Cow genome map
| Conread name: | rret16_o9.y1 |
| Conread position: | 210-420 |
| Cow position: | chrX:616510-616720 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 218-467 |
| Cow position: | chrX:27446573-27446327 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 219-467 |
| Cow position: | chrX:42086744-42086498 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 220-465 |
| Cow position: | chrX:38963990-38963749 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 63, 12 |
| Conread position: | 229-362 |
| Cow position: | chrX:20151728-20151591 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 231-375 |
| Cow position: | chrX:35413508-35413358 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 237-458 |
| Cow position: | chrX:2523862-2524085 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 237-464 |
| Cow position: | chrX:17794853-17794634 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 238-375 |
| Cow position: | chrX:40647844-40647706 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 249-434 |
| Cow position: | chrX:33639828-33639634 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 37, 146 |
| Conread position: | 249-448 |
| Cow position: | chrX:26625820-26626030 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 249-458 |
| Cow position: | chrX:19690074-19689860 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 40, 61 |
| Conread position: | 249-463 |
| Cow position: | chrX:7382180-7381964 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 37, 149 |
| Conread position: | 249-467 |
| Cow position: | chrX:42470080-42470301 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 249-471 |
| Cow position: | chrX:34502775-34502554 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 249-472 |
| Cow position: | chrX:32747517-32747287 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 250-463 |
| Cow position: | chrX:42247328-42247536 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 32, 88 |
| Conread position: | 254-401 |
| Cow position: | chrX:19015294-19015144 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 265-467 |
| Cow position: | chrX:35409506-35409304 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 268-429 |
| Cow position: | chrX:15545732-15545571 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 18, 41 |
Show alignments to all cow chromosomes.