Cow genome map
| Conread name: | rplun0138_k1.y1 |
| Conread position: | 1-133 |
| Cow position: | chr19:40851947-40852080 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-134 |
| Cow position: | chr19:2273895-2274025 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-139 |
| Cow position: | chr19:75762-75904 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 1-139 |
| Cow position: | chr19:28581170-28581306 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-139 |
| Cow position: | chr19:39185055-39185191 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr19:5729320-5729179 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr19:7488802-7488663 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 29 |
| Conread position: | 1-140 |
| Cow position: | chr19:33873917-33873776 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-146 |
| Cow position: | chr19:438950-439093 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-149 |
| Cow position: | chr19:893117-893267 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-216 |
| Cow position: | chr19:27052025-27052241 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 90, 33 |
| Conread position: | 1-216 |
| Cow position: | chr19:39669019-39669244 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 118, 18 |
| Conread position: | 1-504 |
| Cow position: | chr19:162610-163111 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 347 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 117, 15 |
| Conread position: | 1-508 |
| Cow position: | chr19:352162-352676 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 352 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 117, 31 |
| Conread position: | 1-509 |
| Cow position: | chr19:136521-137042 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 352 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 2-141 |
| Cow position: | chr19:28376979-28376842 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 112, 32 |
| Conread position: | 2-509 |
| Cow position: | chr19:263637-263117 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 340 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 111, 5 |
| Conread position: | 3-132 |
| Cow position: | chr19:40817216-40817344 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 115, 31 |
| Conread position: | 3-217 |
| Cow position: | chr19:3138425-3138200 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 116, 31 |
| Conread position: | 4-133 |
| Cow position: | chr19:417149-417018 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 5-133 |
| Cow position: | chr19:32666010-32665880 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 104, 29 |
| Conread position: | 5-139 |
| Cow position: | chr19:39390995-39390863 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 114, 29 |
| Conread position: | 39-215 |
| Cow position: | chr19:43469-43282 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 79, 159 |
| Conread position: | 106-209 |
| Cow position: | chr19:44532831-44532729 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 211-509 |
| Cow position: | chr19:35377390-35377095 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 39, 90 |
| Conread position: | 243-508 |
| Cow position: | chr19:20126362-20126101 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 245-367 |
| Cow position: | chr19:6554382-6554252 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 318-509 |
| Cow position: | chr19:42648612-42648800 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 158 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 128, 46 |
| Conread position: | 366-492 |
| Cow position: | chr19:44532574-44532443 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 366-505 |
| Cow position: | chr19:32222989-32223130 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 79, 104 |
Show alignments to all cow chromosomes.