Cow genome map

Conread name: rpliv0128_b16.y1

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 185

Conread position: 1-257
Cow position:
Alignm length: 265
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 13

Conread position: 1-265
Cow position:
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-183
Cow position:
Alignm length: 183
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 2-186
Cow position:
Alignm length: 188
Alignm identity: 145
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 0

Conread position: 2-187
Cow position:
Alignm length: 188
Alignm identity: 150
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 2-252
Cow position:
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 184

Conread position: 2-253
Cow position:
Alignm length: 256
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 55

Conread position: 2-253
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 88

Conread position: 2-253
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 156

Conread position: 2-253
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 35, 73

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 88

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 35, 96

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 188

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 188
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 35, 196

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 185

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 124, 22

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 186

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 199
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 35, 119

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 61

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 48

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 184

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 184

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 99

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 175

Conread position: 2-256
Cow position:
Alignm length: 269
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 174

Conread position: 2-256
Cow position:
Alignm length: 272
Alignm identity: 202
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 35, 198

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 109

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-258
Cow position:
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 65

Conread position: 2-265
Cow position:
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-265
Cow position:
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 172

Conread position: 2-272
Cow position:
Alignm length: 282
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 190

Conread position: 2-274
Cow position:
Alignm length: 278
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 119

Conread position: 2-279
Cow position:
Alignm length: 286
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 60

Conread position: 2-295
Cow position:
Alignm length: 305
Alignm identity: 220
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 125

Conread position: 3-184
Cow position:
Alignm length: 184
Alignm identity: 146
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 0

Conread position: 3-190
Cow position:
Alignm length: 191
Alignm identity: 147
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 45, 18

Conread position: 3-252
Cow position:
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 3-256
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 55

Conread position: 3-256
Cow position:
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 189

Conread position: 3-256
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 192

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 187

Conread position: 3-256
Cow position:
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 54

Conread position: 3-256
Cow position:
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 31

Conread position: 3-256
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 138

Conread position: 3-256
Cow position:
Alignm length: 258
Alignm identity: 179
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 82

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 204
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 60

Conread position: 3-259
Cow position:
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 155

Conread position: 3-272
Cow position:
Alignm length: 280
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 188

Conread position: 4-256
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 5-186
Cow position:
Alignm length: 183
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 8-253
Cow position:
Alignm length: 254
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 82

Conread position: 8-256
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 31, 58

Conread position: 8-256
Cow position:
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 185

Conread position: 9-256
Cow position:
Alignm length: 252
Alignm identity: 187
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 187

Conread position: 9-256
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 81

Conread position: 9-274
Cow position:
Alignm length: 274
Alignm identity: 198
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 137

Conread position: 13-256
Cow position:
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 100

Conread position: 14-256
Cow position:
Alignm length: 255
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 181

Conread position: 14-256
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 129

Conread position: 14-257
Cow position:
Alignm length: 251
Alignm identity: 186
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 21, 76

Conread position: 15-251
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 89

Conread position: 15-256
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 18-253
Cow position:
Alignm length: 239
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 30

Conread position: 18-256
Cow position:
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 175

Conread position: 23-270
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 186, 13

Conread position: 26-256
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 11, 65

Conread position: 46-249
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 122

Conread position: 63-273
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 63, 126

Conread position: 74-252
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 7

Conread position: 74-272
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 29

Conread position: 86-256
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 103

Show alignments to all cow chromosomes.