Cow genome map


           Conread name:
           rplun0138_k1.y1
        

               Conread position:
               1-129
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-134
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-135
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               126, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 28
               

               Conread position:
               1-141
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               120, 33
               

               Conread position:
               1-141
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               127, 33
               

               Conread position:
               1-142
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-143
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 89
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               1-509
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               2-208
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               91, 32
               

               Conread position:
               2-216
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               117, 28
               

               Conread position:
               3-133
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               84, 31
               

               Conread position:
               4-133
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-133
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-509
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               350
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               11-201
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               108, 23
               

               Conread position:
               26-216
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               100, 8
               

               Conread position:
               35-216
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               84, 21
               

               Conread position:
               74-506
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               300
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               46, 91
               

               Conread position:
               243-457
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 75
               

               Conread position:
               243-505
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               243-509
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 231
               

               Conread position:
               257-465
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               189, 159
               

               Conread position:
               281-508
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               164, 67
               

               Conread position:
               281-509
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               139, 61
               

               Conread position:
               312-509
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               318-509
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               125, 11
               

               Conread position:
               366-508
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 14
               

               Conread position:
               366-508
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               6, 111
               

               Conread position:
               366-509
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               366-509
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               372-509
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               373-509
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 44
               
Show alignments to all cow chromosomes.