Cow genome map

Conread name: rpliv0128_b16.y1

Conread position: 1-253
Cow position:
Alignm length: 260
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 120

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 189

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 189

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 190

Conread position: 1-256
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 89

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 189

Conread position: 1-256
Cow position:
Alignm length: 266
Alignm identity: 198
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 21, 187

Conread position: 1-265
Cow position:
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 69

Conread position: 1-272
Cow position:
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 185

Conread position: 2-141
Cow position:
Alignm length: 141
Alignm identity: 120
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 124, 38

Conread position: 2-171
Cow position:
Alignm length: 171
Alignm identity: 137
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 124, 44

Conread position: 2-184
Cow position:
Alignm length: 185
Alignm identity: 148
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 2-186
Cow position:
Alignm length: 186
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 82

Conread position: 2-187
Cow position:
Alignm length: 188
Alignm identity: 151
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 0

Conread position: 2-187
Cow position:
Alignm length: 188
Alignm identity: 146
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 2-189
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 35, 118

Conread position: 2-190
Cow position:
Alignm length: 190
Alignm identity: 150
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 34, 128

Conread position: 2-210
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 35, 188

Conread position: 2-236
Cow position:
Alignm length: 243
Alignm identity: 185
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 184

Conread position: 2-250
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 193

Conread position: 2-250
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 193

Conread position: 2-250
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 35, 60

Conread position: 2-251
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 2-251
Cow position:
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-251
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 188

Conread position: 2-253
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 35, 113

Conread position: 2-253
Cow position:
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 130

Conread position: 2-253
Cow position:
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 193

Conread position: 2-253
Cow position:
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-253
Cow position:
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-253
Cow position:
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 60

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 149

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 187
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 35, 50

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 104

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 99

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 78

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 68

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 82

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 195
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 96

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 215

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 115

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 12

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 125, 186

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 48

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 261
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 190
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 93, 52

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 197
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 207

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 154

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 125, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-257
Cow position:
Alignm length: 264
Alignm identity: 195
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 35, 92

Conread position: 2-265
Cow position:
Alignm length: 273
Alignm identity: 205
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 35, 15

Conread position: 2-265
Cow position:
Alignm length: 267
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 162

Conread position: 2-265
Cow position:
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-265
Cow position:
Alignm length: 267
Alignm identity: 193
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 124, 88

Conread position: 2-265
Cow position:
Alignm length: 269
Alignm identity: 197
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 34, 258

Conread position: 2-272
Cow position:
Alignm length: 280
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 2-272
Cow position:
Alignm length: 275
Alignm identity: 193
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 129, 33

Conread position: 2-290
Cow position:
Alignm length: 297
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 186

Conread position: 3-256
Cow position:
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 64

Conread position: 3-256
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 34, 95

Conread position: 3-256
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 34, 63

Conread position: 3-256
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 33, 76

Conread position: 3-256
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 3-256
Cow position:
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 54

Conread position: 3-256
Cow position:
Alignm length: 261
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 127

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 21

Conread position: 3-256
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 186

Conread position: 3-259
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 78

Conread position: 3-265
Cow position:
Alignm length: 275
Alignm identity: 204
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 40, 134

Conread position: 3-272
Cow position:
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 118

Conread position: 4-187
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 4-248
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 58

Conread position: 4-250
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 32, 147

Conread position: 4-256
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 24

Conread position: 4-256
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 33, 117

Conread position: 8-256
Cow position:
Alignm length: 249
Alignm identity: 168
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 183, 0

Conread position: 8-256
Cow position:
Alignm length: 252
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 8-256
Cow position:
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 82

Conread position: 8-265
Cow position:
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 141

Conread position: 9-253
Cow position:
Alignm length: 254
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 151

Conread position: 9-256
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 28, 54

Conread position: 9-256
Cow position:
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 178

Conread position: 15-256
Cow position:
Alignm length: 248
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 15-256
Cow position:
Alignm length: 247
Alignm identity: 186
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 199

Conread position: 15-256
Cow position:
Alignm length: 248
Alignm identity: 185
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 22, 179

Conread position: 16-256
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 110, 0

Conread position: 17-223
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 20, 9

Conread position: 17-256
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 73

Conread position: 18-256
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 19, 37

Conread position: 18-259
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 174

Conread position: 18-270
Cow position:
Alignm length: 265
Alignm identity: 180
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 52

Conread position: 18-302
Cow position:
Alignm length: 291
Alignm identity: 212
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 52

Conread position: 36-247
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 91, 153

Conread position: 44-210
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 145

Conread position: 44-247
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 107, 76

Conread position: 48-256
Cow position:
Alignm length: 216
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 144

Conread position: 59-165
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 65-252
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 65-256
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 61, 85

Conread position: 68-247
Cow position:
Alignm length: 187
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 121

Conread position: 74-256
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 135, 46

Conread position: 86-256
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 100-256
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 0

Show alignments to all cow chromosomes.