Cow genome map
| Conread name: | rpldo0109_b3.y1 |
| Conread position: | 59-301 |
| Cow position: | chr11:49935304-49935073 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 105, 51 |
| Conread position: | 59-365 |
| Cow position: | chr11:34112744-34113062 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 42 |
| Conread position: | 59-388 |
| Cow position: | chr11:63157413-63157102 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 59-389 |
| Cow position: | chr11:31885009-31885332 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 15 |
| Conread position: | 59-392 |
| Cow position: | chr11:30171851-30172187 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 45, 76 |
| Conread position: | 59-392 |
| Cow position: | chr11:38638616-38638936 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 51 |
| Conread position: | 59-392 |
| Cow position: | chr11:58989994-58990326 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 63 |
| Conread position: | 60-392 |
| Cow position: | chr11:32749595-32749923 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 41 |
| Conread position: | 61-313 |
| Cow position: | chr11:67295562-67295312 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 78, 69 |
| Conread position: | 61-365 |
| Cow position: | chr11:75558549-75558257 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 61-382 |
| Cow position: | chr11:78819601-78819917 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 51 |
| Conread position: | 61-386 |
| Cow position: | chr11:44244633-44244291 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 61-392 |
| Cow position: | chr11:33350202-33349886 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 50 |
| Conread position: | 61-392 |
| Cow position: | chr11:47573089-47572759 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 66 |
| Conread position: | 61-392 |
| Cow position: | chr11:68571174-68570857 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 51 |
| Conread position: | 61-392 |
| Cow position: | chr11:72314038-72314361 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 57 |
| Conread position: | 65-372 |
| Cow position: | chr11:7873662-7873957 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 38 |
| Conread position: | 65-392 |
| Cow position: | chr11:64352222-64351905 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 66-388 |
| Cow position: | chr11:54134748-54134435 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 29 |
| Conread position: | 135-303 |
| Cow position: | chr11:17514653-17514817 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 135-388 |
| Cow position: | chr11:24030302-24030552 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 154, 195 |
Show alignments to all cow chromosomes.