Cow genome map
| Conread name: | rplun0138_k1.y1 |
| Conread position: | 1-126 |
| Cow position: | chr18:33336351-33336224 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 1-126 |
| Cow position: | chr18:54023639-54023763 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-129 |
| Cow position: | chr18:27987550-27987424 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-129 |
| Cow position: | chr18:54171051-54171177 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-133 |
| Cow position: | chr18:24700626-24700759 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 1-134 |
| Cow position: | chr18:33269314-33269178 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 1-139 |
| Cow position: | chr18:14130877-14130740 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 1-139 |
| Cow position: | chr18:14416464-14416326 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 1-139 |
| Cow position: | chr18:23798132-23797998 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 118, 31 |
| Conread position: | 1-139 |
| Cow position: | chr18:27837830-27837966 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-139 |
| Cow position: | chr18:36508819-36508683 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr18:32652685-32652548 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr18:37505547-37505409 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 118, 14 |
| Conread position: | 1-140 |
| Cow position: | chr18:52651404-52651265 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-160 |
| Cow position: | chr18:25351235-25351078 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 1-160 |
| Cow position: | chr18:28973416-28973575 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 2-139 |
| Cow position: | chr18:41840339-41840474 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 115, 32 |
| Conread position: | 2-216 |
| Cow position: | chr18:8169187-8168963 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 96, 32 |
| Conread position: | 3-112 |
| Cow position: | chr18:2019199-2019307 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-140 |
| Cow position: | chr18:40478867-40478728 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 115, 31 |
| Conread position: | 4-133 |
| Cow position: | chr18:17991937-17992067 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 19 |
| Conread position: | 4-164 |
| Cow position: | chr18:16534462-16534302 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 113, 30 |
| Conread position: | 8-203 |
| Cow position: | chr18:54004000-54003809 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 110, 26 |
| Conread position: | 58-509 |
| Cow position: | chr18:29237566-29237118 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 111-216 |
| Cow position: | chr18:51275565-51275669 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 243-509 |
| Cow position: | chr18:2886441-2886712 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 247-377 |
| Cow position: | chr18:29764901-29764764 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 247-505 |
| Cow position: | chr18:16842765-16843027 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 270-509 |
| Cow position: | chr18:35289871-35289626 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 281-509 |
| Cow position: | chr18:54270117-54269884 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 282-508 |
| Cow position: | chr18:16877998-16877779 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 366-509 |
| Cow position: | chr18:56462453-56462593 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 79, 69 |
| Conread position: | 369-509 |
| Cow position: | chr18:29763816-29763675 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 112 |
Show alignments to all cow chromosomes.