Cow genome map

Conread name: rpliv0128_b16.y1

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 10, 6

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 185

Conread position: 1-256
Cow position:
Alignm length: 265
Alignm identity: 199
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 191

Conread position: 1-266
Cow position:
Alignm length: 274
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 166

Conread position: 2-184
Cow position:
Alignm length: 185
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-186
Cow position:
Alignm length: 187
Alignm identity: 149
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 2-234
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 93

Conread position: 2-239
Cow position:
Alignm length: 245
Alignm identity: 181
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 2-245
Cow position:
Alignm length: 252
Alignm identity: 194
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 24

Conread position: 2-250
Cow position:
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-252
Cow position:
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 159

Conread position: 2-252
Cow position:
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 192

Conread position: 2-253
Cow position:
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 130

Conread position: 2-253
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 96

Conread position: 2-253
Cow position:
Alignm length: 261
Alignm identity: 198
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 9, 194

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-256
Cow position:
Alignm length: 261
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 35, 93

Conread position: 2-256
Cow position:
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 106

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 24

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 185

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 148

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 125, 140

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 215

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 189

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 128

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 172

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 59

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 119

Conread position: 2-256
Cow position:
Alignm length: 271
Alignm identity: 199
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 35, 197

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 193

Conread position: 2-256
Cow position:
Alignm length: 266
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 188

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 125

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 172
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 7

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 33, 56

Conread position: 2-258
Cow position:
Alignm length: 266
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 2-265
Cow position:
Alignm length: 272
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 190

Conread position: 2-265
Cow position:
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 256

Conread position: 2-265
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 35, 154

Conread position: 2-265
Cow position:
Alignm length: 271
Alignm identity: 202
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 35, 127

Conread position: 2-265
Cow position:
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-270
Cow position:
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 125

Conread position: 2-270
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 35, 63

Conread position: 2-302
Cow position:
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 125

Conread position: 3-187
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 47

Conread position: 3-239
Cow position:
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 36

Conread position: 3-242
Cow position:
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 117

Conread position: 3-252
Cow position:
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 187

Conread position: 3-253
Cow position:
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 3-253
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 65

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 188

Conread position: 3-256
Cow position:
Alignm length: 261
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 128

Conread position: 3-256
Cow position:
Alignm length: 260
Alignm identity: 186
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 35, 187

Conread position: 3-256
Cow position:
Alignm length: 263
Alignm identity: 197
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 78

Conread position: 3-256
Cow position:
Alignm length: 256
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 109

Conread position: 3-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 190

Conread position: 3-256
Cow position:
Alignm length: 261
Alignm identity: 196
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 189

Conread position: 3-256
Cow position:
Alignm length: 274
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 154

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 157

Conread position: 3-257
Cow position:
Alignm length: 258
Alignm identity: 189
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 34, 55

Conread position: 3-257
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 34, 97

Conread position: 3-265
Cow position:
Alignm length: 271
Alignm identity: 204
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 49

Conread position: 3-265
Cow position:
Alignm length: 285
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 197

Conread position: 3-265
Cow position:
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 256

Conread position: 3-265
Cow position:
Alignm length: 267
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 241

Conread position: 3-266
Cow position:
Alignm length: 279
Alignm identity: 207
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 35, 50

Conread position: 3-267
Cow position:
Alignm length: 269
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 140

Conread position: 4-238
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 33, 0

Conread position: 4-256
Cow position:
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 59

Conread position: 4-256
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 85

Conread position: 4-256
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 191

Conread position: 4-283
Cow position:
Alignm length: 290
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 44

Conread position: 8-252
Cow position:
Alignm length: 254
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 29, 50

Conread position: 8-256
Cow position:
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 119

Conread position: 9-253
Cow position:
Alignm length: 253
Alignm identity: 193
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 28, 107

Conread position: 9-257
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 118

Conread position: 10-187
Cow position:
Alignm length: 180
Alignm identity: 144
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 0

Conread position: 12-265
Cow position:
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 119

Conread position: 13-256
Cow position:
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 119

Conread position: 14-155
Cow position:
Alignm length: 142
Alignm identity: 121
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 14-256
Cow position:
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 179

Conread position: 14-265
Cow position:
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 178

Conread position: 15-181
Cow position:
Alignm length: 169
Alignm identity: 137
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 23, 43

Conread position: 15-256
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 21, 0

Conread position: 15-256
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 46

Conread position: 15-256
Cow position:
Alignm length: 250
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 178

Conread position: 16-256
Cow position:
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 16-256
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 149

Conread position: 17-189
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 110, 20

Conread position: 17-249
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 20, 147

Conread position: 17-256
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 138

Conread position: 18-256
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 18, 74

Conread position: 18-256
Cow position:
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 171

Conread position: 18-256
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 17, 55

Conread position: 21-256
Cow position:
Alignm length: 242
Alignm identity: 162
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 154

Conread position: 25-253
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 164

Conread position: 35-256
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 66, 156

Conread position: 46-256
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 44

Conread position: 59-256
Cow position:
Alignm length: 204
Alignm identity: 155
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 153, 109

Conread position: 68-265
Cow position:
Alignm length: 203
Alignm identity: 159
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 58, 121

Conread position: 81-250
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 83-256
Cow position:
Alignm length: 181
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 106

Conread position: 89-252
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 15

Conread position: 96-253
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 97-256
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 30, 93

Conread position: 97-265
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 60

Conread position: 102-256
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 59

Conread position: 110-272
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 75

Show alignments to all cow chromosomes.