Cow genome map
| Conread name: | rplun0138_k1.y1 |
| Conread position: | 1-111 |
| Cow position: | chr22:12731282-12731391 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-124 |
| Cow position: | chr22:18815992-18816114 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-126 |
| Cow position: | chr22:326777-326901 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 73, 41 |
| Conread position: | 1-126 |
| Cow position: | chr22:36533346-36533472 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 1-134 |
| Cow position: | chr22:5308494-5308362 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-136 |
| Cow position: | chr22:18027666-18027533 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-139 |
| Cow position: | chr22:560311-560447 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 1-139 |
| Cow position: | chr22:13773287-13773152 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-139 |
| Cow position: | chr22:17328346-17328481 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-139 |
| Cow position: | chr22:42991565-42991430 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-139 |
| Cow position: | chr22:44396836-44396700 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-139 |
| Cow position: | chr22:44934370-44934237 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-140 |
| Cow position: | chr22:1522404-1522264 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr22:31334644-31334785 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr22:34168724-34168584 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr22:39469129-39469270 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-143 |
| Cow position: | chr22:537487-537346 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 1-143 |
| Cow position: | chr22:35671969-35672111 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 1-155 |
| Cow position: | chr22:19143298-19143451 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 32 |
| Conread position: | 1-160 |
| Cow position: | chr22:31313733-31313574 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-214 |
| Cow position: | chr22:11032139-11031926 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 113, 14 |
| Conread position: | 1-215 |
| Cow position: | chr22:44610289-44610080 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-216 |
| Cow position: | chr22:1322516-1322299 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 116, 33 |
| Conread position: | 1-216 |
| Cow position: | chr22:35907001-35907225 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 179 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 117, 22 |
| Conread position: | 1-216 |
| Cow position: | chr22:37132814-37132600 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 41, 122 |
| Conread position: | 1-218 |
| Cow position: | chr22:6502743-6502971 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 1-221 |
| Cow position: | chr22:1269400-1269630 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 84, 33 |
| Conread position: | 2-131 |
| Cow position: | chr22:48004926-48004797 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 115, 32 |
| Conread position: | 2-137 |
| Cow position: | chr22:15851707-15851573 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 116, 37 |
| Conread position: | 2-217 |
| Cow position: | chr22:13918221-13917998 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 6-139 |
| Cow position: | chr22:46853732-46853600 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 7-201 |
| Cow position: | chr22:310771-310573 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 7-216 |
| Cow position: | chr22:23854052-23853832 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 11-216 |
| Cow position: | chr22:44476254-44476044 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 21-506 |
| Cow position: | chr22:1282947-1283439 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 13 |
| Conread position: | 214-449 |
| Cow position: | chr22:33351669-33351439 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 243-509 |
| Cow position: | chr22:7278011-7277735 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 282-476 |
| Cow position: | chr22:308059-307861 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 86, 96 |
| Conread position: | 289-506 |
| Cow position: | chr22:36275755-36275546 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 310-509 |
| Cow position: | chr22:1048824-1048618 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 130 |
| Conread position: | 366-509 |
| Cow position: | chr22:11031323-11031177 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 366-509 |
| Cow position: | chr22:13917866-13917720 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 366-509 |
| Cow position: | chr22:23853692-23853547 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 69 |
| Conread position: | 367-509 |
| Cow position: | chr22:3306371-3306518 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 78, 68 |
| Conread position: | 373-509 |
| Cow position: | chr22:6503322-6503460 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
Show alignments to all cow chromosomes.