Cow genome map
| Conread name: | rret16_o9.y1 |
| Conread position: | 216-469 |
| Cow position: | chr1:83185113-83184867 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 217-417 |
| Cow position: | chr1:98906439-98906636 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 187, 15 |
| Conread position: | 218-464 |
| Cow position: | chr1:53520772-53520531 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 237-450 |
| Cow position: | chr1:76938149-76938364 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 237-467 |
| Cow position: | chr1:58439200-58439420 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 238-458 |
| Cow position: | chr1:8532369-8532589 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 96, 13 |
| Conread position: | 238-465 |
| Cow position: | chr1:95017669-95017893 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 238-467 |
| Cow position: | chr1:81180133-81180369 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 239-432 |
| Cow position: | chr1:21678988-21678794 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 247-440 |
| Cow position: | chr1:37332432-37332625 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 247-467 |
| Cow position: | chr1:67577906-67577693 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 167 |
| Conread position: | 247-467 |
| Cow position: | chr1:82880503-82880287 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 41, 192 |
| Conread position: | 249-398 |
| Cow position: | chr1:100800192-100800042 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 33, 50 |
| Conread position: | 249-465 |
| Cow position: | chr1:55163759-55163543 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 37, 105 |
| Conread position: | 249-468 |
| Cow position: | chr1:34159668-34159450 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 260-467 |
| Cow position: | chr1:63240770-63240568 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 93, 0 |
Show alignments to all cow chromosomes.