Cow genome map
| Conread name: | rpldo0109_b3.y1 |
| Conread position: | 42-362 |
| Cow position: | chr18:13877269-13876958 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 58-313 |
| Cow position: | chr18:12123471-12123215 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 103 |
| Conread position: | 59-255 |
| Cow position: | chr18:27457272-27457094 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 59-298 |
| Cow position: | chr18:25206815-25206592 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 230, 59 |
| Conread position: | 59-311 |
| Cow position: | chr18:1955042-1954805 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 61 |
| Conread position: | 59-319 |
| Cow position: | chr18:29759200-29759453 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 198, 59 |
| Conread position: | 59-336 |
| Cow position: | chr18:23682076-23681807 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 77, 41 |
| Conread position: | 59-376 |
| Cow position: | chr18:19193863-19193565 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 59-380 |
| Cow position: | chr18:48451156-48451458 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 51 |
| Conread position: | 59-388 |
| Cow position: | chr18:47183808-47183487 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 57 |
| Conread position: | 59-388 |
| Cow position: | chr18:50637980-50637666 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 59 |
| Conread position: | 59-392 |
| Cow position: | chr18:4182720-4182390 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 42 |
| Conread position: | 60-388 |
| Cow position: | chr18:40892735-40893088 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 76, 62 |
| Conread position: | 61-382 |
| Cow position: | chr18:26844172-26843857 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 228, 55 |
| Conread position: | 61-387 |
| Cow position: | chr18:33606115-33606428 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 62 |
| Conread position: | 61-388 |
| Cow position: | chr18:33756375-33756675 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 126, 59 |
| Conread position: | 61-389 |
| Cow position: | chr18:7964715-7965029 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 57 |
| Conread position: | 61-389 |
| Cow position: | chr18:37691112-37690813 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 61-392 |
| Cow position: | chr18:13292993-13293311 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 59 |
| Conread position: | 61-392 |
| Cow position: | chr18:50851853-50851524 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 219, 47 |
| Conread position: | 62-303 |
| Cow position: | chr18:36649207-36649438 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 116, 51 |
| Conread position: | 62-371 |
| Cow position: | chr18:27194332-27194623 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 62-388 |
| Cow position: | chr18:47314824-47314497 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 67 |
| Conread position: | 62-392 |
| Cow position: | chr18:35295046-35295365 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 62 |
| Conread position: | 63-292 |
| Cow position: | chr18:23137730-23137512 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 101, 55 |
| Conread position: | 65-388 |
| Cow position: | chr18:24021879-24022177 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 65-389 |
| Cow position: | chr18:38090097-38089771 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 207, 55 |
| Conread position: | 65-392 |
| Cow position: | chr18:55119358-55119679 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 61 |
| Conread position: | 66-382 |
| Cow position: | chr18:6878138-6877839 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 52 |
| Conread position: | 67-388 |
| Cow position: | chr18:28539909-28539589 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 63 |
| Conread position: | 67-392 |
| Cow position: | chr18:16378460-16378773 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 55 |
| Conread position: | 76-294 |
| Cow position: | chr18:44484554-44484352 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 135-303 |
| Cow position: | chr18:10890796-10890962 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 153, 28 |
| Conread position: | 135-360 |
| Cow position: | chr18:24267296-24267073 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 135-388 |
| Cow position: | chr18:6290325-6290580 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 70 |
| Conread position: | 135-392 |
| Cow position: | chr18:3179966-3180222 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 23 |
| Conread position: | 140-293 |
| Cow position: | chr18:30786397-30786243 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 149, 0 |
Show alignments to all cow chromosomes.