Cow genome map
| Conread name: | rpldo0109_b3.y1 |
| Conread position: | 37-313 |
| Cow position: | chr3:62883441-62883709 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 58-329 |
| Cow position: | chr3:2118111-2118385 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 63, 109 |
| Conread position: | 59-287 |
| Cow position: | chr3:39172020-39171801 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 105, 55 |
| Conread position: | 59-291 |
| Cow position: | chr3:39970408-39970192 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 77, 11 |
| Conread position: | 59-300 |
| Cow position: | chr3:4031407-4031634 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 230, 59 |
| Conread position: | 59-300 |
| Cow position: | chr3:73467073-73467306 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 230, 49 |
| Conread position: | 59-388 |
| Cow position: | chr3:5420384-5420060 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 63 |
| Conread position: | 59-388 |
| Cow position: | chr3:18393897-18393578 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 59-388 |
| Cow position: | chr3:26920387-26920702 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 40 |
| Conread position: | 59-388 |
| Cow position: | chr3:70566247-70565932 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 59 |
| Conread position: | 59-390 |
| Cow position: | chr3:8900903-8901228 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 55 |
| Conread position: | 59-390 |
| Cow position: | chr3:55010674-55010348 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 79, 63 |
| Conread position: | 59-392 |
| Cow position: | chr3:38497424-38497762 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 105, 53 |
| Conread position: | 60-300 |
| Cow position: | chr3:56400229-56400458 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 61-324 |
| Cow position: | chr3:3845349-3845095 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 244, 61 |
| Conread position: | 61-365 |
| Cow position: | chr3:56302147-56301840 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 61-385 |
| Cow position: | chr3:1831079-1830761 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 40 |
| Conread position: | 61-388 |
| Cow position: | chr3:11254653-11254344 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 52 |
| Conread position: | 61-388 |
| Cow position: | chr3:26554235-26553906 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 61-388 |
| Cow position: | chr3:27289417-27289743 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 61 |
| Conread position: | 61-392 |
| Cow position: | chr3:11410613-11410292 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 75, 49 |
| Conread position: | 61-392 |
| Cow position: | chr3:17100503-17100176 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 52 |
| Conread position: | 61-392 |
| Cow position: | chr3:23169577-23169259 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 57 |
| Conread position: | 61-392 |
| Cow position: | chr3:24350617-24350938 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 65-303 |
| Cow position: | chr3:33693117-33693343 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 98, 30 |
| Conread position: | 67-392 |
| Cow position: | chr3:9843073-9843394 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 53 |
| Conread position: | 76-388 |
| Cow position: | chr3:70130316-70130006 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 228, 45 |
| Conread position: | 135-246 |
| Cow position: | chr3:70894292-70894399 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 135-389 |
| Cow position: | chr3:47284391-47284644 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 45 |
Show alignments to all cow chromosomes.