Cow genome map
| Conread name: | rpldo0109_b3.y1 |
| Conread position: | 59-270 |
| Cow position: | chr21:31510925-31511137 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 54, 88 |
| Conread position: | 59-299 |
| Cow position: | chr21:44861684-44861452 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 40, 57 |
| Conread position: | 59-303 |
| Cow position: | chr21:6051055-6051289 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 100, 50 |
| Conread position: | 59-368 |
| Cow position: | chr21:16292993-16293306 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 85, 56 |
| Conread position: | 59-376 |
| Cow position: | chr21:3236107-3236411 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 230, 58 |
| Conread position: | 59-388 |
| Cow position: | chr21:23683120-23683447 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 63 |
| Conread position: | 59-388 |
| Cow position: | chr21:24887557-24887901 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 121, 16 |
| Conread position: | 59-388 |
| Cow position: | chr21:34391388-34391078 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 54 |
| Conread position: | 59-388 |
| Cow position: | chr21:36657147-36657466 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 107, 54 |
| Conread position: | 59-390 |
| Cow position: | chr21:30849359-30849045 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 218, 63 |
| Conread position: | 59-392 |
| Cow position: | chr21:18494545-18494863 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 72 |
| Conread position: | 59-392 |
| Cow position: | chr21:20549344-20549013 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 63 |
| Conread position: | 59-392 |
| Cow position: | chr21:24698055-24698388 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 105, 63 |
| Conread position: | 61-282 |
| Cow position: | chr21:20243713-20243503 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 38, 62 |
| Conread position: | 61-301 |
| Cow position: | chr21:12802203-12801975 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 118, 61 |
| Conread position: | 61-388 |
| Cow position: | chr21:18289244-18289555 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 57 |
| Conread position: | 61-388 |
| Cow position: | chr21:34738174-34738491 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 53 |
| Conread position: | 61-392 |
| Cow position: | chr21:7815153-7814813 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 35, 105 |
| Conread position: | 61-392 |
| Cow position: | chr21:33832068-33831752 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 328, 52 |
| Conread position: | 62-301 |
| Cow position: | chr21:13585538-13585315 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 33, 51 |
| Conread position: | 62-358 |
| Cow position: | chr21:363234-363518 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 50 |
| Conread position: | 62-388 |
| Cow position: | chr21:8126204-8125910 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 74, 45 |
| Conread position: | 64-392 |
| Cow position: | chr21:5455407-5455089 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 48 |
| Conread position: | 65-385 |
| Cow position: | chr21:23293570-23293267 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 55 |
| Conread position: | 65-392 |
| Cow position: | chr21:26633093-26632766 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 83, 57 |
| Conread position: | 67-388 |
| Cow position: | chr21:37942104-37941790 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 35, 56 |
| Conread position: | 69-388 |
| Cow position: | chr21:4998897-4998594 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 49 |
| Conread position: | 69-388 |
| Cow position: | chr21:28617189-28617480 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 73-346 |
| Cow position: | chr21:19237310-19237567 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 43 |
| Conread position: | 125-389 |
| Cow position: | chr21:42190526-42190275 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 33 |
| Conread position: | 135-379 |
| Cow position: | chr21:33579834-33580071 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 89, 32 |
| Conread position: | 135-388 |
| Cow position: | chr21:2366983-2367233 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 23 |
| Conread position: | 135-388 |
| Cow position: | chr21:26865084-26865335 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 154, 133 |
| Conread position: | 136-371 |
| Cow position: | chr21:13070221-13069984 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 152, 116 |
Show alignments to all cow chromosomes.