Cow genome map


           Conread name:
           rplun0138_k1.y1
        

               Conread position:
               1-129
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-129
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               101, 33
               

               Conread position:
               1-131
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 41
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-141
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               117, 14
               

               Conread position:
               1-143
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-143
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-143
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-143
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-143
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-143
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               76, 32
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               117, 71
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               2-139
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               117, 9
               

               Conread position:
               2-147
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               2-214
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               115, 23
               

               Conread position:
               3-139
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               116, 36
               

               Conread position:
               3-161
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               3-161
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               112, 12
               

               Conread position:
               4-133
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               110, 35
               

               Conread position:
               4-141
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               51, 30
               

               Conread position:
               4-161
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               7-141
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               107, 27
               

               Conread position:
               9-160
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               110, 25
               

               Conread position:
               127-509
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               30, 23
               

               Conread position:
               238-392
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               242-509
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 14
               

               Conread position:
               243-506
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               39, 151
               

               Conread position:
               243-506
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 236
               

               Conread position:
               243-509
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 171
               

               Conread position:
               243-509
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 140
               

               Conread position:
               243-509
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 90
               

               Conread position:
               245-509
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               246-443
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               281-504
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               26, 105
               

               Conread position:
               281-509
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               281-509
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               109, 185
               

               Conread position:
               310-509
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               318-507
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               157, 39
               

               Conread position:
               320-509
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               125, 92
               

               Conread position:
               338-509
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               366-508
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 0
               
Show alignments to all cow chromosomes.