Cow genome map

Conread name: rpliv0128_b16.y1

Conread position: 1-253
Cow position:
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 193

Conread position: 1-253
Cow position:
Alignm length: 261
Alignm identity: 194
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 190

Conread position: 1-253
Cow position:
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 67

Conread position: 2-190
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 35, 77

Conread position: 2-210
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 99

Conread position: 2-210
Cow position:
Alignm length: 211
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-231
Cow position:
Alignm length: 238
Alignm identity: 182
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 35, 191

Conread position: 2-239
Cow position:
Alignm length: 246
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 188

Conread position: 2-248
Cow position:
Alignm length: 255
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 184

Conread position: 2-249
Cow position:
Alignm length: 254
Alignm identity: 191
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 35, 189

Conread position: 2-249
Cow position:
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 60

Conread position: 2-250
Cow position:
Alignm length: 252
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-253
Cow position:
Alignm length: 258
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 93

Conread position: 2-253
Cow position:
Alignm length: 260
Alignm identity: 197
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 35, 89

Conread position: 2-253
Cow position:
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-253
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-253
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 77

Conread position: 2-253
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 2-256
Cow position:
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 184

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 191

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 96

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 36, 71

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 49

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 179

Conread position: 2-256
Cow position:
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 184

Conread position: 2-256
Cow position:
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-256
Cow position:
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 33, 184

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 184

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 124

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 93

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 184

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 194
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 120

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 153

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 36, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 173

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 104

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 186

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 71

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 189

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 193

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 42

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 190

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 119

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 184

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 119

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 46

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 61

Conread position: 2-256
Cow position:
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 188
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 66

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 2-257
Cow position:
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 2-257
Cow position:
Alignm length: 264
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 2-264
Cow position:
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 2-266
Cow position:
Alignm length: 270
Alignm identity: 198
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 36, 73

Conread position: 2-275
Cow position:
Alignm length: 280
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 269

Conread position: 2-275
Cow position:
Alignm length: 286
Alignm identity: 208
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 191

Conread position: 3-189
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 123, 140

Conread position: 3-241
Cow position:
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 187

Conread position: 3-253
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 186

Conread position: 3-253
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 187

Conread position: 3-256
Cow position:
Alignm length: 261
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 35, 125

Conread position: 3-256
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 49

Conread position: 3-256
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 127

Conread position: 3-256
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-256
Cow position:
Alignm length: 259
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 3-256
Cow position:
Alignm length: 258
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 55

Conread position: 3-256
Cow position:
Alignm length: 260
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 65

Conread position: 3-256
Cow position:
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 187

Conread position: 3-256
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 123, 33

Conread position: 3-256
Cow position:
Alignm length: 259
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 144

Conread position: 3-256
Cow position:
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 31

Conread position: 3-265
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 155

Conread position: 3-273
Cow position:
Alignm length: 275
Alignm identity: 191
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 78

Conread position: 3-291
Cow position:
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 165

Conread position: 4-235
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 193, 20

Conread position: 4-256
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 33, 184

Conread position: 4-256
Cow position:
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 187

Conread position: 5-256
Cow position:
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 165

Conread position: 6-253
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 120, 152

Conread position: 8-185
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 143

Conread position: 8-252
Cow position:
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 82

Conread position: 8-257
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 29, 183

Conread position: 9-247
Cow position:
Alignm length: 244
Alignm identity: 184
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 0

Conread position: 9-253
Cow position:
Alignm length: 248
Alignm identity: 188
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 81

Conread position: 9-256
Cow position:
Alignm length: 249
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 118

Conread position: 9-256
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 28, 79

Conread position: 9-256
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 112

Conread position: 10-253
Cow position:
Alignm length: 249
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 111

Conread position: 10-256
Cow position:
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 81

Conread position: 15-233
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 37

Conread position: 15-268
Cow position:
Alignm length: 265
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 14, 129

Conread position: 15-271
Cow position:
Alignm length: 261
Alignm identity: 192
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 22, 150

Conread position: 17-250
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 46

Conread position: 18-256
Cow position:
Alignm length: 247
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 77

Conread position: 26-265
Cow position:
Alignm length: 243
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 25

Conread position: 28-252
Cow position:
Alignm length: 227
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 29-256
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 0

Conread position: 46-247
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 164, 111

Conread position: 53-256
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 73, 16

Conread position: 57-253
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 60-256
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 138, 14

Conread position: 62-252
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 42

Conread position: 63-239
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 126

Conread position: 68-265
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 89

Conread position: 83-256
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 44, 107

Conread position: 89-252
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.