Cow genome map

Conread name: rpliv0128_b16.y1

Conread position: 1-256
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 84

Conread position: 1-256
Cow position:
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 2-183
Cow position:
Alignm length: 183
Alignm identity: 146
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 2-239
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 34, 125

Conread position: 2-253
Cow position:
Alignm length: 258
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 56

Conread position: 2-253
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 105

Conread position: 2-253
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 102

Conread position: 2-254
Cow position:
Alignm length: 261
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 50

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 79

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 171

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 197
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 35, 19

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 66

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 197
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 36, 190

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 48

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 130

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 172

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 114

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 24

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 191

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 197
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 42, 23

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 189
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 197
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 35, 48

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 190

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 114

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-257
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-258
Cow position:
Alignm length: 264
Alignm identity: 198
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 35, 125

Conread position: 2-265
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 191

Conread position: 2-265
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 83

Conread position: 2-265
Cow position:
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-265
Cow position:
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-268
Cow position:
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 191

Conread position: 2-270
Cow position:
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 73

Conread position: 2-270
Cow position:
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 60

Conread position: 2-271
Cow position:
Alignm length: 274
Alignm identity: 198
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 35, 131

Conread position: 2-272
Cow position:
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-272
Cow position:
Alignm length: 282
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 99

Conread position: 2-272
Cow position:
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 185

Conread position: 2-275
Cow position:
Alignm length: 285
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-304
Cow position:
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 185

Conread position: 3-239
Cow position:
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 192

Conread position: 3-247
Cow position:
Alignm length: 249
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 131, 186

Conread position: 3-249
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 72

Conread position: 3-253
Cow position:
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 192

Conread position: 3-256
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 3-256
Cow position:
Alignm length: 256
Alignm identity: 195
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 128

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 187

Conread position: 3-256
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 142

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 63

Conread position: 3-256
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 3-256
Cow position:
Alignm length: 269
Alignm identity: 198
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 34, 0

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 92

Conread position: 3-256
Cow position:
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 93

Conread position: 3-257
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 63

Conread position: 3-257
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 123, 28

Conread position: 3-265
Cow position:
Alignm length: 271
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 190

Conread position: 3-265
Cow position:
Alignm length: 272
Alignm identity: 201
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 34, 60

Conread position: 3-270
Cow position:
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 25

Conread position: 3-294
Cow position:
Alignm length: 300
Alignm identity: 219
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 37, 124

Conread position: 4-256
Cow position:
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 4-270
Cow position:
Alignm length: 277
Alignm identity: 206
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 93

Conread position: 6-183
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 20, 39

Conread position: 8-256
Cow position:
Alignm length: 252
Alignm identity: 185
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 18, 185

Conread position: 8-256
Cow position:
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 182

Conread position: 8-256
Cow position:
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 183

Conread position: 8-265
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 29, 55

Conread position: 9-233
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 18, 151

Conread position: 9-252
Cow position:
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 177

Conread position: 9-256
Cow position:
Alignm length: 250
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 9-256
Cow position:
Alignm length: 250
Alignm identity: 185
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 27, 73

Conread position: 9-256
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 28, 90

Conread position: 9-256
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 27, 32

Conread position: 9-257
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 142

Conread position: 9-257
Cow position:
Alignm length: 254
Alignm identity: 188
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 27, 112

Conread position: 9-270
Cow position:
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 81

Conread position: 9-274
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 47, 146

Conread position: 10-256
Cow position:
Alignm length: 256
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 164

Conread position: 14-256
Cow position:
Alignm length: 247
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 15-252
Cow position:
Alignm length: 242
Alignm identity: 180
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 22, 137

Conread position: 15-257
Cow position:
Alignm length: 247
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 21, 134

Conread position: 18-253
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 183

Conread position: 18-253
Cow position:
Alignm length: 243
Alignm identity: 187
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 20, 40

Conread position: 18-256
Cow position:
Alignm length: 243
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 44

Conread position: 19-256
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 18, 102

Conread position: 28-272
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 185, 39

Conread position: 54-256
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 72, 29

Conread position: 59-256
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 68, 131

Conread position: 63-265
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 88

Conread position: 65-190
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 104

Conread position: 81-256
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 46, 107

Conread position: 92-256
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 35, 98

Show alignments to all cow chromosomes.