Cow genome map
| Conread name: | rpldo0109_b3.y1 |
| Conread position: | 59-285 |
| Cow position: | chr8:14933174-14932966 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 59-387 |
| Cow position: | chr8:58636295-58636608 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 59 |
| Conread position: | 59-388 |
| Cow position: | chr8:12539077-12538757 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 45, 116 |
| Conread position: | 59-388 |
| Cow position: | chr8:18395255-18395570 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 104, 12 |
| Conread position: | 59-388 |
| Cow position: | chr8:24904823-24905147 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 35 |
| Conread position: | 59-392 |
| Cow position: | chr8:1303436-1303750 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 64 |
| Conread position: | 59-392 |
| Cow position: | chr8:12814368-12814686 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 30 |
| Conread position: | 61-311 |
| Cow position: | chr8:55026488-55026725 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 228, 53 |
| Conread position: | 61-313 |
| Cow position: | chr8:22058686-22058443 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 61-347 |
| Cow position: | chr8:39182521-39182248 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 47 |
| Conread position: | 61-371 |
| Cow position: | chr8:42556719-42556419 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 61-388 |
| Cow position: | chr8:4745378-4745060 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 61-392 |
| Cow position: | chr8:1999155-1999466 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 51 |
| Conread position: | 61-392 |
| Cow position: | chr8:35291246-35290924 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 234 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 227, 52 |
| Conread position: | 61-392 |
| Cow position: | chr8:45824405-45824742 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 61-392 |
| Cow position: | chr8:51861769-51862096 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 61-392 |
| Cow position: | chr8:55122925-55122609 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 51 |
| Conread position: | 62-299 |
| Cow position: | chr8:24868243-24868024 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 227, 58 |
| Conread position: | 62-312 |
| Cow position: | chr8:40744038-40743796 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 227, 51 |
| Conread position: | 65-365 |
| Cow position: | chr8:18404141-18404441 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 45, 69 |
| Conread position: | 65-376 |
| Cow position: | chr8:16143654-16143952 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 36 |
| Conread position: | 65-386 |
| Cow position: | chr8:21206418-21206715 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 123, 58 |
| Conread position: | 65-388 |
| Cow position: | chr8:27368623-27368940 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 108, 58 |
| Conread position: | 77-293 |
| Cow position: | chr8:16092791-16092993 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 212, 37 |
| Conread position: | 135-300 |
| Cow position: | chr8:11611838-11611999 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 154, 23 |
| Conread position: | 135-359 |
| Cow position: | chr8:42442773-42442996 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 135-385 |
| Cow position: | chr8:38464600-38464850 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 29 |
| Conread position: | 135-387 |
| Cow position: | chr8:6795043-6795285 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 90, 21 |
| Conread position: | 135-387 |
| Cow position: | chr8:25387548-25387802 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 135-392 |
| Cow position: | chr8:672942-673194 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 23 |
| Conread position: | 135-392 |
| Cow position: | chr8:52230119-52229866 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 24 |
| Conread position: | 135-392 |
| Cow position: | chr8:53429366-53429615 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 23 |
| Conread position: | 136-388 |
| Cow position: | chr8:18049193-18049442 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 22 |
Show alignments to all cow chromosomes.