Cow genome map
| Conread name: | rpldo0109_b3.y1 |
| Conread position: | 40-311 |
| Cow position: | chr2:46058837-46058578 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 20, 77 |
| Conread position: | 58-382 |
| Cow position: | chr2:27338273-27337951 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 60 |
| Conread position: | 58-388 |
| Cow position: | chr2:27076212-27076546 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 50 |
| Conread position: | 59-297 |
| Cow position: | chr2:29802620-29802396 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 59-328 |
| Cow position: | chr2:19871975-19872237 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 232, 61 |
| Conread position: | 59-357 |
| Cow position: | chr2:45562969-45563252 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 54 |
| Conread position: | 59-382 |
| Cow position: | chr2:31457004-31457310 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 54 |
| Conread position: | 59-386 |
| Cow position: | chr2:56797734-56797412 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 77, 70 |
| Conread position: | 59-388 |
| Cow position: | chr2:4796272-4796597 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 74, 50 |
| Conread position: | 59-388 |
| Cow position: | chr2:16514302-16514620 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 61 |
| Conread position: | 59-392 |
| Cow position: | chr2:43473702-43474025 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 59 |
| Conread position: | 59-392 |
| Cow position: | chr2:43596653-43596336 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 61 |
| Conread position: | 59-392 |
| Cow position: | chr2:81927353-81927690 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 42 |
| Conread position: | 61-301 |
| Cow position: | chr2:1202662-1202887 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 75, 50 |
| Conread position: | 61-361 |
| Cow position: | chr2:44189686-44189974 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 61-379 |
| Cow position: | chr2:32659711-32660020 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 57 |
| Conread position: | 61-382 |
| Cow position: | chr2:56737845-56737522 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 243 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 228, 40 |
| Conread position: | 61-388 |
| Cow position: | chr2:30388895-30389218 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 112, 47 |
| Conread position: | 61-388 |
| Cow position: | chr2:36008061-36007755 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 61-392 |
| Cow position: | chr2:28611577-28611255 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 68 |
| Conread position: | 61-392 |
| Cow position: | chr2:51921289-51920963 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 61 |
| Conread position: | 61-392 |
| Cow position: | chr2:77281454-77281775 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 47 |
| Conread position: | 62-300 |
| Cow position: | chr2:42938873-42938649 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 172, 38 |
| Conread position: | 62-392 |
| Cow position: | chr2:24668656-24668991 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 150, 60 |
| Conread position: | 62-392 |
| Cow position: | chr2:64522552-64522222 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 72 |
| Conread position: | 65-392 |
| Cow position: | chr2:5297257-5297574 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 51 |
| Conread position: | 65-392 |
| Cow position: | chr2:45517921-45518235 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 57 |
| Conread position: | 66-388 |
| Cow position: | chr2:22081185-22081511 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 27, 57 |
| Conread position: | 75-392 |
| Cow position: | chr2:78744232-78744535 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 37 |
| Conread position: | 101-352 |
| Cow position: | chr2:29297003-29296761 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 188, 15 |
| Conread position: | 121-388 |
| Cow position: | chr2:76861987-76861712 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 218 |
| Conread position: | 135-388 |
| Cow position: | chr2:82270050-82270299 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 32 |
| Conread position: | 135-392 |
| Cow position: | chr2:306267-306013 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 24 |
Show alignments to all cow chromosomes.