Cow genome map


           Conread name:
           rplun0138_e5.y1
        

               Conread position:
               155-410
               

               Cow position:
               chr1:74746209-74746455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               167, 26
               

               Conread position:
               157-404
               

               Cow position:
               chr1:57179883-57180133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               40, 93
               

               Conread position:
               158-391
               

               Cow position:
               chr1:68832801-68833039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               158-398
               

               Cow position:
               chr1:95549327-95549082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               34, 167
               

               Conread position:
               159-410
               

               Cow position:
               chr1:20062815-20062559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               38, 70
               

               Conread position:
               160-397
               

               Cow position:
               chr1:93189913-93190152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 102
               

               Conread position:
               160-410
               

               Cow position:
               chr1:22159536-22159775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               162-406
               

               Cow position:
               chr1:15748232-15747978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               34, 183
               

               Conread position:
               176-410
               

               Cow position:
               chr1:33990326-33990566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               232-410
               

               Cow position:
               chr1:40492740-40492558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               37, 0
               
Show alignments to all cow chromosomes.