Cow genome map
| Conread name: | rpldo0109_b3.y1 |
| Conread position: | 44-306 |
| Cow position: | chr10:20568471-20568721 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 79 |
| Conread position: | 59-260 |
| Cow position: | chr10:48389946-48389753 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 105, 53 |
| Conread position: | 59-274 |
| Cow position: | chr10:15318146-15318350 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 59-288 |
| Cow position: | chr10:66212024-66211806 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 59-359 |
| Cow position: | chr10:18885464-18885156 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 107, 61 |
| Conread position: | 59-384 |
| Cow position: | chr10:34661827-34661516 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 23 |
| Conread position: | 59-386 |
| Cow position: | chr10:60358218-60358536 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 115, 52 |
| Conread position: | 59-388 |
| Cow position: | chr10:29278944-29279247 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 77, 30 |
| Conread position: | 59-388 |
| Cow position: | chr10:53058187-53057856 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 62 |
| Conread position: | 59-389 |
| Cow position: | chr10:11247469-11247779 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 54 |
| Conread position: | 59-389 |
| Cow position: | chr10:24308404-24308096 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 59 |
| Conread position: | 59-392 |
| Cow position: | chr10:32093284-32093613 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 230, 43 |
| Conread position: | 60-299 |
| Cow position: | chr10:51288505-51288721 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 60-361 |
| Cow position: | chr10:41255408-41255110 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 76, 33 |
| Conread position: | 60-388 |
| Cow position: | chr10:52288085-52287756 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 79, 58 |
| Conread position: | 61-275 |
| Cow position: | chr10:1423208-1423010 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 61-376 |
| Cow position: | chr10:46378280-46377967 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 61-388 |
| Cow position: | chr10:10573346-10573658 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 42 |
| Conread position: | 61-388 |
| Cow position: | chr10:14189311-14189007 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 28 |
| Conread position: | 61-388 |
| Cow position: | chr10:29933029-29932702 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 61-388 |
| Cow position: | chr10:34662841-34662524 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 61-388 |
| Cow position: | chr10:38725160-38725465 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 57 |
| Conread position: | 61-388 |
| Cow position: | chr10:43451432-43451114 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 50 |
| Conread position: | 61-388 |
| Cow position: | chr10:46829366-46829680 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 57 |
| Conread position: | 61-389 |
| Cow position: | chr10:32928255-32928573 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 61-392 |
| Cow position: | chr10:24222678-24222362 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 16 |
| Conread position: | 61-392 |
| Cow position: | chr10:33084918-33084590 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 245 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 123, 52 |
| Conread position: | 61-392 |
| Cow position: | chr10:44681012-44681328 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 57 |
| Conread position: | 61-392 |
| Cow position: | chr10:58066643-58066324 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 59 |
| Conread position: | 62-285 |
| Cow position: | chr10:15292730-15292937 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 62-379 |
| Cow position: | chr10:4711127-4711426 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 50 |
| Conread position: | 62-386 |
| Cow position: | chr10:24972103-24971796 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 57 |
| Conread position: | 65-386 |
| Cow position: | chr10:53336905-53336600 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 36 |
| Conread position: | 65-388 |
| Cow position: | chr10:30281687-30281998 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 13 |
| Conread position: | 65-388 |
| Cow position: | chr10:30745899-30746206 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 55 |
| Conread position: | 66-292 |
| Cow position: | chr10:19093715-19093929 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 223, 35 |
| Conread position: | 70-388 |
| Cow position: | chr10:52278225-52278532 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 44 |
| Conread position: | 73-287 |
| Cow position: | chr10:34299989-34300184 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 73-392 |
| Cow position: | chr10:41396970-41397290 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 30 |
| Conread position: | 78-314 |
| Cow position: | chr10:46150084-46150306 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 211, 31 |
| Conread position: | 135-316 |
| Cow position: | chr10:60355626-60355802 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 135-392 |
| Cow position: | chr10:8403746-8404019 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 138-390 |
| Cow position: | chr10:47582553-47582807 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 25 |
Show alignments to all cow chromosomes.