Cow genome map
| Conread name: | rpldo0109_b3.y1 |
| Conread position: | 42-286 |
| Cow position: | chr6:28101001-28100751 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 45-270 |
| Cow position: | chr6:143818-143610 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 151, 35 |
| Conread position: | 58-386 |
| Cow position: | chr6:28476720-28477049 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 104, 64 |
| Conread position: | 59-300 |
| Cow position: | chr6:1096033-1095796 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 77, 42 |
| Conread position: | 59-346 |
| Cow position: | chr6:28156569-28156290 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 53 |
| Conread position: | 59-365 |
| Cow position: | chr6:119519-119824 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 184, 42 |
| Conread position: | 59-371 |
| Cow position: | chr6:33949461-33949144 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 72, 64 |
| Conread position: | 59-372 |
| Cow position: | chr6:58370121-58370430 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 59 |
| Conread position: | 59-379 |
| Cow position: | chr6:9733277-9732971 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 61 |
| Conread position: | 59-384 |
| Cow position: | chr6:10612411-10612731 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 108, 59 |
| Conread position: | 59-388 |
| Cow position: | chr6:36651978-36652288 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 108, 57 |
| Conread position: | 59-388 |
| Cow position: | chr6:46570680-46570987 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 57 |
| Conread position: | 59-392 |
| Cow position: | chr6:52478889-52478553 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 60 |
| Conread position: | 60-302 |
| Cow position: | chr6:26914654-26914877 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 61-269 |
| Cow position: | chr6:40760735-40760939 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 61-284 |
| Cow position: | chr6:32335135-32335356 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 74, 61 |
| Conread position: | 61-322 |
| Cow position: | chr6:46246539-46246304 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 228, 52 |
| Conread position: | 61-371 |
| Cow position: | chr6:24757792-24757496 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 59 |
| Conread position: | 61-388 |
| Cow position: | chr6:46292773-46292469 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 75, 39 |
| Conread position: | 61-388 |
| Cow position: | chr6:48872650-48872338 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 227, 57 |
| Conread position: | 61-392 |
| Cow position: | chr6:28791384-28791707 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 62-291 |
| Cow position: | chr6:17326727-17326509 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 104, 58 |
| Conread position: | 65-375 |
| Cow position: | chr6:33451531-33451822 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 53 |
| Conread position: | 66-316 |
| Cow position: | chr6:19695103-19695338 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 223, 54 |
| Conread position: | 67-322 |
| Cow position: | chr6:61136728-61136967 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 69-388 |
| Cow position: | chr6:38994083-38993772 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 67, 44 |
| Conread position: | 70-256 |
| Cow position: | chr6:28977484-28977312 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 70-388 |
| Cow position: | chr6:46465393-46465697 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 48 |
| Conread position: | 75-284 |
| Cow position: | chr6:50114417-50114609 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 75-388 |
| Cow position: | chr6:6944115-6943812 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 51 |
| Conread position: | 135-384 |
| Cow position: | chr6:60017691-60017934 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 192, 23 |
| Conread position: | 135-392 |
| Cow position: | chr6:62925382-62925119 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 97 |
| Conread position: | 136-389 |
| Cow position: | chr6:55205822-55205569 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 125 |
| Conread position: | 137-392 |
| Cow position: | chr6:39358715-39358467 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 19 |
Show alignments to all cow chromosomes.