Cow genome map
| Conread name: | rpldo0109_b3.y1 |
| Conread position: | 58-295 |
| Cow position: | chr29:23154737-23154956 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 126, 50 |
| Conread position: | 59-270 |
| Cow position: | chr29:40300454-40300259 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 59-297 |
| Cow position: | chr29:95066-94837 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 63 |
| Conread position: | 59-300 |
| Cow position: | chr29:29770973-29770747 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 77, 55 |
| Conread position: | 59-376 |
| Cow position: | chr29:6218069-6217731 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 59-384 |
| Cow position: | chr29:4875392-4875079 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 63 |
| Conread position: | 59-385 |
| Cow position: | chr29:24952178-24952509 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 150 |
| Conread position: | 59-388 |
| Cow position: | chr29:19761788-19762100 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 59 |
| Conread position: | 59-392 |
| Cow position: | chr29:24578366-24578712 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 227, 59 |
| Conread position: | 59-392 |
| Cow position: | chr29:38910496-38910171 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 61-388 |
| Cow position: | chr29:20254911-20255224 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 227, 57 |
| Conread position: | 61-392 |
| Cow position: | chr29:14116560-14116875 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 40 |
| Conread position: | 61-392 |
| Cow position: | chr29:17794927-17795253 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 224, 47 |
| Conread position: | 62-300 |
| Cow position: | chr29:14050697-14050475 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 227, 41 |
| Conread position: | 65-364 |
| Cow position: | chr29:33520477-33520186 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 71, 36 |
| Conread position: | 65-382 |
| Cow position: | chr29:24345946-24345642 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 53 |
| Conread position: | 65-388 |
| Cow position: | chr29:7960011-7959687 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 108, 56 |
| Conread position: | 65-392 |
| Cow position: | chr29:11136368-11136058 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 55 |
| Conread position: | 70-388 |
| Cow position: | chr29:19755971-19756276 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 52 |
| Conread position: | 135-288 |
| Cow position: | chr29:27858386-27858539 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 135-309 |
| Cow position: | chr29:34298171-34298003 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 135-388 |
| Cow position: | chr29:26017933-26017686 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 23 |
| Conread position: | 137-388 |
| Cow position: | chr29:5948218-5947959 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.