Cow genome map

Conread name: rpliv0128_b16.y1

Conread position: 1-183
Cow position:
Alignm length: 185
Alignm identity: 151
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 60

Conread position: 1-256
Cow position:
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 61

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 190

Conread position: 2-187
Cow position:
Alignm length: 188
Alignm identity: 146
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 2-220
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 132

Conread position: 2-235
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 35, 0

Conread position: 2-249
Cow position:
Alignm length: 253
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 2-250
Cow position:
Alignm length: 266
Alignm identity: 194
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 35, 93

Conread position: 2-252
Cow position:
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-252
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 80

Conread position: 2-253
Cow position:
Alignm length: 254
Alignm identity: 170
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 83

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 185

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 119

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 89

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 89

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 119

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 191

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 193
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 35, 187

Conread position: 2-256
Cow position:
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 124

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 35, 56

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 269
Alignm identity: 197
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 35, 195

Conread position: 2-256
Cow position:
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 119

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 61

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 170

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 60

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 176
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 91

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 89

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 119

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 129

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 199
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 181

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 45

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 104

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 188
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 33, 119

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-265
Cow position:
Alignm length: 270
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 89

Conread position: 2-265
Cow position:
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 257

Conread position: 2-265
Cow position:
Alignm length: 272
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-270
Cow position:
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 2-272
Cow position:
Alignm length: 274
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 238

Conread position: 2-276
Cow position:
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 93

Conread position: 3-233
Cow position:
Alignm length: 239
Alignm identity: 188
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 34, 101

Conread position: 3-253
Cow position:
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 47

Conread position: 3-256
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 51

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 195
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 34, 188

Conread position: 3-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 173

Conread position: 3-256
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 3-263
Cow position:
Alignm length: 267
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 181

Conread position: 3-271
Cow position:
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 55

Conread position: 4-252
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 186

Conread position: 4-252
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 0

Conread position: 4-253
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 33, 78

Conread position: 4-256
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 80

Conread position: 4-256
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 190

Conread position: 4-256
Cow position:
Alignm length: 261
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 117

Conread position: 5-244
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 121, 32

Conread position: 8-187
Cow position:
Alignm length: 182
Alignm identity: 144
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 59

Conread position: 8-256
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 29, 158

Conread position: 8-302
Cow position:
Alignm length: 312
Alignm identity: 215
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 29, 53

Conread position: 9-253
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 0

Conread position: 9-256
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 122

Conread position: 14-256
Cow position:
Alignm length: 246
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 14-256
Cow position:
Alignm length: 249
Alignm identity: 187
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 23, 106

Conread position: 15-253
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 130, 21

Conread position: 15-257
Cow position:
Alignm length: 253
Alignm identity: 194
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 24, 56

Conread position: 15-275
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 76, 25

Conread position: 16-256
Cow position:
Alignm length: 249
Alignm identity: 184
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 42

Conread position: 17-256
Cow position:
Alignm length: 243
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 115

Conread position: 17-256
Cow position:
Alignm length: 243
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 40

Conread position: 17-265
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 20, 143

Conread position: 24-252
Cow position:
Alignm length: 243
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 59

Conread position: 26-256
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 11, 165

Conread position: 26-257
Cow position:
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 161

Conread position: 59-256
Cow position:
Alignm length: 205
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 67, 131

Conread position: 68-253
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 124, 48

Conread position: 70-256
Cow position:
Alignm length: 195
Alignm identity: 152
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 57, 9

Conread position: 73-256
Cow position:
Alignm length: 191
Alignm identity: 147
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 54, 117

Conread position: 84-256
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 106

Conread position: 93-256
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 67

Conread position: 102-256
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 88

Show alignments to all cow chromosomes.