Cow genome map

Conread name: rpliv0128_b16.y1

Conread position: 1-189
Cow position:
Alignm length: 191
Alignm identity: 146
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 36, 62

Conread position: 1-253
Cow position:
Alignm length: 261
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 192

Conread position: 1-253
Cow position:
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 131

Conread position: 1-253
Cow position:
Alignm length: 261
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 52

Conread position: 1-256
Cow position:
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 74

Conread position: 1-256
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 185

Conread position: 1-256
Cow position:
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 191

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 31

Conread position: 2-183
Cow position:
Alignm length: 184
Alignm identity: 145
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 0

Conread position: 2-183
Cow position:
Alignm length: 184
Alignm identity: 143
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 35, 66

Conread position: 2-186
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 125, 77

Conread position: 2-186
Cow position:
Alignm length: 187
Alignm identity: 149
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 2-187
Cow position:
Alignm length: 188
Alignm identity: 149
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 2-187
Cow position:
Alignm length: 188
Alignm identity: 149
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 2-235
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 149

Conread position: 2-237
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 136

Conread position: 2-247
Cow position:
Alignm length: 254
Alignm identity: 192
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 188

Conread position: 2-247
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 168

Conread position: 2-253
Cow position:
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 2-253
Cow position:
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-253
Cow position:
Alignm length: 260
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-253
Cow position:
Alignm length: 260
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 60

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 198
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 96

Conread position: 2-256
Cow position:
Alignm length: 261
Alignm identity: 191
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 35, 92

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 35, 198

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 76

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 193

Conread position: 2-256
Cow position:
Alignm length: 261
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 191

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 197
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 187

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 93

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 174

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 208

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 198
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 15, 190

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 217

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 207

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 64

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 36, 125

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 132

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 184

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 160

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 239

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 169

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 73

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 190

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 191

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 96

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 157

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 214

Conread position: 2-265
Cow position:
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-265
Cow position:
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 2-272
Cow position:
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-272
Cow position:
Alignm length: 274
Alignm identity: 198
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 35, 108

Conread position: 2-274
Cow position:
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-298
Cow position:
Alignm length: 303
Alignm identity: 188
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 0

Conread position: 3-181
Cow position:
Alignm length: 181
Alignm identity: 144
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 34, 0

Conread position: 3-189
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 124

Conread position: 3-252
Cow position:
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 72

Conread position: 3-252
Cow position:
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 190

Conread position: 3-253
Cow position:
Alignm length: 260
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 190

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 187
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 3-254
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 124, 10

Conread position: 3-256
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 3-256
Cow position:
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 3-256
Cow position:
Alignm length: 261
Alignm identity: 197
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 34, 86

Conread position: 3-256
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 190

Conread position: 3-256
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 123, 33

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 3-256
Cow position:
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 188

Conread position: 3-265
Cow position:
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 190

Conread position: 3-265
Cow position:
Alignm length: 268
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 257

Conread position: 3-279
Cow position:
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 145

Conread position: 4-256
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 46

Conread position: 4-256
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 33, 0

Conread position: 4-272
Cow position:
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 48

Conread position: 8-253
Cow position:
Alignm length: 249
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 22

Conread position: 9-232
Cow position:
Alignm length: 232
Alignm identity: 179
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 28, 82

Conread position: 9-256
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 64

Conread position: 9-256
Cow position:
Alignm length: 255
Alignm identity: 194
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 96

Conread position: 9-256
Cow position:
Alignm length: 252
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 10-256
Cow position:
Alignm length: 255
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 181

Conread position: 14-256
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 162

Conread position: 14-256
Cow position:
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 15-256
Cow position:
Alignm length: 251
Alignm identity: 187
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 22, 151

Conread position: 15-256
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 48

Conread position: 15-256
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 32

Conread position: 16-253
Cow position:
Alignm length: 239
Alignm identity: 182
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 21, 111

Conread position: 17-272
Cow position:
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 177

Conread position: 18-252
Cow position:
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 14

Conread position: 18-256
Cow position:
Alignm length: 244
Alignm identity: 184
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 20-256
Cow position:
Alignm length: 242
Alignm identity: 161
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 16, 127

Conread position: 34-256
Cow position:
Alignm length: 227
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 93, 55

Conread position: 36-256
Cow position:
Alignm length: 228
Alignm identity: 174
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 90, 154

Conread position: 37-256
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 153

Conread position: 57-274
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 137, 74

Conread position: 65-256
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 61, 16

Conread position: 69-245
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 107

Conread position: 71-256
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 103, 0

Conread position: 74-256
Cow position:
Alignm length: 190
Alignm identity: 145
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 68, 16

Conread position: 81-256
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 88-275
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 58

Conread position: 104-256
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 86

Show alignments to all cow chromosomes.