Cow genome map
| Conread name: | rrec30_n1.y1 |
| Conread position: | 1-134 |
| Cow position: | chr9:23438119-23437981 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-176 |
| Cow position: | chr9:56528643-56528462 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-213 |
| Cow position: | chr9:34675988-34676205 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 45, 126 |
| Conread position: | 1-228 |
| Cow position: | chr9:8727763-8727538 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 52, 60 |
| Conread position: | 1-231 |
| Cow position: | chr9:49259081-49259317 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 55, 204 |
| Conread position: | 1-233 |
| Cow position: | chr9:49151203-49151436 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 1-262 |
| Cow position: | chr9:24978266-24978523 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 30, 46 |
| Conread position: | 1-265 |
| Cow position: | chr9:41918478-41918734 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 50, 101 |
| Conread position: | 1-269 |
| Cow position: | chr9:32293633-32293378 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 144, 31 |
| Conread position: | 1-275 |
| Cow position: | chr9:44579799-44580072 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 222 |
| Conread position: | 1-278 |
| Cow position: | chr9:7019879-7019598 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 55, 103 |
| Conread position: | 1-284 |
| Cow position: | chr9:6373213-6373493 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 54, 128 |
| Conread position: | 1-284 |
| Cow position: | chr9:9558701-9558984 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 186 |
| Conread position: | 1-284 |
| Cow position: | chr9:22940974-22940677 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 53, 196 |
| Conread position: | 2-143 |
| Cow position: | chr9:47110654-47110518 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 2-284 |
| Cow position: | chr9:26124137-26123855 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 159 |
| Conread position: | 2-284 |
| Cow position: | chr9:36088948-36088676 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 186 |
| Conread position: | 3-283 |
| Cow position: | chr9:371803-372096 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 50, 228 |
| Conread position: | 3-284 |
| Cow position: | chr9:4284646-4284366 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 52, 157 |
| Conread position: | 3-284 |
| Cow position: | chr9:5608354-5608625 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 4-284 |
| Cow position: | chr9:23297493-23297767 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 56, 155 |
| Conread position: | 13-273 |
| Cow position: | chr9:9889549-9889285 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 51, 84 |
| Conread position: | 14-266 |
| Cow position: | chr9:24893296-24893531 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 57-274 |
| Cow position: | chr9:11286535-11286751 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 173 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 21, 167 |
| Conread position: | 75-269 |
| Cow position: | chr9:55891073-55890883 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 70, 129 |
| Conread position: | 92-284 |
| Cow position: | chr9:15987335-15987147 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 53, 110 |
Show alignments to all cow chromosomes.