Cow genome map
| Conread name: | rpliv0128_b16.y1 |
| Conread position: | 1-253 |
| Cow position: | chr21:19627107-19627363 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 189 |
| Conread position: | 1-256 |
| Cow position: | chr21:1196137-1195880 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 1-256 |
| Cow position: | chr21:4586077-4586336 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 232 |
| Conread position: | 1-256 |
| Cow position: | chr21:8071499-8071755 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-270 |
| Cow position: | chr21:5009869-5010142 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 226 |
| Conread position: | 1-272 |
| Cow position: | chr21:26699069-26699348 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 2-183 |
| Cow position: | chr21:42558374-42558191 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 149 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-186 |
| Cow position: | chr21:26628368-26628182 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 152 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-187 |
| Cow position: | chr21:9208909-9208726 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 35, 107 |
| Conread position: | 2-210 |
| Cow position: | chr21:36892632-36892838 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 2-210 |
| Cow position: | chr21:47532333-47532128 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 2-239 |
| Cow position: | chr21:4079621-4079383 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 186 |
| Conread position: | 2-246 |
| Cow position: | chr21:23329743-23329990 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 2-250 |
| Cow position: | chr21:27065999-27066251 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-250 |
| Cow position: | chr21:48530771-48530516 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 33, 147 |
| Conread position: | 2-252 |
| Cow position: | chr21:33316766-33317020 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 189 |
| Conread position: | 2-253 |
| Cow position: | chr21:17144288-17144033 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 2-253 |
| Cow position: | chr21:27147952-27148207 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 2-253 |
| Cow position: | chr21:33934314-33934560 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 2-256 |
| Cow position: | chr21:43301-43058 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 2-256 |
| Cow position: | chr21:149747-149489 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 184 |
| Conread position: | 2-256 |
| Cow position: | chr21:2768243-2768501 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 35, 90 |
| Conread position: | 2-256 |
| Cow position: | chr21:3766170-3766428 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 188 |
| Conread position: | 2-256 |
| Cow position: | chr21:3782372-3782115 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 45 |
| Conread position: | 2-256 |
| Cow position: | chr21:4719220-4719478 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 2-256 |
| Cow position: | chr21:4812744-4812995 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 35, 125 |
| Conread position: | 2-256 |
| Cow position: | chr21:4898364-4898622 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 2-256 |
| Cow position: | chr21:5642237-5642494 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 189 |
| Conread position: | 2-256 |
| Cow position: | chr21:6965872-6966130 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 2-256 |
| Cow position: | chr21:7047582-7047837 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 2-256 |
| Cow position: | chr21:10570887-10570629 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 2-256 |
| Cow position: | chr21:10853865-10853607 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 189 |
| Conread position: | 2-256 |
| Cow position: | chr21:11144250-11144508 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 189 |
| Conread position: | 2-256 |
| Cow position: | chr21:14534213-14533955 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 189 |
| Conread position: | 2-256 |
| Cow position: | chr21:16890240-16890500 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-256 |
| Cow position: | chr21:23341251-23340993 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 189 |
| Conread position: | 2-256 |
| Cow position: | chr21:24887244-24886992 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 34, 195 |
| Conread position: | 2-256 |
| Cow position: | chr21:25190252-25189992 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 30, 192 |
| Conread position: | 2-256 |
| Cow position: | chr21:25987014-25986759 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 230 |
| Conread position: | 2-256 |
| Cow position: | chr21:26400169-26400422 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 35, 148 |
| Conread position: | 2-256 |
| Cow position: | chr21:26633630-26633887 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-256 |
| Cow position: | chr21:26757123-26757381 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-256 |
| Cow position: | chr21:26875191-26874934 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 114 |
| Conread position: | 2-256 |
| Cow position: | chr21:27287576-27287321 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 184 |
| Conread position: | 2-256 |
| Cow position: | chr21:27375706-27375448 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 2-256 |
| Cow position: | chr21:27608102-27608358 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 184 |
| Conread position: | 2-256 |
| Cow position: | chr21:27619911-27620158 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 125, 26 |
| Conread position: | 2-256 |
| Cow position: | chr21:28915376-28915633 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 88 |
| Conread position: | 2-256 |
| Cow position: | chr21:29500138-29499880 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-256 |
| Cow position: | chr21:30565345-30565096 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 171 |
| Conread position: | 2-256 |
| Cow position: | chr21:30595490-30595748 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-256 |
| Cow position: | chr21:30627483-30627737 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 64 |
| Conread position: | 2-256 |
| Cow position: | chr21:30966343-30966601 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 2-256 |
| Cow position: | chr21:31512671-31512928 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 106 |
| Conread position: | 2-256 |
| Cow position: | chr21:32237939-32237681 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 189 |
| Conread position: | 2-256 |
| Cow position: | chr21:32773535-32773277 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 189 |
| Conread position: | 2-256 |
| Cow position: | chr21:33832376-33832637 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-256 |
| Cow position: | chr21:34823776-34823518 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 189 |
| Conread position: | 2-256 |
| Cow position: | chr21:34900074-34900332 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 2-256 |
| Cow position: | chr21:36376581-36376332 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 35, 61 |
| Conread position: | 2-256 |
| Cow position: | chr21:36506239-36506496 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 95 |
| Conread position: | 2-256 |
| Cow position: | chr21:37923776-37923529 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 35, 153 |
| Conread position: | 2-256 |
| Cow position: | chr21:38866012-38866270 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 189 |
| Conread position: | 2-256 |
| Cow position: | chr21:39059730-39059977 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 2-256 |
| Cow position: | chr21:39417675-39417419 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 34, 107 |
| Conread position: | 2-256 |
| Cow position: | chr21:39429002-39428744 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 188 |
| Conread position: | 2-256 |
| Cow position: | chr21:41796125-41796379 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 119 |
| Conread position: | 2-256 |
| Cow position: | chr21:42917393-42917135 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 2-256 |
| Cow position: | chr21:47428943-47428685 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 192 |
| Conread position: | 2-256 |
| Cow position: | chr21:47648942-47648682 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 2-256 |
| Cow position: | chr21:48273597-48273855 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 2-256 |
| Cow position: | chr21:49655583-49655841 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 161 |
| Conread position: | 2-257 |
| Cow position: | chr21:2537559-2537816 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 35, 61 |
| Conread position: | 2-257 |
| Cow position: | chr21:28881268-28881014 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 41, 191 |
| Conread position: | 2-257 |
| Cow position: | chr21:33728707-33728449 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 183 |
| Conread position: | 2-257 |
| Cow position: | chr21:43403838-43404096 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 144 |
| Conread position: | 2-265 |
| Cow position: | chr21:45302-45037 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 124, 91 |
| Conread position: | 2-265 |
| Cow position: | chr21:2878240-2878503 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 191 |
| Conread position: | 2-265 |
| Cow position: | chr21:19351261-19351527 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 2-265 |
| Cow position: | chr21:20244000-20244266 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 185 |
| Conread position: | 2-265 |
| Cow position: | chr21:28259261-28259004 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 33, 113 |
| Conread position: | 2-265 |
| Cow position: | chr21:33257156-33256890 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 257 |
| Conread position: | 2-265 |
| Cow position: | chr21:33709900-33710165 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 190 |
| Conread position: | 2-265 |
| Cow position: | chr21:47977867-47977601 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 191 |
| Conread position: | 2-270 |
| Cow position: | chr21:36534608-36534882 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 270 |
| Conread position: | 2-271 |
| Cow position: | chr21:39470164-39470435 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 189 |
| Conread position: | 3-164 |
| Cow position: | chr21:21216876-21217037 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 34, 110 |
| Conread position: | 3-189 |
| Cow position: | chr21:13704412-13704600 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-190 |
| Cow position: | chr21:1058061-1057872 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-190 |
| Cow position: | chr21:28810988-28811173 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 34, 118 |
| Conread position: | 3-210 |
| Cow position: | chr21:18819034-18819242 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 3-253 |
| Cow position: | chr21:6765424-6765680 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 3-253 |
| Cow position: | chr21:17478670-17478421 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 124, 183 |
| Conread position: | 3-253 |
| Cow position: | chr21:18931773-18931524 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 123, 186 |
| Conread position: | 3-253 |
| Cow position: | chr21:22316123-22315876 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 122, 81 |
| Conread position: | 3-253 |
| Cow position: | chr21:31275941-31275689 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 34, 114 |
| Conread position: | 3-256 |
| Cow position: | chr21:2905194-2905447 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 34, 101 |
| Conread position: | 3-256 |
| Cow position: | chr21:4189141-4188879 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 33, 193 |
| Conread position: | 3-256 |
| Cow position: | chr21:9895956-9895704 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 140 |
| Conread position: | 3-256 |
| Cow position: | chr21:11509540-11509283 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 3-256 |
| Cow position: | chr21:13302794-13302548 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 3-256 |
| Cow position: | chr21:18285404-18285148 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 5 |
| Conread position: | 3-256 |
| Cow position: | chr21:20910832-20911083 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 3-256 |
| Cow position: | chr21:22719502-22719755 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 35, 54 |
| Conread position: | 3-256 |
| Cow position: | chr21:28598189-28597934 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 34, 129 |
| Conread position: | 3-256 |
| Cow position: | chr21:29423660-29423405 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 3-270 |
| Cow position: | chr21:12153417-12153150 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 123, 32 |
| Conread position: | 3-270 |
| Cow position: | chr21:34657589-34657323 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 139 |
| Conread position: | 3-270 |
| Cow position: | chr21:37298739-37298472 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 34, 190 |
| Conread position: | 3-271 |
| Cow position: | chr21:470892-470621 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 40, 110 |
| Conread position: | 3-272 |
| Cow position: | chr21:15546094-15546365 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 76 |
| Conread position: | 3-302 |
| Cow position: | chr21:2419793-2419490 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 79 |
| Conread position: | 3-405 |
| Cow position: | chr21:28476892-28476490 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 33 |
| Conread position: | 4-247 |
| Cow position: | chr21:17418039-17418286 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 5 |
| Conread position: | 4-249 |
| Cow position: | chr21:17413012-17413257 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 4-256 |
| Cow position: | chr21:6623411-6623156 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 156 |
| Conread position: | 4-256 |
| Cow position: | chr21:32534419-32534171 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 139 |
| Conread position: | 4-258 |
| Cow position: | chr21:36163688-36163949 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 5-187 |
| Cow position: | chr21:1284350-1284533 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 32, 146 |
| Conread position: | 5-247 |
| Cow position: | chr21:48234723-48234952 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 8-270 |
| Cow position: | chr21:16277995-16277731 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 9-252 |
| Cow position: | chr21:15274933-15274688 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 153 |
| Conread position: | 9-256 |
| Cow position: | chr21:2514444-2514193 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 182 |
| Conread position: | 9-256 |
| Cow position: | chr21:5020739-5020488 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 181 |
| Conread position: | 9-256 |
| Cow position: | chr21:11405287-11405538 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 181 |
| Conread position: | 9-256 |
| Cow position: | chr21:32396433-32396682 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 10-256 |
| Cow position: | chr21:13300411-13300171 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 12-252 |
| Cow position: | chr21:27125128-27125372 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 178 |
| Conread position: | 14-258 |
| Cow position: | chr21:4035692-4035921 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 23, 139 |
| Conread position: | 15-256 |
| Cow position: | chr21:25598260-25598015 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 15-265 |
| Cow position: | chr21:48291768-48292017 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 22, 136 |
| Conread position: | 17-252 |
| Cow position: | chr21:45782147-45782379 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 124 |
| Conread position: | 18-187 |
| Cow position: | chr21:13090206-13090368 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 18-210 |
| Cow position: | chr21:36892872-36893063 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 5, 173 |
| Conread position: | 18-253 |
| Cow position: | chr21:17415255-17415488 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 116, 51 |
| Conread position: | 18-256 |
| Cow position: | chr21:32203816-32203582 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 18-257 |
| Cow position: | chr21:46974149-46974389 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 99 |
| Conread position: | 28-256 |
| Cow position: | chr21:13315016-13314792 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 182, 6 |
| Conread position: | 33-265 |
| Cow position: | chr21:3804213-3804446 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 93, 109 |
| Conread position: | 34-256 |
| Cow position: | chr21:2664598-2664823 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 94, 154 |
| Conread position: | 35-256 |
| Cow position: | chr21:19099013-19098792 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 126 |
| Conread position: | 36-256 |
| Cow position: | chr21:3046900-3046681 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 90, 20 |
| Conread position: | 38-256 |
| Cow position: | chr21:8617645-8617856 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 89, 108 |
| Conread position: | 49-256 |
| Cow position: | chr21:34684597-34684391 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 163, 71 |
| Conread position: | 58-272 |
| Cow position: | chr21:7155929-7155716 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 69, 148 |
| Conread position: | 59-256 |
| Cow position: | chr21:34255036-34255236 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 37, 111 |
| Conread position: | 70-265 |
| Cow position: | chr21:33965188-33965385 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 56, 188 |
| Conread position: | 81-256 |
| Cow position: | chr21:15398651-15398475 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 131, 13 |
| Conread position: | 81-256 |
| Cow position: | chr21:34180578-34180755 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 128, 107 |
| Conread position: | 104-256 |
| Cow position: | chr21:449666-449510 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 24, 86 |
| Conread position: | 108-256 |
| Cow position: | chr21:48638777-48638929 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 78 |
Show alignments to all cow chromosomes.