304
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               26, 120
               

               Conread position:
               84-449
               

               Cow position:
               chr6:54701330-54701697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               33, 207
               

               Conread position:
               89-426
               

               Cow position:
               chr6:7989618-7989284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               85, 20
               

               Conread position:
               89-447
               

               Cow position:
               chr6:53519825-53519472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               191, 21
               

               Conread position:
               89-449
               

               Cow position:
               chr6:54864871-54864506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 84
               

               Conread position:
               89-506
               

               Cow position:
               chr6:15782730-15782304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 112
               

               Conread position:
               89-508
               

               Cow position:
               chr6:24223366-24222946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 238
               

               Conread position:
               90-434
               

               Cow position:
               chr6:415891-416264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               265
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               90-464
               

               Cow position:
               chr6:14658403-14658774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               84, 109
               

               Conread position:
               90-506
               

               Cow position:
               chr6:6367866-6367463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 60
               

               Conread position:
               91-449
               

               Cow position:
               chr6:37199748-37199384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               18, 224
               

               Conread position:
               91-460
               

               Cow position:
               chr6:66131105-66131469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               91-508
               

               Cow position:
               chr6:24545414-24545826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 99
               

               Conread position:
               92-449
               

               Cow position:
               chr6:16191466-16191825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               82, 65
               

               Conread position:
               94-470
               

               Cow position:
               chr6:54144102-54144477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 131
               

               Conread position:
               95-397
               

               Cow position:
               chr6:20157129-20157434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               46, 13
               

               Conread position:
               95-451
               

               Cow position:
               chr6:30973846-30974192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               95-505
               

               Cow position:
               chr6:65871702-65872096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 13
               

               Conread position:
               96-313
               

               Cow position:
               chr6:33276841-33277060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               96-423
               

               Cow position:
               chr6:50271292-50270984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 125
               

               Conread position:
               96-434
               

               Cow position:
               chr6:8788235-8787898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 94
               

               Conread position:
               96-448
               

               Cow position:
               chr6:63299221-63298878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 13
               

               Conread position:
               96-449
               

               Cow position:
               chr6:59069826-59069466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               96-449
               

               Cow position:
               chr6:67456505-67456872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 216
               

               Conread position:
               96-451
               

               Cow position:
               chr6:528474-528128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               7, 128
               

               Conread position:
               96-506
               

               Cow position:
               chr6:15997418-15997010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 17
               

               Conread position:
               96-508
               

               Cow position:
               chr6:21231338-21231743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 78
               

               Conread position:
               97-449
               

               Cow position:
               chr6:12092180-12091838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               14, 69
               

               Conread position:
               97-482
               

               Cow position:
               chr6:7173960-7173567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               14, 135
               

               Conread position:
               98-354
               

               Cow position:
               chr6:53731325-53731582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               11, 195
               

               Conread position:
               98-434
               

               Cow position:
               chr6:16423503-16423840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               98-505
               

               Cow position:
               chr6:3545508-3545887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 67
               

               Conread position:
               98-508
               

               Cow position:
               chr6:12652010-12652411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 124
               

               Conread position:
               98-508
               

               Cow position:
               chr6:33918047-33917626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 128
               

               Conread position:
               100-343
               

               Cow position:
               chr6:18968965-18968734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               100-355
               

               Cow position:
               chr6:61137179-61137434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               76, 123
               

               Conread position:
               100-379
               

               Cow position:
               chr6:14850908-14850631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               11, 97
               

               Conread position:
               107-422
               

               Cow position:
               chr6:25008529-25008845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               214, 97
               

               Conread position:
               108-420
               

               Cow position:
               chr6:28318225-28318522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               237, 61
               

               Conread position:
               110-400
               

               Cow position:
               chr6:67968796-67968506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               64, 114
               

               Conread position:
               110-434
               

               Cow position:
               chr6:52412672-52412997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               64, 187
               

               Conread position:
               110-448
               

               Cow position:
               chr6:47799116-47799446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 43
               

               Conread position:
               110-506
               

               Cow position:
               chr6:47574723-47575120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 109
               

               Conread position:
               113-336
               

               Cow position:
               chr6:52025833-52025611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               104, 184
               

               Conread position:
               113-508
               

               Cow position:
               chr6:52901062-52901448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 38
               

               Conread position:
               114-286
               

               Cow position:
               chr6:6226846-6227011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 40
               

               Conread position:
               115-449
               

               Cow position:
               chr6:37783237-37783554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               168, 29
               

               Conread position:
               116-343
               

               Cow position:
               chr6:49604507-49604722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               117-397
               

               Cow position:
               chr6:21456865-21456583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               57, 77
               

               Conread position:
               117-449
               

               Cow position:
               chr6:8125157-8125480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               231, 55
               

               Conread position:
               118-434
               

               Cow position:
               chr6:35993403-35993722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 160
               

               Conread position:
               119-449
               

               Cow position:
               chr6:12668934-12669248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               97, 50
               

               Conread position:
               119-507
               

               Cow position:
               chr6:65264708-65264321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               229, 51
               

               Conread position:
               119-508
               

               Cow position:
               chr6:65259640-65259279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               229, 26
               

               Conread position:
               120-434
               

               Cow position:
               chr6:17334229-17333915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               59, 173
               

               Conread position:
               120-434
               

               Cow position:
               chr6:47355652-47355961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               229, 105
               

               Conread position:
               121-312
               

               Cow position:
               chr6:54287909-54288091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               101, 47
               

               Conread position:
               122-471
               

               Cow position:
               chr6:15447378-15447024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 108
               

               Conread position:
               123-448
               

               Cow position:
               chr6:11246595-11246919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               267, 41
               

               Conread position:
               124-452
               

               Cow position:
               chr6:19446092-19446407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               224, 37
               

               Conread position:
               125-403
               

               Cow position:
               chr6:48442411-48442678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               95, 73
               

               Conread position:
               126-434
               

               Cow position:
               chr6:50318222-50317906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 74
               

               Conread position:
               127-397
               

               Cow position:
               chr6:60850555-60850279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               47, 179
               

               Conread position:
               128-404
               

               Cow position:
               chr6:60783706-60783979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               200, 63
               

               Conread position:
               129-306
               

               Cow position:
               chr6:32987161-32986986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               129-394
               

               Cow position:
               chr6:59108779-59109043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               83, 32
               

               Conread position:
               130-449
               

               Cow position:
               chr6:57546378-57546075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               35, 87
               

               Conread position:
               131-420
               

               Cow position:
               chr6:55763693-55763978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               94, 55
               

               Conread position:
               132-420
               

               Cow position:
               chr6:12543093-12542805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 87
               

               Conread position:
               133-292
               

               Cow position:
               chr6:52705876-52705723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               133-355
               

               Cow position:
               chr6:19351313-19351099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               133-421
               

               Cow position:
               chr6:47204314-47204601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               41, 89
               

               Conread position:
               133-448
               

               Cow position:
               chr6:14914398-14914083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               91, 36
               

               Conread position:
               133-507
               

               Cow position:
               chr6:78071-77707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               54, 110
               

               Conread position:
               136-506
               

               Cow position:
               chr6:27815625-27815269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 48
               

               Conread position:
               136-506
               

               Cow position:
               chr6:60739859-60740239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 159
               

               Conread position:
               137-447
               

               Cow position:
               chr6:67323161-67323461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               211, 112
               

               Conread position:
               137-448
               

               Cow position:
               chr6:7128555-7128251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               207, 53
               

               Conread position:
               137-508
               

               Cow position:
               chr6:17534677-17534306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               5, 110
               

               Conread position:
               140-449
               

               Cow position:
               chr6:4692136-4691822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               34, 281
               

               Conread position:
               144-508
               

               Cow position:
               chr6:53673715-53674073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 48
               

               Conread position:
               145-508
               

               Cow position:
               chr6:38453930-38453569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 170
               

               Conread position:
               145-508
               

               Cow position:
               chr6:55892615-55892966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               29, 84
               

               Conread position:
               146-440
               

               Cow position:
               chr6:19264641-19264354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               165, 24
               

               Conread position:
               146-448
               

               Cow position:
               chr6:17313589-17313886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               202, 15
               

               Conread position:
               146-449
               

               Cow position:
               chr6:57571332-57571633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               89, 14
               

               Conread position:
               147-472
               

               Cow position:
               chr6:36194442-36194771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               27, 114
               

               Conread position:
               147-480
               

               Cow position:
               chr6:50034860-50034545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               146, 31
               

               Conread position:
               154-346
               

               Cow position:
               chr6:29266067-29266253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               84, 32
               

               Conread position:
               154-508
               

               Cow position:
               chr6:28156284-28155942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               51, 37
               

               Conread position:
               157-447
               

               Cow position:
               chr6:19996485-19996765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               157-449
               

               Cow position:
               chr6:9219138-9219420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               191, 70
               

               Conread position:
               157-449
               

               Cow position:
               chr6:43135079-43134785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               47, 99
               

               Conread position:
               157-508
               

               Cow position:
               chr6:60118011-60118373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 133
               

               Conread position:
               159-427
               

               Cow position:
               chr6:38609835-38610100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               189, 132
               

               Conread position:
               159-493
               

               Cow position:
               chr6:59588543-59588211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               8, 64
               

               Conread position:
               161-434
               

               Cow position:
               chr6:12845246-12845514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               5, 143
               

               Conread position:
               161-449
               

               Cow position:
               chr6:45388199-45388477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               177, 59
               

               Conread position:
               161-506
               

               Cow position:
               chr6:51840139-51840496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               81, 59
               

               Conread position:
               161-508
               

               Cow position:
               chr6:47616740-47616409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               82, 60
               

               Conread position:
               163-408
               

               Cow position:
               chr6:62929367-62929608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               174, 69
               

               Conread position:
               165-368
               

               Cow position:
               chr6:5413692-5413894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               34, 137
               

               Conread position:
               165-397
               

               Cow position:
               chr6:20206149-20206376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               50, 33
               

               Conread position:
               165-449
               

               Cow position:
               chr6:582398-582119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               183, 54
               

               Conread position:
               166-446
               

               Cow position:
               chr6:23402115-23401842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               182, 53
               

               Conread position:
               168-448
               

               Cow position:
               chr6:33206628-33206888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               110, 20
               

               Conread position:
               169-507
               

               Cow position:
               chr6:20754408-20754090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               171, 16
               

               Conread position:
               172-363
               

               Cow position:
               chr6:38233840-38234026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               176, 19
               

               Conread position:
               172-432
               

               Cow position:
               chr6:62669754-62670001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               176, 16
               

               Conread position:
               172-447
               

               Cow position:
               chr6:48803757-48803487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               25, 49
               

               Conread position:
               172-448
               

               Cow position:
               chr6:54573123-54573412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               172-449
               

               Cow position:
               chr6:21234924-21235197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               176, 47
               

               Conread position:
               172-449
               

               Cow position:
               chr6:36189577-36189851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               176, 118
               

               Conread position:
               172-508
               

               Cow position:
               chr6:30160203-30160530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               174-338
               

               Cow position:
               chr6:1510470-1510632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               176-449
               

               Cow position:
               chr6:58597620-58597351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               173, 43
               

               Conread position:
               177-446
               

               Cow position:
               chr6:60667303-60667561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               39, 120
               

               Conread position:
               180-449
               

               Cow position:
               chr6:10039609-10039877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               51, 79
               

               Conread position:
               180-473
               

               Cow position:
               chr6:47190050-47189762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               181-449
               

               Cow position:
               chr6:9719034-9718760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               182-508
               

               Cow position:
               chr6:59603317-59602984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               167, 37
               

               Conread position:
               183-448
               

               Cow position:
               chr6:26043643-26043892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               112, 37
               

               Conread position:
               185-508
               

               Cow position:
               chr6:36645281-36645605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 82
               

               Conread position:
               187-434
               

               Cow position:
               chr6:66375435-66375194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               162, 38
               

               Conread position:
               191-508
               

               Cow position:
               chr6:56860448-56860751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 29
               

               Conread position:
               192-448
               

               Cow position:
               chr6:1429539-1429792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               65, 27
               

               Conread position:
               192-452
               

               Cow position:
               chr6:58370653-58370907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               156, 190
               

               Conread position:
               192-506
               

               Cow position:
               chr6:7119710-7119401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               153, 27
               

               Conread position:
               192-507
               

               Cow position:
               chr6:62371281-62370957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 110
               

               Conread position:
               192-508
               

               Cow position:
               chr6:20196393-20196095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               156, 28
               

               Conread position:
               193-397
               

               Cow position:
               chr6:16266620-16266825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 100
               

               Conread position:
               193-440
               

               Cow position:
               chr6:17549080-17548829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               193-508
               

               Cow position:
               chr6:4164268-4163958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               147, 109
               

               Conread position:
               194-434
               

               Cow position:
               chr6:19292700-19292940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               99, 70
               

               Conread position:
               196-449
               

               Cow position:
               chr6:3592305-3592551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               131, 44
               

               Conread position:
               197-434
               

               Cow position:
               chr6:44867636-44867404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               197-434
               

               Cow position:
               chr6:59718701-59718935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               129, 21
               

               Conread position:
               198-413
               

               Cow position:
               chr6:54208233-54208017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               198-449
               

               Cow position:
               chr6:17794850-17794610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               150, 38
               

               Conread position:
               198-506
               

               Cow position:
               chr6:35775078-35774772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               200-448
               

               Cow position:
               chr6:143460-143222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               145, 19
               

               Conread position:
               201-506
               

               Cow position:
               chr6:10487496-10487786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 19
               

               Conread position:
               204-446
               

               Cow position:
               chr6:6673014-6673258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               206-434
               

               Cow position:
               chr6:51968981-51969215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               79, 14
               

               Conread position:
               206-507
               

               Cow position:
               chr6:37462936-37463235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 14
               

               Conread position:
               210-402
               

               Cow position:
               chr6:54365085-54364887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               109, 15
               

               Conread position:
               210-443
               

               Cow position:
               chr6:67281812-67282042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               15, 81
               

               Conread position:
               214-449
               

               Cow position:
               chr6:5330336-5330565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               134, 26
               

               Conread position:
               214-449
               

               Cow position:
               chr6:33509711-33509940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               112, 79
               

               Conread position:
               215-448
               

               Cow position:
               chr6:2623704-2623926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               182, 79
               

               Conread position:
               215-499
               

               Cow position:
               chr6:40734-40448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               216-508
               

               Cow position:
               chr6:22985935-22985631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               129, 75
               

               Conread position:
               217-449
               

               Cow position:
               chr6:37395485-37395246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               219-397
               

               Cow position:
               chr6:23353479-23353651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               223-434
               

               Cow position:
               chr6:61142634-61142423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               126, 72
               

               Conread position:
               224-448
               

               Cow position:
               chr6:16288121-16287908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               124, 70
               

               Conread position:
               224-463
               

               Cow position:
               chr6:33929619-33929378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 82
               

               Conread position:
               225-507
               

               Cow position:
               chr6:54479217-54478939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               93, 15
               

               Conread position:
               227-448
               

               Cow position:
               chr6:17068715-17068495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               122, 72
               

               Conread position:
               227-457
               

               Cow position:
               chr6:36284176-36284402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               96, 72
               

               Conread position:
               237-449
               

               Cow position:
               chr6:18144137-18144351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               111, 33
               

               Conread position:
               241-508
               

               Cow position:
               chr6:24557830-24558090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               51, 57
               

               Conread position:
               241-508
               

               Cow position:
               chr6:36454644-36454383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 58
               

               Conread position:
               242-400
               

               Cow position:
               chr6:60468186-60468342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               242-434
               

               Cow position:
               chr6:59633083-59633274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               103, 80
               

               Conread position:
               242-456
               

               Cow position:
               chr6:7835865-7836075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               73, 60
               

               Conread position:
               243-439
               

               Cow position:
               chr6:17527638-17527445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               105, 61
               

               Conread position:
               243-440
               

               Cow position:
               chr6:68652403-68652206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               105, 61
               

               Conread position:
               244-461
               

               Cow position:
               chr6:16352396-16352187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               104, 70
               

               Conread position:
               244-499
               

               Cow position:
               chr6:51294234-51294489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 60
               

               Conread position:
               248-449
               

               Cow position:
               chr6:19131386-19131584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               100, 11
               

               Conread position:
               248-455
               

               Cow position:
               chr6:2153643-2153439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 45
               

               Conread position:
               248-505
               

               Cow position:
               chr6:54062617-54062872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               97, 66
               

               Conread position:
               249-449
               

               Cow position:
               chr6:2584898-2585096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               99, 7
               

               Conread position:
               250-434
               

               Cow position:
               chr6:48468961-48469138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 28
               

               Conread position:
               250-448
               

               Cow position:
               chr6:2078863-2078662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 192
               

               Conread position:
               250-449
               

               Cow position:
               chr6:67451415-67451217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               97, 17
               

               Conread position:
               250-473
               

               Cow position:
               chr6:16733364-16733592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               59, 123
               

               Conread position:
               250-507
               

               Cow position:
               chr6:55417570-55417303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 49
               

               Conread position:
               253-508
               

               Cow position:
               chr6:510338-510092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 39
               

               Conread position:
               254-507
               

               Cow position:
               chr6:44623568-44623818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               94, 48
               

               Conread position:
               258-508
               

               Cow position:
               chr6:2899606-2899353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               260-420
               

               Cow position:
               chr6:8094324-8094167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               85, 47
               

               Conread position:
               266-447
               

               Cow position:
               chr6:46330892-46331071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 100
               

               Conread position:
               266-500
               

               Cow position:
               chr6:57287687-57287448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               82, 14
               

               Conread position:
               267-422
               

               Cow position:
               chr6:51086044-51086195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               81, 32
               

               Conread position:
               268-506
               

               Cow position:
               chr6:13718737-13718975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               268-508
               

               Cow position:
               chr6:34235439-34235201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               271-507
               

               Cow position:
               chr6:47885044-47884815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 31
               

               Conread position:
               275-451
               

               Cow position:
               chr6:59301806-59301632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               275-508
               

               Cow position:
               chr6:30701425-30701654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               124, 31
               

               Conread position:
               278-452
               

               Cow position:
               chr6:67806034-67805858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               281-447
               

               Cow position:
               chr6:60451409-60451579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 47
               

               Conread position:
               281-502
               

               Cow position:
               chr6:17349841-17349610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               69, 25
               

               Conread position:
               282-504
               

               Cow position:
               chr6:60503367-60503582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               66, 40
               

               Conread position:
               289-508
               

               Cow position:
               chr6:52705581-52705367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               60, 8
               

               Conread position:
               298-507
               

               Cow position:
               chr6:46676425-46676220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               303-499
               

               Cow position:
               chr6:12421284-12421086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               305-508
               

               Cow position:
               chr6:54127805-54127590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 106
               

               Conread position:
               308-502
               

               Cow position:
               chr6:59496230-59496421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 95
               

               Conread position:
               308-508
               

               Cow position:
               chr6:1475356-1475568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               309-447
               

               Cow position:
               chr6:7568135-7568276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               310-448
               

               Cow position:
               chr6:21475740-21475879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               38, 120
               

               Conread position:
               312-508
               

               Cow position:
               chr6:53938979-53939176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               37, 149
               

               Conread position:
               317-508
               

               Cow position:
               chr6:54204037-54203841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               327-508
               

               Cow position:
               chr6:42118732-42118923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               328-505
               

               Cow position:
               chr6:47192493-47192316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 94
               

               Conread position:
               328-508
               

               Cow position:
               chr6:66057803-66057985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               343-508
               

               Cow position:
               chr6:7707181-7707346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               109, 23
               

               Conread position:
               345-508
               

               Cow position:
               chr6:15172614-15172787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               347-508
               

               Cow position:
               chr6:47772912-47772750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               348-497
               

               Cow position:
               chr6:25224291-25224441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               353-506
               

               Cow position:
               chr6:58765357-58765204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 10
               

               Conread position:
               366-508
               

               Cow position:
               chr6:31225777-31225920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               37, 0
               
Show alignments to all cow chromosomes.
Conread position:	6-427
Cow position:	chr6:39093474-39093883 (view UCSC Genome Browser custom track)
Alignm length:	436
Alignm identity:	294
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	5, 84
Conread position:	10-448
Cow position:	chr6:2546959-2547408 (view UCSC Genome Browser custom track)
Alignm length:	453
Alignm identity:	305
Alignm E-value:	0
Alignm gaps (pig, cow):	164, 119
Conread position:	11-383
Cow position:	chr6:33984673-33985066 (view UCSC Genome Browser custom track)
Alignm length:	396
Alignm identity:	265
Alignm E-value:	5e-36
Alignm gaps (pig, cow):	49, 154
Conread position:	12-403
Cow position:	chr6:59508066-59508464 (view UCSC Genome Browser custom track)
Alignm length:	409
Alignm identity:	300
Alignm E-value:	0
Alignm gaps (pig, cow):	35, 79
Conread position:	12-455
Cow position:	chr6:5095836-5095382 (view UCSC Genome Browser custom track)
Alignm length:	463
Alignm identity:	322
Alignm E-value:	0
Alignm gaps (pig, cow):	67, 166
Conread position:	12-469
Cow position:	chr6:8318447-8317993 (view UCSC Genome Browser custom track)
Alignm length:	469
Alignm identity:	331
Alignm E-value:	0
Alignm gaps (pig, cow):	38, 51
Conread position:	12-504
Cow position:	chr6:6943959-6943478 (view UCSC Genome Browser custom track)
Alignm length:	504
Alignm identity:	353
Alignm E-value:	0
Alignm gaps (pig, cow):	87, 52
Conread position:	12-506
Cow position:	chr6:4022825-4023312 (view UCSC Genome Browser custom track)
Alignm length:	505
Alignm identity:	347
Alignm E-value:	0
Alignm gaps (pig, cow):	134, 8
Conread position:	15-294
Cow position:	chr6:61575325-61575610 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	205
Alignm E-value:	3.9937e-43
Alignm gaps (pig, cow):	100, 213
Conread position:	15-373
Cow position:	chr6:56926918-56927278 (view UCSC Genome Browser custom track)
Alignm length:	366
Alignm identity:	235
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	102, 277
Conread position:	15-432
Cow position:	chr6:35725813-35726232 (view UCSC Genome Browser custom track)
Alignm length:	428
Alignm identity:	284
Alignm E-value:	3.00018e-42
Alignm gaps (pig, cow):	94, 78
Conread position:	15-469
Cow position:	chr6:67214463-67214922 (view UCSC Genome Browser custom track)
Alignm length:	464
Alignm identity:	330
Alignm E-value:	0
Alignm gaps (pig, cow):	96, 154
Conread position:	16-278
Cow position:	chr6:1784043-1783792 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	188
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	93, 33
Conread position:	16-284
Cow position:	chr6:21712578-21712852 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	177
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	101, 0
Conread position:	16-291
Cow position:	chr6:32916198-32915926 (view UCSC Genome Browser custom track)
Alignm length:	278
Alignm identity:	205
Alignm E-value:	0
Alignm gaps (pig, cow):	93, 155
Conread position:	16-292
Cow position:	chr6:24327413-24327142 (view UCSC Genome Browser custom track)
Alignm length:	277
Alignm identity:	206
Alignm E-value:	0
Alignm gaps (pig, cow):	93, 0
Conread position:	16-297
Cow position:	chr6:50446037-50445756 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	200
Alignm E-value:	3e-40
Alignm gaps (pig, cow):	195, 89
Conread position:	16-301
Cow position:	chr6:10332384-10332082 (view UCSC Genome Browser custom track)
Alignm length:	304
Alignm identity:	213
Alignm E-value:	6e-37
Alignm gaps (pig, cow):	61, 202
Conread position:	16-303
Cow position:	chr6:15046372-15046070 (view UCSC Genome Browser custom track)
Alignm length:	305
Alignm identity:	219
Alignm E-value:	2e-39
Alignm gaps (pig, cow):	61, 11
Conread position:	16-305
Cow position:	chr6:12927845-12928132 (view UCSC Genome Browser custom track)
Alignm length:	294
Alignm identity:	210
Alignm E-value:	3.9937e-43
Alignm gaps (pig, cow):	95, 29