Cow genome map
| Conread name: | rpldo0109_b3.y1 |
| Conread position: | 46-388 |
| Cow position: | chr15:32226303-32226626 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 54 |
| Conread position: | 59-287 |
| Cow position: | chr15:16927476-16927689 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 125, 54 |
| Conread position: | 59-287 |
| Cow position: | chr15:21894392-21894182 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 59-297 |
| Cow position: | chr15:24993931-24994150 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 59-303 |
| Cow position: | chr15:19725139-19725370 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 59-360 |
| Cow position: | chr15:49258644-49258360 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 59-366 |
| Cow position: | chr15:608736-608446 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 54 |
| Conread position: | 59-388 |
| Cow position: | chr15:13285622-13285294 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 114, 43 |
| Conread position: | 59-388 |
| Cow position: | chr15:13669330-13669643 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 57 |
| Conread position: | 59-388 |
| Cow position: | chr15:35041296-35041610 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 111, 63 |
| Conread position: | 59-388 |
| Cow position: | chr15:39363435-39363756 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 107, 54 |
| Conread position: | 59-388 |
| Cow position: | chr15:41087289-41087602 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 63 |
| Conread position: | 59-392 |
| Cow position: | chr15:9870831-9871155 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 74 |
| Conread position: | 59-392 |
| Cow position: | chr15:30046962-30047284 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 42 |
| Conread position: | 61-303 |
| Cow position: | chr15:35824786-35825014 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 228, 53 |
| Conread position: | 61-311 |
| Cow position: | chr15:4817217-4817457 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 61-313 |
| Cow position: | chr15:39406533-39406296 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 51 |
| Conread position: | 61-375 |
| Cow position: | chr15:1776556-1776865 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 57 |
| Conread position: | 61-386 |
| Cow position: | chr15:45112138-45111819 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 71, 26 |
| Conread position: | 61-388 |
| Cow position: | chr15:20352415-20352093 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 50 |
| Conread position: | 61-392 |
| Cow position: | chr15:50302777-50302438 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 228, 40 |
| Conread position: | 65-313 |
| Cow position: | chr15:29811423-29811187 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 65-385 |
| Cow position: | chr15:21695604-21695910 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 55 |
| Conread position: | 65-392 |
| Cow position: | chr15:25666646-25666968 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 53 |
| Conread position: | 66-312 |
| Cow position: | chr15:38883773-38883538 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 66-313 |
| Cow position: | chr15:12723794-12723557 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 169, 29 |
| Conread position: | 67-392 |
| Cow position: | chr15:16112974-16112660 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 52 |
| Conread position: | 68-392 |
| Cow position: | chr15:23332298-23332626 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 255 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 75-388 |
| Cow position: | chr15:29910660-29910974 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 98, 47 |
| Conread position: | 135-372 |
| Cow position: | chr15:52148729-52148494 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 23 |
Show alignments to all cow chromosomes.