Cow genome map
| Conread name: | rplun0138_k1.y1 |
| Conread position: | 1-129 |
| Cow position: | chr11:53431961-53432087 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-134 |
| Cow position: | chr11:12350960-12351096 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 1-134 |
| Cow position: | chr11:19102381-19102512 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-134 |
| Cow position: | chr11:85393706-85393837 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-136 |
| Cow position: | chr11:4027458-4027594 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-139 |
| Cow position: | chr11:11988212-11988076 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-139 |
| Cow position: | chr11:12358319-12358456 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-139 |
| Cow position: | chr11:23877408-23877271 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 1-139 |
| Cow position: | chr11:24393424-24393286 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-139 |
| Cow position: | chr11:30125140-30125279 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 117, 38 |
| Conread position: | 1-139 |
| Cow position: | chr11:38835326-38835462 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-139 |
| Cow position: | chr11:41170588-41170723 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-139 |
| Cow position: | chr11:44157148-44157284 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr11:4270756-4270897 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr11:10847547-10847406 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr11:26124823-26124967 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 43, 32 |
| Conread position: | 1-140 |
| Cow position: | chr11:44251898-44251763 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr11:58134492-58134351 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-143 |
| Cow position: | chr11:67450596-67450454 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 1-151 |
| Cow position: | chr11:43514531-43514675 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-166 |
| Cow position: | chr11:84389732-84389568 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 1-171 |
| Cow position: | chr11:62229293-62229129 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 1-214 |
| Cow position: | chr11:28063946-28063721 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 1-214 |
| Cow position: | chr11:59369921-59369700 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 109, 33 |
| Conread position: | 1-215 |
| Cow position: | chr11:30124314-30124542 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 118, 199 |
| Conread position: | 1-216 |
| Cow position: | chr11:10090781-10090551 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 1-216 |
| Cow position: | chr11:52885945-52886166 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 102, 10 |
| Conread position: | 1-218 |
| Cow position: | chr11:39802547-39802319 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 100, 33 |
| Conread position: | 3-145 |
| Cow position: | chr11:31874673-31874812 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 111, 31 |
| Conread position: | 4-141 |
| Cow position: | chr11:37065013-37065148 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 5-140 |
| Cow position: | chr11:8887058-8887194 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 29 |
| Conread position: | 5-141 |
| Cow position: | chr11:256085-256224 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 109, 29 |
| Conread position: | 5-141 |
| Cow position: | chr11:30305349-30305215 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 109, 29 |
| Conread position: | 7-192 |
| Cow position: | chr11:66727472-66727274 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 243-465 |
| Cow position: | chr11:65161216-65161448 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 243-476 |
| Cow position: | chr11:81852195-81852437 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 243-505 |
| Cow position: | chr11:42429532-42429265 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 27, 56 |
| Conread position: | 243-509 |
| Cow position: | chr11:10050907-10050639 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 79, 35 |
| Conread position: | 276-509 |
| Cow position: | chr11:43733162-43732926 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 104 |
| Conread position: | 282-509 |
| Cow position: | chr11:3240788-3240559 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 111, 28 |
| Conread position: | 283-470 |
| Cow position: | chr11:39802178-39801986 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 291-490 |
| Cow position: | chr11:28049441-28049646 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 6 |
| Conread position: | 366-509 |
| Cow position: | chr11:8283149-8283003 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 73 |
| Conread position: | 368-504 |
| Cow position: | chr11:30124964-30125106 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
Show alignments to all cow chromosomes.