Cow genome map
| Conread name: | rplac_6992.y1 |
| Conread position: | 62-353 |
| Cow position: | chrX:519403-519128 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 160, 73 |
| Conread position: | 69-352 |
| Cow position: | chrX:16472056-16471785 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 70-352 |
| Cow position: | chrX:18798895-18799171 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 226, 97 |
| Conread position: | 78-352 |
| Cow position: | chrX:1394770-1394499 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 79-349 |
| Cow position: | chrX:27418835-27419098 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 117, 159 |
| Conread position: | 79-350 |
| Cow position: | chrX:29024607-29024333 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 165 |
| Conread position: | 79-356 |
| Cow position: | chrX:5807534-5807818 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 170, 112 |
| Conread position: | 81-350 |
| Cow position: | chrX:68176-67906 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 130 |
| Conread position: | 81-350 |
| Cow position: | chrX:22075768-22076034 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 108, 124 |
| Conread position: | 82-352 |
| Cow position: | chrX:21287518-21287786 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 178, 82 |
| Conread position: | 87-350 |
| Cow position: | chrX:11914701-11914442 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 113, 146 |
| Conread position: | 90-348 |
| Cow position: | chrX:26288541-26288796 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 110, 31 |
| Conread position: | 90-349 |
| Cow position: | chrX:16554255-16553999 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 163 |
| Conread position: | 90-352 |
| Cow position: | chrX:26339747-26340008 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 104, 39 |
| Conread position: | 96-350 |
| Cow position: | chrX:20655017-20654767 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 97-346 |
| Cow position: | chrX:46092292-46092541 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 97-350 |
| Cow position: | chrX:33673693-33673944 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 97-350 |
| Cow position: | chrX:38390689-38390938 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 42, 147 |
| Conread position: | 100-349 |
| Cow position: | chrX:29871312-29871559 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 45 |
| Conread position: | 100-350 |
| Cow position: | chrX:34461549-34461305 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 102-350 |
| Cow position: | chrX:14625918-14625678 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 55, 91 |
| Conread position: | 102-352 |
| Cow position: | chrX:30074912-30074670 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 113, 17 |
| Conread position: | 107-346 |
| Cow position: | chrX:6660608-6660367 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 128, 63 |
| Conread position: | 108-352 |
| Cow position: | chrX:20591111-20590860 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 49, 103 |
| Conread position: | 134-359 |
| Cow position: | chrX:18459354-18459577 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 12 |
| Conread position: | 140-355 |
| Cow position: | chrX:42141549-42141758 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 90, 106 |
Show alignments to all cow chromosomes.