Cow genome map

Conread name: rpliv0128_b16.y1

Conread position: 1-168
Cow position:
Alignm length: 169
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 126

Conread position: 1-256
Cow position:
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 51

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 90

Conread position: 2-183
Cow position:
Alignm length: 184
Alignm identity: 149
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 0

Conread position: 2-187
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 49

Conread position: 2-190
Cow position:
Alignm length: 191
Alignm identity: 149
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 0

Conread position: 2-210
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 188

Conread position: 2-237
Cow position:
Alignm length: 244
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 188

Conread position: 2-246
Cow position:
Alignm length: 253
Alignm identity: 191
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 35, 188

Conread position: 2-249
Cow position:
Alignm length: 249
Alignm identity: 183
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 124, 202

Conread position: 2-250
Cow position:
Alignm length: 258
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 2-252
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 35, 56

Conread position: 2-253
Cow position:
Alignm length: 256
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 2-253
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 130, 38

Conread position: 2-253
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 35, 195

Conread position: 2-253
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 126, 64

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 79

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 82

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 60

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 124, 38

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 190

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 190

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 188
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 35, 119

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 266
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 83

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 10

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 187

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 2-256
Cow position:
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 209

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 199
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 11

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 180
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 35, 96

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 119

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 208

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 186

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 197
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 188
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 56

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 184

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 162

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 188

Conread position: 2-258
Cow position:
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-265
Cow position:
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 2-265
Cow position:
Alignm length: 274
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 164

Conread position: 2-265
Cow position:
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 88

Conread position: 2-270
Cow position:
Alignm length: 271
Alignm identity: 194
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 211, 34

Conread position: 2-270
Cow position:
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 184

Conread position: 2-275
Cow position:
Alignm length: 285
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 158

Conread position: 2-275
Cow position:
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 96

Conread position: 2-276
Cow position:
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 3-170
Cow position:
Alignm length: 171
Alignm identity: 142
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 3-174
Cow position:
Alignm length: 174
Alignm identity: 144
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 0

Conread position: 3-223
Cow position:
Alignm length: 228
Alignm identity: 178
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 41

Conread position: 3-252
Cow position:
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 124

Conread position: 3-253
Cow position:
Alignm length: 253
Alignm identity: 192
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 26, 49

Conread position: 3-256
Cow position:
Alignm length: 258
Alignm identity: 188
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 34, 78

Conread position: 3-256
Cow position:
Alignm length: 256
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 173

Conread position: 3-256
Cow position:
Alignm length: 265
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 44

Conread position: 3-256
Cow position:
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 70

Conread position: 3-263
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 64

Conread position: 3-265
Cow position:
Alignm length: 266
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 255

Conread position: 3-265
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 124, 34

Conread position: 3-270
Cow position:
Alignm length: 276
Alignm identity: 205
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 209, 93

Conread position: 3-270
Cow position:
Alignm length: 272
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 131

Conread position: 3-302
Cow position:
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 18

Conread position: 4-256
Cow position:
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 62

Conread position: 4-256
Cow position:
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 5-265
Cow position:
Alignm length: 264
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 117

Conread position: 8-256
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 91

Conread position: 9-190
Cow position:
Alignm length: 182
Alignm identity: 145
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 9-252
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 30, 149

Conread position: 9-256
Cow position:
Alignm length: 250
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 184

Conread position: 9-256
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 28, 86

Conread position: 10-253
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 116, 87

Conread position: 10-256
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 10-256
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 31

Conread position: 12-190
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 84

Conread position: 14-256
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 48

Conread position: 14-256
Cow position:
Alignm length: 250
Alignm identity: 192
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 115, 10

Conread position: 15-253
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 32

Conread position: 15-256
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 135

Conread position: 15-256
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 47

Conread position: 15-256
Cow position:
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 130

Conread position: 15-270
Cow position:
Alignm length: 264
Alignm identity: 193
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 21, 176

Conread position: 16-252
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 21, 123

Conread position: 17-256
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 20, 45

Conread position: 17-256
Cow position:
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 174

Conread position: 17-256
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 149

Conread position: 17-256
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 40

Conread position: 17-265
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 22, 130

Conread position: 18-210
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 32

Conread position: 18-253
Cow position:
Alignm length: 240
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 123

Conread position: 18-256
Cow position:
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 147

Conread position: 18-256
Cow position:
Alignm length: 244
Alignm identity: 179
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 19, 40

Conread position: 19-247
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 175

Conread position: 22-256
Cow position:
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 11

Conread position: 23-256
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 40

Conread position: 25-253
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 108, 26

Conread position: 26-246
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 136

Conread position: 37-249
Cow position:
Alignm length: 219
Alignm identity: 149
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 175, 103

Conread position: 46-256
Cow position:
Alignm length: 218
Alignm identity: 168
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 80, 142

Conread position: 53-182
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 59-256
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 104, 57

Conread position: 69-256
Cow position:
Alignm length: 195
Alignm identity: 146
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 58, 123

Conread position: 90-256
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 99

Conread position: 101-256
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.