Cow genome map


           Conread name:
           rplun0138_k1.y1
        

               Conread position:
               1-129
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-131
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-133
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-133
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-134
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               118, 22
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               126, 14
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-142
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-145
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               101, 33
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               75, 32
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 33
               

               Conread position:
               1-168
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 32
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-509
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 12
               

               Conread position:
               2-139
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               2-140
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               125, 37
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               122, 31
               

               Conread position:
               4-161
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               4-161
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-214
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               102, 25
               

               Conread position:
               6-140
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-126
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               106, 26
               

               Conread position:
               15-161
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               94, 19
               

               Conread position:
               70-216
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 139
               

               Conread position:
               206-509
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               68, 158
               

               Conread position:
               211-509
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 209
               

               Conread position:
               242-507
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               14, 197
               

               Conread position:
               244-509
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               245-508
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               38, 9
               

               Conread position:
               245-509
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 103
               

               Conread position:
               248-501
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               249-509
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 122
               

               Conread position:
               270-509
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               274-509
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               9, 40
               

               Conread position:
               275-455
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               168, 150
               

               Conread position:
               281-509
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               164, 44
               

               Conread position:
               282-445
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               282-508
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               333-479
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 100
               

               Conread position:
               350-509
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 78
               

               Conread position:
               366-509
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               30, 0
               
Show alignments to all cow chromosomes.