Cow genome map


           Conread name:
           rplac_6992.y1
        

               Conread position:
               71-352
               

               Cow position:
               chr1:31158157-31158433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               159, 13
               

               Conread position:
               79-350
               

               Cow position:
               chr1:49595448-49595729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               74, 59
               

               Conread position:
               79-352
               

               Cow position:
               chr1:87031961-87031683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               154, 80
               

               Conread position:
               79-354
               

               Cow position:
               chr1:90320464-90320741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               83-348
               

               Cow position:
               chr1:15917073-15916815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               156, 96
               

               Conread position:
               87-352
               

               Cow position:
               chr1:43226367-43226635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               143, 80
               

               Conread position:
               97-346
               

               Cow position:
               chr1:97432813-97432571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               132, 63
               

               Conread position:
               97-352
               

               Cow position:
               chr1:62137974-62138218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               103, 32
               

               Conread position:
               112-355
               

               Cow position:
               chr1:37556751-37556512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               122, 97
               

               Conread position:
               152-354
               

               Cow position:
               chr1:80960923-80960724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               44, 29
               
Show alignments to all cow chromosomes.