Cow genome map


           Conread name:
           rpldo0109_b3.y1
        

               Conread position:
               58-300
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 65
               

               Conread position:
               58-388
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 49
               

               Conread position:
               59-284
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               59-301
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               105, 55
               

               Conread position:
               59-331
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               107, 59
               

               Conread position:
               59-337
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 59
               

               Conread position:
               59-388
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 70
               

               Conread position:
               60-392
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 54
               

               Conread position:
               61-293
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               228, 51
               

               Conread position:
               61-315
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               228, 55
               

               Conread position:
               61-331
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               61-379
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 48
               

               Conread position:
               61-385
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               75, 52
               

               Conread position:
               61-388
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 51
               

               Conread position:
               61-392
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 57
               

               Conread position:
               61-392
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               244
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               122, 28
               

               Conread position:
               65-329
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               223, 53
               

               Conread position:
               65-388
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               36, 56
               

               Conread position:
               65-392
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               223, 36
               

               Conread position:
               135-295
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               152, 23
               

               Conread position:
               135-300
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               135-389
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               135-392
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 23
               

               Conread position:
               140-392
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 0
               
Show alignments to all cow chromosomes.