Cow genome map

Conread name: rpliv0128_b16.y1

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 184

Conread position: 1-256
Cow position:
Alignm length: 275
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 200

Conread position: 1-256
Cow position:
Alignm length: 263
Alignm identity: 197
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 61

Conread position: 1-256
Cow position:
Alignm length: 265
Alignm identity: 200
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 35, 191

Conread position: 1-256
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 36, 68

Conread position: 2-183
Cow position:
Alignm length: 184
Alignm identity: 147
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 2-187
Cow position:
Alignm length: 188
Alignm identity: 147
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 0

Conread position: 2-237
Cow position:
Alignm length: 242
Alignm identity: 185
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 34, 184

Conread position: 2-246
Cow position:
Alignm length: 253
Alignm identity: 189
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 35, 191

Conread position: 2-247
Cow position:
Alignm length: 253
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-252
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-253
Cow position:
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-253
Cow position:
Alignm length: 260
Alignm identity: 191
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 35, 189

Conread position: 2-253
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 78

Conread position: 2-253
Cow position:
Alignm length: 260
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 32

Conread position: 2-253
Cow position:
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 193

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 78

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 23

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 187

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 45

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 42, 205

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 192
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 35, 64

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 189
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 96

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 5, 192

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 189

Conread position: 2-256
Cow position:
Alignm length: 269
Alignm identity: 204
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 188

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 92

Conread position: 2-256
Cow position:
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 184

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 22

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 114

Conread position: 2-256
Cow position:
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 194

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 35, 186

Conread position: 2-256
Cow position:
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 147

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 191
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 172

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 35, 71

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 172

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 187

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 184

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 96

Conread position: 2-257
Cow position:
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 110

Conread position: 2-265
Cow position:
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 49

Conread position: 2-265
Cow position:
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-265
Cow position:
Alignm length: 266
Alignm identity: 198
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 35, 98

Conread position: 2-265
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 205

Conread position: 2-265
Cow position:
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 191

Conread position: 2-270
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 49

Conread position: 2-270
Cow position:
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-271
Cow position:
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-275
Cow position:
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 87

Conread position: 2-314
Cow position:
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 3-150
Cow position:
Alignm length: 149
Alignm identity: 127
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 34, 59

Conread position: 3-187
Cow position:
Alignm length: 187
Alignm identity: 150
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 34, 0

Conread position: 3-250
Cow position:
Alignm length: 250
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 118

Conread position: 3-253
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 159

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 187

Conread position: 3-256
Cow position:
Alignm length: 264
Alignm identity: 184
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 33, 150

Conread position: 3-256
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 72

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 47

Conread position: 3-256
Cow position:
Alignm length: 257
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 106

Conread position: 3-256
Cow position:
Alignm length: 258
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 60

Conread position: 3-256
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 95

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 187

Conread position: 3-256
Cow position:
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 54

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 188

Conread position: 3-256
Cow position:
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 191

Conread position: 3-256
Cow position:
Alignm length: 260
Alignm identity: 189
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 32, 60

Conread position: 3-262
Cow position:
Alignm length: 265
Alignm identity: 188
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 67

Conread position: 4-252
Cow position:
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 123

Conread position: 4-256
Cow position:
Alignm length: 257
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 4-257
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 33, 252

Conread position: 4-265
Cow position:
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 185

Conread position: 8-252
Cow position:
Alignm length: 248
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 8-253
Cow position:
Alignm length: 249
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 77

Conread position: 9-256
Cow position:
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 64

Conread position: 9-256
Cow position:
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 181

Conread position: 13-251
Cow position:
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 49

Conread position: 15-249
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 43

Conread position: 15-256
Cow position:
Alignm length: 245
Alignm identity: 181
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 41, 0

Conread position: 15-256
Cow position:
Alignm length: 244
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 34

Conread position: 15-274
Cow position:
Alignm length: 264
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 65

Conread position: 17-257
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 73

Conread position: 18-252
Cow position:
Alignm length: 239
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 73

Conread position: 18-256
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 19, 40

Conread position: 18-256
Cow position:
Alignm length: 255
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 45

Conread position: 18-256
Cow position:
Alignm length: 248
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 170

Conread position: 19-250
Cow position:
Alignm length: 236
Alignm identity: 170
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 18, 33

Conread position: 19-253
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 84

Conread position: 25-256
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 12, 154

Conread position: 27-251
Cow position:
Alignm length: 233
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 163

Conread position: 59-256
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 68, 130

Conread position: 65-183
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 69-253
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 110

Conread position: 91-265
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 167

Conread position: 92-265
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 98-256
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 91

Conread position: 102-256
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 88

Show alignments to all cow chromosomes.