Cow genome map
| Conread name: | rpldo0109_b3.y1 |
| Conread position: | 42-363 |
| Cow position: | chr16:37474441-37474128 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 165, 74 |
| Conread position: | 58-388 |
| Cow position: | chr16:49230264-49229939 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 62 |
| Conread position: | 59-270 |
| Cow position: | chr16:41576265-41576460 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 59-389 |
| Cow position: | chr16:29205942-29205628 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 107, 54 |
| Conread position: | 59-392 |
| Cow position: | chr16:40561740-40562061 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 55 |
| Conread position: | 60-312 |
| Cow position: | chr16:45263840-45263595 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 43, 63 |
| Conread position: | 61-291 |
| Cow position: | chr16:46254205-46253976 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 102, 57 |
| Conread position: | 61-300 |
| Cow position: | chr16:53087074-53086846 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 103, 53 |
| Conread position: | 61-303 |
| Cow position: | chr16:11304607-11304366 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 71, 99 |
| Conread position: | 61-326 |
| Cow position: | chr16:33235721-33235472 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 61-335 |
| Cow position: | chr16:3111674-3111913 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 264, 62 |
| Conread position: | 61-371 |
| Cow position: | chr16:28922293-28922600 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 61-386 |
| Cow position: | chr16:25174282-25174582 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 61-388 |
| Cow position: | chr16:23563653-23563966 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 61 |
| Conread position: | 61-388 |
| Cow position: | chr16:48398727-48398417 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 61-392 |
| Cow position: | chr16:13698020-13698342 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 57 |
| Conread position: | 61-392 |
| Cow position: | chr16:32522726-32523046 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 61-392 |
| Cow position: | chr16:42970414-42970097 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 34 |
| Conread position: | 62-300 |
| Cow position: | chr16:27817893-27817658 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 6 |
| Conread position: | 62-392 |
| Cow position: | chr16:51043150-51043467 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 104, 50 |
| Conread position: | 65-287 |
| Cow position: | chr16:22810525-22810310 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 65-389 |
| Cow position: | chr16:56149830-56150139 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 53 |
| Conread position: | 65-392 |
| Cow position: | chr16:22158087-22157766 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 66-388 |
| Cow position: | chr16:13176917-13177228 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 50 |
| Conread position: | 128-385 |
| Cow position: | chr16:16425036-16424778 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 37 |
| Conread position: | 128-390 |
| Cow position: | chr16:49141987-49141727 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 30 |
| Conread position: | 135-387 |
| Cow position: | chr16:19643473-19643721 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 23 |
| Conread position: | 135-388 |
| Cow position: | chr16:42339780-42340034 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 147-392 |
| Cow position: | chr16:31159988-31159744 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 112 |
Show alignments to all cow chromosomes.