Cow genome map
| Conread name: | rpldo0109_b3.y1 |
| Conread position: | 56-388 |
| Cow position: | chr13:26079924-26079606 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 45 |
| Conread position: | 56-392 |
| Cow position: | chr13:19396826-19396500 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 233, 70 |
| Conread position: | 59-274 |
| Cow position: | chr13:45072951-45073149 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 77, 16 |
| Conread position: | 59-297 |
| Cow position: | chr13:20465111-20465355 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 205 |
| Conread position: | 59-300 |
| Cow position: | chr13:40722213-40722443 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 107, 54 |
| Conread position: | 59-301 |
| Cow position: | chr13:53069979-53069743 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 108, 59 |
| Conread position: | 59-329 |
| Cow position: | chr13:24059860-24060112 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 249, 63 |
| Conread position: | 59-384 |
| Cow position: | chr13:17820792-17821099 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 58 |
| Conread position: | 59-384 |
| Cow position: | chr13:19426227-19426538 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 55 |
| Conread position: | 59-387 |
| Cow position: | chr13:19425436-19425744 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 59-388 |
| Cow position: | chr13:32825936-32826251 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 59 |
| Conread position: | 59-388 |
| Cow position: | chr13:37483793-37484114 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 53 |
| Conread position: | 59-389 |
| Cow position: | chr13:32836227-32835913 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 61-287 |
| Cow position: | chr13:3419426-3419207 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 103, 50 |
| Conread position: | 61-295 |
| Cow position: | chr13:22117071-22116853 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 228, 52 |
| Conread position: | 61-295 |
| Cow position: | chr13:24156337-24156119 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 228, 52 |
| Conread position: | 61-300 |
| Cow position: | chr13:11821789-11821561 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 61-313 |
| Cow position: | chr13:54094464-54094219 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 61-371 |
| Cow position: | chr13:36346472-36346165 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 66 |
| Conread position: | 61-379 |
| Cow position: | chr13:27984972-27985264 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 186, 13 |
| Conread position: | 61-388 |
| Cow position: | chr13:3480221-3479900 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 240, 61 |
| Conread position: | 61-392 |
| Cow position: | chr13:22571030-22570688 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 62, 40 |
| Conread position: | 62-287 |
| Cow position: | chr13:14063032-14063239 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 62-338 |
| Cow position: | chr13:4420778-4420516 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 227, 50 |
| Conread position: | 62-392 |
| Cow position: | chr13:60690249-60690571 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 56 |
| Conread position: | 65-299 |
| Cow position: | chr13:50063641-50063865 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 223, 53 |
| Conread position: | 65-390 |
| Cow position: | chr13:15869588-15869274 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 62 |
| Conread position: | 65-392 |
| Cow position: | chr13:6552943-6552625 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 55 |
| Conread position: | 65-392 |
| Cow position: | chr13:21235225-21235534 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 48 |
| Conread position: | 70-388 |
| Cow position: | chr13:25062878-25062566 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 48 |
| Conread position: | 73-392 |
| Cow position: | chr13:42277129-42277431 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 127, 37 |
| Conread position: | 74-275 |
| Cow position: | chr13:9587151-9587338 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 98-392 |
| Cow position: | chr13:50689948-50690241 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 132-360 |
| Cow position: | chr13:8651846-8652075 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 26 |
| Conread position: | 135-301 |
| Cow position: | chr13:17970590-17970757 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 135-390 |
| Cow position: | chr13:20243331-20243581 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 135-390 |
| Cow position: | chr13:36771015-36771271 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 23 |
| Conread position: | 136-329 |
| Cow position: | chr13:2839276-2839083 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 153, 136 |
| Conread position: | 136-388 |
| Cow position: | chr13:24754296-24754040 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 65 |
Show alignments to all cow chromosomes.