Cow genome map

Conread name: rpliv0128_b16.y1

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 174

Conread position: 1-256
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 190

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 190

Conread position: 1-270
Cow position:
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 190

Conread position: 2-183
Cow position:
Alignm length: 185
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 2-186
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 2-187
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 128

Conread position: 2-210
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 188

Conread position: 2-210
Cow position:
Alignm length: 211
Alignm identity: 166
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 35, 188

Conread position: 2-239
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 35, 76

Conread position: 2-248
Cow position:
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-250
Cow position:
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 189

Conread position: 2-252
Cow position:
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 2-252
Cow position:
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 190

Conread position: 2-253
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 59

Conread position: 2-253
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 125, 34

Conread position: 2-253
Cow position:
Alignm length: 255
Alignm identity: 186
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 46, 127

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 194
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 35, 51

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 35, 49

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 197
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 135

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 194
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 198
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 35, 88

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 168

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 93

Conread position: 2-256
Cow position:
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 261
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 48

Conread position: 2-256
Cow position:
Alignm length: 266
Alignm identity: 201
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 35, 112

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 138

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 21

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 119

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 190

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 198
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 35, 73

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 198
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 36, 144

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 32

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 59

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 155, 7

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 151

Conread position: 2-261
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 33, 24

Conread position: 2-265
Cow position:
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 190

Conread position: 2-265
Cow position:
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 2-270
Cow position:
Alignm length: 276
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-270
Cow position:
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 187

Conread position: 2-270
Cow position:
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 3-252
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 54

Conread position: 3-254
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 139

Conread position: 3-256
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 54

Conread position: 3-256
Cow position:
Alignm length: 272
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 33

Conread position: 3-256
Cow position:
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 62

Conread position: 3-256
Cow position:
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 128

Conread position: 3-265
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 124, 71

Conread position: 3-272
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 32, 40

Conread position: 4-253
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 39, 52

Conread position: 4-256
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 54

Conread position: 4-256
Cow position:
Alignm length: 255
Alignm identity: 186
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 33, 0

Conread position: 4-256
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 142

Conread position: 6-253
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 31, 93

Conread position: 8-253
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 55

Conread position: 8-256
Cow position:
Alignm length: 253
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 228

Conread position: 8-256
Cow position:
Alignm length: 252
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 88

Conread position: 14-238
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 76

Conread position: 15-252
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 21, 150

Conread position: 17-256
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 17-256
Cow position:
Alignm length: 241
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 211

Conread position: 18-256
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 19, 38

Conread position: 18-256
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 19, 111

Conread position: 18-265
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 20, 174

Conread position: 43-256
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 169, 83

Conread position: 47-256
Cow position:
Alignm length: 212
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 147, 0

Conread position: 47-256
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 162, 73

Conread position: 51-271
Cow position:
Alignm length: 235
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 68, 146

Conread position: 83-256
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 52

Conread position: 84-256
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 110

Conread position: 85-265
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 41, 70

Conread position: 104-256
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 86

Conread position: 106-265
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 86

Show alignments to all cow chromosomes.