Cow genome map


           Conread name:
           rret16_o9.y1
        

               Conread position:
               210-455
               

               Cow position:
               chr28:661993-661741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               148, 204
               

               Conread position:
               223-467
               

               Cow position:
               chr28:23840073-23839829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               238-401
               

               Cow position:
               chr28:7751455-7751619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr28:10616106-10616335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               247-467
               

               Cow position:
               chr28:29199564-29199343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               249-367
               

               Cow position:
               chr28:8103556-8103674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 55
               

               Conread position:
               249-410
               

               Cow position:
               chr28:3427028-3427189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               37, 105
               

               Conread position:
               249-467
               

               Cow position:
               chr28:9285542-9285748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               37, 74
               

               Conread position:
               249-469
               

               Cow position:
               chr28:4282656-4282879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               249-470
               

               Cow position:
               chr28:18591105-18590873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               40, 76
               

               Conread position:
               254-467
               

               Cow position:
               chr28:5792534-5792322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               32, 101
               

               Conread position:
               260-470
               

               Cow position:
               chr28:11451642-11451863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               26, 0
               
Show alignments to all cow chromosomes.