Cow genome map
| Conread name: | rrec30_n1.y1 |
| Conread position: | 1-166 |
| Cow position: | chr3:80582305-80582140 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 59, 144 |
| Conread position: | 1-177 |
| Cow position: | chr3:16897057-16897231 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 135, 42 |
| Conread position: | 1-213 |
| Cow position: | chr3:80929824-80930035 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 45 |
| Conread position: | 1-224 |
| Cow position: | chr3:16635425-16635197 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 51, 190 |
| Conread position: | 1-225 |
| Cow position: | chr3:16883872-16884096 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 135, 64 |
| Conread position: | 1-228 |
| Cow position: | chr3:76136774-76136538 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-230 |
| Cow position: | chr3:83699455-83699688 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 69, 172 |
| Conread position: | 1-231 |
| Cow position: | chr3:78546813-78547042 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 60, 78 |
| Conread position: | 1-245 |
| Cow position: | chr3:77467157-77466913 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 59, 163 |
| Conread position: | 1-253 |
| Cow position: | chr3:24621962-24621720 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 146, 30 |
| Conread position: | 1-263 |
| Cow position: | chr3:37982913-37983177 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 53, 235 |
| Conread position: | 1-264 |
| Cow position: | chr3:15655866-15656123 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 71, 48 |
| Conread position: | 1-278 |
| Cow position: | chr3:55129803-55129527 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 39, 186 |
| Conread position: | 1-284 |
| Cow position: | chr3:1483475-1483198 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 121 |
| Conread position: | 1-284 |
| Cow position: | chr3:3845526-3845797 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 1-284 |
| Cow position: | chr3:11659907-11659619 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 66, 231 |
| Conread position: | 1-284 |
| Cow position: | chr3:16114858-16114572 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 1-284 |
| Cow position: | chr3:76932450-76932728 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 2-184 |
| Cow position: | chr3:32403387-32403199 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-195 |
| Cow position: | chr3:13495044-13494837 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 50, 104 |
| Conread position: | 2-214 |
| Cow position: | chr3:27299095-27299305 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 2-262 |
| Cow position: | chr3:42500513-42500261 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 72, 143 |
| Conread position: | 2-284 |
| Cow position: | chr3:33469214-33469492 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 214 |
| Conread position: | 2-284 |
| Cow position: | chr3:57594349-57594063 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 147 |
| Conread position: | 3-262 |
| Cow position: | chr3:16868955-16869217 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 214 |
| Conread position: | 3-263 |
| Cow position: | chr3:15747123-15747378 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 48, 187 |
| Conread position: | 3-284 |
| Cow position: | chr3:11961547-11961264 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 34, 48 |
| Conread position: | 4-175 |
| Cow position: | chr3:76354901-76354724 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 4-213 |
| Cow position: | chr3:51235054-51235267 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 50, 100 |
| Conread position: | 4-224 |
| Cow position: | chr3:72603663-72603431 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 67, 46 |
| Conread position: | 4-260 |
| Cow position: | chr3:8451468-8451723 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 70, 46 |
| Conread position: | 4-278 |
| Cow position: | chr3:9591603-9591879 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 48, 143 |
| Conread position: | 4-284 |
| Cow position: | chr3:11278855-11278582 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 10-281 |
| Cow position: | chr3:21025967-21026238 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 128 |
| Conread position: | 10-284 |
| Cow position: | chr3:43316802-43317082 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 40, 221 |
| Conread position: | 10-284 |
| Cow position: | chr3:58064713-58064979 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 47 |
| Conread position: | 38-282 |
| Cow position: | chr3:77548227-77547989 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 70-284 |
| Cow position: | chr3:3715049-3714840 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 146 |
| Conread position: | 74-282 |
| Cow position: | chr3:21016424-21016628 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 66, 39 |
Show alignments to all cow chromosomes.