Cow genome map
| Conread name: | rplun0138_k1.y1 |
| Conread position: | 1-129 |
| Cow position: | chr4:12241091-12241217 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-129 |
| Cow position: | chr4:44725211-44725084 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 1-139 |
| Cow position: | chr4:6490238-6490374 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-139 |
| Cow position: | chr4:26886735-26886870 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-139 |
| Cow position: | chr4:31669398-31669262 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-139 |
| Cow position: | chr4:33493951-33493815 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-139 |
| Cow position: | chr4:43319520-43319656 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr4:356035-355895 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr4:16360008-16359869 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 130, 33 |
| Conread position: | 1-140 |
| Cow position: | chr4:17926128-17926269 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr4:25599376-25599516 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 33 |
| Conread position: | 1-140 |
| Cow position: | chr4:36896494-36896353 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr4:43881235-43881094 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-140 |
| Cow position: | chr4:45049172-45049313 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 1-160 |
| Cow position: | chr4:18517022-18516864 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 126, 33 |
| Conread position: | 1-160 |
| Cow position: | chr4:48026523-48026364 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 1-192 |
| Cow position: | chr4:34184394-34184595 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 1-216 |
| Cow position: | chr4:28831466-28831252 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 142, 33 |
| Conread position: | 1-216 |
| Cow position: | chr4:46664642-46664414 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 1-216 |
| Cow position: | chr4:60264038-60264257 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 2-143 |
| Cow position: | chr4:4416200-4416060 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 128, 32 |
| Conread position: | 3-140 |
| Cow position: | chr4:31565180-31565318 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 116, 31 |
| Conread position: | 4-140 |
| Cow position: | chr4:47717482-47717621 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 110, 35 |
| Conread position: | 7-134 |
| Cow position: | chr4:66926118-66925988 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 5, 28 |
| Conread position: | 12-215 |
| Cow position: | chr4:14550103-14549892 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 123, 18 |
| Conread position: | 211-505 |
| Cow position: | chr4:21565349-21565043 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 243-497 |
| Cow position: | chr4:27443792-27443534 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 53 |
| Conread position: | 274-509 |
| Cow position: | chr4:23493889-23493666 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 171, 24 |
| Conread position: | 279-507 |
| Cow position: | chr4:8597980-8598207 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 147, 26 |
| Conread position: | 366-509 |
| Cow position: | chr4:21337912-21338053 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 366-509 |
| Cow position: | chr4:60264473-60264618 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 79, 67 |
Show alignments to all cow chromosomes.