Cow genome map
| Conread name: | rpldo0109_b3.y1 |
| Conread position: | 58-300 |
| Cow position: | chr24:36729948-36730189 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 78, 65 |
| Conread position: | 58-388 |
| Cow position: | chr24:27754181-27754499 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 49 |
| Conread position: | 59-284 |
| Cow position: | chr24:31816044-31816251 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 59-301 |
| Cow position: | chr24:17833959-17833727 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 105, 55 |
| Conread position: | 59-331 |
| Cow position: | chr24:8886372-8886636 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 107, 59 |
| Conread position: | 59-337 |
| Cow position: | chr24:16897355-16897087 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 59 |
| Conread position: | 59-388 |
| Cow position: | chr24:6341652-6341975 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 70 |
| Conread position: | 60-392 |
| Cow position: | chr24:4616255-4615936 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 54 |
| Conread position: | 61-293 |
| Cow position: | chr24:28601239-28601022 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 228, 51 |
| Conread position: | 61-315 |
| Cow position: | chr24:34761330-34761568 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 228, 55 |
| Conread position: | 61-331 |
| Cow position: | chr24:36722222-36722478 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 61-379 |
| Cow position: | chr24:15372611-15372917 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 48 |
| Conread position: | 61-385 |
| Cow position: | chr24:3794305-3794619 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 61-388 |
| Cow position: | chr24:40056227-40055917 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 51 |
| Conread position: | 61-392 |
| Cow position: | chr24:7001576-7001258 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 57 |
| Conread position: | 61-392 |
| Cow position: | chr24:32609131-32609448 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 65-329 |
| Cow position: | chr24:29191110-29191359 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 223, 53 |
| Conread position: | 65-388 |
| Cow position: | chr24:36174279-36173978 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 65-392 |
| Cow position: | chr24:12198531-12198214 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 223, 36 |
| Conread position: | 135-295 |
| Cow position: | chr24:23695370-23695214 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 152, 23 |
| Conread position: | 135-300 |
| Cow position: | chr24:18331239-18331404 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 135-389 |
| Cow position: | chr24:6450086-6450320 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 135-392 |
| Cow position: | chr24:18742016-18741761 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 140-392 |
| Cow position: | chr24:38655537-38655282 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
Show alignments to all cow chromosomes.