Cow genome map


           Conread name:
           rplun0138_k1.y1
        

               Conread position:
               1-128
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-129
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-131
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-133
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               116, 32
               

               Conread position:
               1-134
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-134
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-134
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-136
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               116, 41
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               188, 33
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               206, 33
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               120, 12
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               76, 33
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               199, 31
               

               Conread position:
               1-506
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 33
               

               Conread position:
               2-140
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               115, 32
               

               Conread position:
               2-222
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               112, 23
               

               Conread position:
               4-133
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-140
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               6-219
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               106, 7
               

               Conread position:
               7-139
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               112, 32
               

               Conread position:
               7-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               83, 27
               

               Conread position:
               13-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               106, 21
               

               Conread position:
               45-509
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 63
               

               Conread position:
               70-213
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 130
               

               Conread position:
               208-469
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 241
               

               Conread position:
               211-471
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               243-439
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 104
               

               Conread position:
               243-509
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               32, 61
               

               Conread position:
               243-509
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               244-509
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               265-445
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               281-399
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               281-509
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 153
               

               Conread position:
               298-503
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               78, 18
               

               Conread position:
               303-492
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               366-506
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               366-508
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               79, 102
               

               Conread position:
               373-504
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               72, 62
               

               Conread position:
               373-507
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 97
               

               Conread position:
               373-508
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 27
               
Show alignments to all cow chromosomes.